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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5lyeA_

Fold library idPDB HeaderMoleculeTitle
c5lyeA_1.90PDB header: structural proteinChain: A: PDB Molecule: gp12;


Added to library: Sat Jan 20 08:44:15 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATESVYGLTRYSTNDEAIAGVNNESSITPAKFTVALNNVFETPYTFMNSTATEEYKGVIKLGTQSEVNSN
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Known secondary structure (DSSP)

SSS




B

STT

SSB

TTTTT


TTTTS


SS





B

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NASVAVTGATLNGRGSTTSMRGVVKLTTTAGSQSGGDASSALAWNADVIHQRGGQTINGTLRINNTLTIA
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Known secondary structure (DSSP)
SSSB

SB

SSS

B
SSTT

BTTBSS
TTSS


SS




SS



SS




 .........150.........160.........170.........180.........190.........200.........210
Sequence SGGANITGTVNMTGGYIQGKRVVTQNEIDRTIPVGAIMMWAADSLPSDAWRFCHGGTVSASDCPLYASRI
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Known secondary structure (DSSP) SS



SS



S

TT


GGGS
TT

SSS
S
TTSBS
B

TTT
 .........220.........230......
Sequence GTRYGGSSSNPGLPDMRLNYIIKVKE
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SS confidence

























Known secondary structure (DSSP) TTTTSB
SSSBB

B






Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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