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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2018 Jan 20

Fold library idPDB HeaderMoleculeTitle
c6ehiI_ 1.58 dna binding protein Chain: I: nuclease nuct;
c6eu0V_ 4.00 transcription Chain: V: transcription factor tfiiib component b'';
c5mr5B_ 2.00 signaling protein Chain: B: neurturin;
c6bwcA_ 2.70 biosynthetic protein Chain: A: polysaccharide biosynthesis protein capd;
c6f1to_ 3.50 motor protein Chain: O: dynactin subunit 3;
c5v6fA_ 1.50 sugar binding protein Chain: A: hemolysin-related protein;
c6f42V_ 5.50 transcription Chain: V: transcription factor iiib 70 kda subunit;
c5mpiA_ 2.35 transcription Chain: A: grainyhead-like protein 1 homolog;
c6eznE_ 3.30 membrane protein Chain: E: dolichyl-diphosphooligosaccharide--protein
c5lcpB_ 1.43 transferase Chain: B: camp-dependent protein kinase inhibitor alpha;
c6f1yj_ 3.40 motor protein Chain: J:
c6f40W_ 3.70 transcription Chain: W: transcription factor tfiiib component b'';
c6b8hb_ 3.60 membrane protein Chain: B: atp synthase subunit alpha, mitochondrial;
c5wxvL_ 2.30 lyase Chain: L: isochorismate lyase;
c6bs7A_ 1.95 ligase Chain: A: adenylosuccinate synthetase;
c5gziB_ 2.17 lyase Chain: B: lysine cyclodeaminase;
c5wk1C_ 3.60 virus Chain: C: major capsid protein;
c6feuJ_ 3.00 oxidoreductase Chain: J: peroxiredoxin;
c6b8hd_ 3.60 membrane protein Chain: D: atp synthase subunit beta, mitochondrial;
c5n2bB_ 1.90 immune system Chain: B: putative fimbrial subunit type 1;
c6f4aB_ 3.55 hydrolase Chain: B: suv3 helicase;
c5mruA_ 2.55 transcription Chain: A: tetracycline repressor, class a;
c5yqzP_ 3.00 signaling protein/hydrolase Chain: P: glucagon analogue;
c6f1cC_ 4.20 hydrolase Chain: C: complement c1r subcomponent;
c6f1uf_ 3.40 motor protein Chain: F: arp1 actin related protein 1 homolog a;
c6eznH_ 3.30 membrane protein Chain: H: dolichyl-diphosphooligosaccharide--protein
c5mr4C_ 2.40 signaling protein Chain: C: gdnf family receptor alpha-2;
c6eznC_ 3.30 membrane protein Chain: C: dolichyl-diphosphooligosaccharide--protein
c6fd2B_ 2.55 biosynthetic protein Chain: B: putative apramycin biosynthetic oxidoreductase 4;
c6f1ux_ 3.40 motor protein Chain: X: bicd family-like cargo adapter 1;
c5vztB_ 2.70 cell cycle Chain: B: f-box only protein 31;
c6exnD_ 3.70 splicing Chain: D: pre-mrna-splicing factor cwc16;
c5mrtA_ 1.60 hydrolase Chain: A: lytic endopeptidase preproenzyme;
c6exnc_ 3.70 splicing Chain: C: pre-mrna-splicing factor snu114;
c6f1ud_ 3.40 motor protein Chain: D: arp1 actin related protein 1 homolog a;
c5ui3C_ 2.00 lyase Chain: C: dihydrodipicolinate synthase;
c6eznA_ 3.30 membrane protein Chain: A: dolichyl-diphosphooligosaccharide--protein
c6bymA_ 2.20 lipid transport Chain: A: sterol-binding protein;
c5no7B_ 3.01 oxidoreductase Chain: B: uncharacterized protein;
c5wk1L_ 3.60 virus Chain: L: capsid stabilizing protein;
c5mrjA_ 2.70 hydrolase Chain: A: beta-xylanase;
c5ntuB_ 2.58 signaling protein Chain: B: growth/differentiation factor 8;
c6f1tf_ 3.50 motor protein Chain: F: arp1 actin related protein 1 homolog a;
c6f42W_ 5.50 transcription Chain: W: transcription factor tfiiib component b'';
c6eqtA_ 2.74 dna binding protein Chain: A: centromere protein n;
c5vxvA_ 1.55 membrane protein Chain: A: peroxisomal membrane protein pex15;
c5mrvB_ 1.85 hydrolase Chain: B: carboxypeptidase o;
c6eznF_ 3.30 membrane protein Chain: F: dolichyl-diphosphooligosaccharide--protein
c5o31p_ 4.13 oxidoreductase Chain: P: nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
c5ovnB_ 2.94 viral protein Chain: B: pol protein;
c6f40P_ 3.70 transcription Chain: P: dna-directed rna polymerase iii subunit rpc6;
c6f1td_ 3.50 motor protein Chain: D: arp1 actin related protein 1 homolog a;
c5y00A_ 1.60 fluorescent protein Chain: A: green fluorescent protein;
c6bs9A_ 2.32 transport protein Chain: A: stage iii sporulation protein ab;
c5vqdA_ 2.10 hydrolase Chain: A: beta-glucoside phosphorylase bglx;
c5v7pA_ 2.30 transferase Chain: A: protein-s-isoprenylcysteine o-methyltransferase;
c5wxzA_ 2.80 isomerase Chain: A: mcyf;
c5opzB_ 1.34 hydrolase Chain: B: chix;
c5vooB_ 2.40 transferase Chain: B: 5-methyltetrahydrofolate homocysteine s-methyltransferase;
c6b8hx_ 3.60 membrane protein Chain: X: atp synthase subunit alpha, mitochondrial;
c5whqA_ 2.90 oxidoreductase Chain: A: catalase-peroxidase;
c5o31Z_ 4.13 oxidoreductase Chain: Z: nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
c5ymaA_ 3.30 ribosomal protein Chain: A: putative rrna processing protein;
c6b8ho_ 3.60 membrane protein Chain: O: atp synthase subunit 5, mitochondrial;
c6f3hB_ 2.70 hydrolase Chain: B: exoribonuclease ii, mitochondrial;
c5wzeC_ 1.78 hydrolase Chain: C: aminopeptidase p;
c6f1tx_ 3.50 motor protein Chain: X: bicd family-like cargo adapter 1,bicd family-like cargo
c5lctB_ 1.62 transferase Chain: B: camp-dependent protein kinase inhibitor alpha;
c5xzoA_ 1.50 hydrolase Chain: A: beta-xylanase;
c6eznB_ 3.30 membrane protein Chain: B: dolichyl-diphosphooligosaccharide--protein
c6f1tX_ 3.50 motor protein Chain: X: bicd family-like cargo adapter 1,bicd family-like cargo
c5y2aA_ 1.90 hydrolase Chain: A: insect group ii chitinase;
c5ytiA_ 2.75 structural protein Chain: A: flagellar hook associated protein type 3 flgl;
c5lcrB_ 1.57 transferase Chain: B: camp-dependent protein kinase inhibitor alpha;
c6ei9A_ 2.55 flavoprotein Chain: A: trna-dihydrouridine synthase b;
c5o5gA_ 3.03 signaling protein Chain: A: roundabout homolog 1;
c5wxeA_ UNK unknown function Chain: A: jasmintide js3;
c5lyeA_ 1.90 structural protein Chain: A: gp12;
c6b8ht_ 3.60 membrane protein Chain: T: atp synthase subunit 9, mitochondrial;
c5lcuB_ 1.58 transferase Chain: B: camp-dependent protein kinase inhibitor alpha;
c5y2bA_ 2.20 hydrolase Chain: A: insect group ii chitinase;
c6b8hk_ 3.60 membrane protein Chain: K: atp synthase subunit alpha, mitochondrial;
c5o31i_ 4.13 oxidoreductase Chain: I: nadh dehydrogenase [ubiquinone] iron-sulfur protein 8,
c5ovnA_ 2.94 viral protein Chain: A: pol protein;
c6eznG_ 3.30 membrane protein Chain: G: dolichyl-diphosphooligosaccharide--protein
c5wybB_ 2.25 isomerase Chain: B: probable enoyl-coa hydratase/isomerase;
c5o31b_ 4.13 oxidoreductase Chain: B: nadh dehydrogenase [ubiquinone] iron-sulfur protein 7,
c6bwlA_ 1.45 lyase Chain: A: pal;
c6eu1Q_ 3.40 transcription Chain: Q: dna-directed rna polymerase iii subunit rpc7;
c6bn2A_ 1.65 transferase Chain: A: acetyl-coa acetyltransferase;
c6f1yf_ 3.40 motor protein Chain: F:
c6f38d_ 6.70 motor protein Chain: D: arp1 actin related protein 1 homolog a;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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