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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6eznH_

Fold library idPDB HeaderMoleculeTitle
c6eznH_3.30PDB header: membrane proteinChain: H: PDB Molecule: dolichyl-diphosphooligosaccharide--protein


Added to library: Sat Jan 20 10:43:25 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QDVHVSFPSTAGKSRVMIGKVEPRIGIDETVPTTITVEDPNEVIQVNFAIESTNKPFQNTLLIGLPNKNL
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Known secondary structure (DSSP)

SS




SS




B



S


S









SS






S

SS
BTTTTB
 .........80.........90.........100.........110.........120.........130.........140
Sequence EMAFEPEIKDNGKLSMYKYRIDLAKLDAALLQEASRSPEPIKATLILASSTAKPKENLFREILQLNLNFD
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TT

SSSS
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SSSS






 .........150.........160.........170.........180.........190.........200.........210
Sequence VDHSDSDKFGIKPEIHHIFHAEPKRVAKPIAVIFVLIIFITILSLIVTWLNSCAAAFNNIPTGVTAVYFL
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TTTS







STT
 .........220.........230.........240.........250.........
Sequence GFIATIVGFEVIFARYYLGTSIFETLFSSLYLGAPGLLTSTKFLRSFGQ
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Known secondary structure (DSSP) SS

TTTTT



Download:PDB structure FASTA sequence

Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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