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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6f1uf_

Fold library idPDB HeaderMoleculeTitle
c6f1uf_3.40PDB header: motor proteinChain: F: PDB Molecule: arp1 actin related protein 1 homolog a;


Added to library: Sat Jan 20 10:38:55 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EIPEISLPIHPMITNVAKQCYERGEKPKVTDFGDKVEDPTFLNQLQSGVNRWIREIQKVTKLDRDPASGT
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T
SS

SSSSGGGS

S



TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALQEISFWLNLERALYRIQEKRESPEVLLTLDILKHGKRFHATVSFDTDTGLKQALETVNDYNPLMKDFP
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Known secondary structure (DSSP) STT
T
TTTTTSS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence LNDLLSATELDKIRQALVAIFTHLRKIRNTKYPIQRALRLVEAISRDLSSQLLKVLGTRKLMHVAYEEFE
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Known secondary structure (DSSP) TT

STTTTTTTT

TT
TTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KVMVACFEVFQTWDDEYEKLQVLLRDIVKRKREENLKMVWRINPAHRKLQARLDQMRKFRRQHEQLRAVI
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Known secondary structure (DSSP) STTT









 .........290.........300.........310.........320.........330.........340.........350
Sequence VRVANAIEEVNLAYENVKEVDGLDVSKEGTEAWEAAMKRYDERIDRVETRITARLRDQLGTAKNANEMFR
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Known secondary structure (DSSP)


TTTT
GGG
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IFSRFNALFVRPHIRGAIREYQTQLIQRVKDDIESLHDKFKVQYPQSQACKMSHVRDLPPVSGSIIWAKQ
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Known secondary structure (DSSP)
SGGGG
TTTS
TTTSTT

 .........430.........440.........450.........460.........470.........480.........490
Sequence IDRQLTAYMKRVEDVLGKGWENHVEGQKLKQDGDSFRMKLNTQEIFDDWARKVQQRNLGVSGRIFTIEST
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Known secondary structure (DSSP) TTTTTTSSSS

TTTTTTTTTTTS


B
 .........500.........510.........520.........530.........540.........550.........560
Sequence RVRGRTGNVLKLKVNFLPEIITLSKEVRNLKWLGFRVPLAIVNKAHQANQLYPFAISLIESVRTYERTCE
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Known secondary structure (DSSP)

B
STT
B


B
S
SST




TT
 .........570.........580.........590......
Sequence KVEERNTISLLVAGLKKEVQALIAEGIALVWESYKL
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Known secondary structure (DSSP) T
SS



SS


Download:PDB structure FASTA sequence

Hidden Markov model

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Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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