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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2017 Dec 30

Fold library idPDB HeaderMoleculeTitle
c5wvbA_ 3.10 hydrolase Chain: A: chitinase;
c6em3J_ 3.20 ribosome Chain: J: rrna-processing protein ebp2;
c5y2wA_ 2.20 transcription Chain: A: rubisco operon transcriptional regulator;
c5ud6B_ 2.40 lyase Chain: B: dihydrodipicolinate synthase;
c6emwD_ 11.00 chaperone Chain: D: atp-dependent clp protease atp-binding subunit clpc;
c5xtwH_ 3.20 sugar binding protein Chain: H: macrophage mannose receptor 1;
c6em8H_ 8.40 chaperone Chain: H: atp-dependent clp protease atp-binding subunit clpc;
c5uazB_ 1.75 protein transport Chain: B: nucleoporin nup53;
c6em5o_ 4.30 ribosome Chain: O: 60s ribosomal protein l16-a;
c6em5I_ 4.30 ribosome Chain: I: nucleolar complex-associated protein 3;
c6em5v_ 4.30 ribosome Chain: V: 60s ribosomal protein l23-a;
c5y2vA_ 2.60 transcription Chain: A: rubisco operon transcriptional regulator;
c6bwtD_ 2.45 oxidoreductase Chain: D: thioredoxin reductase;
c6em3x_ 3.20 ribosome Chain: X:
c5xftA_ 2.46 oxidoreductase Chain: A: dehydroascorbate reductase;
c5onaF_ 2.70 gene regulation Chain: F: protein bag-of-marbles;
c6em5r_ 4.30 ribosome Chain: R: 60s ribosomal protein l19-a;
c6emfA_ 2.65 ribosome Chain: A: g0s4m2;
c5n7nB_ 2.30 hydrolase Chain: B: putative cathepsin d;
c5wusA_ 2.20 hydrolase Chain: A: chitinase;
c6emwg_ 11.00 chaperone Chain: G: atp-dependent clp protease atp-binding subunit clpc;
c5oarB_ 2.30 hydrolase Chain: B: beta-hexosaminidase;
c5udmA_ 2.64 hydrolase Chain: A: phage-associated cell wall hydrolase;
c6emwX_ 11.00 chaperone Chain: X: atp-dependent clp protease atp-binding subunit clpc;
c6em8E_ 8.40 chaperone Chain: E: atp-dependent clp protease atp-binding subunit clpc;
c5n6rA_ UNK signaling protein Chain: A: breakpoint cluster region protein;
c5yvmA_ 2.12 oxidoreductase Chain: A: alcohol dehydrogenase;
c5y9wC_ 1.85 transferase Chain: C: protein lure 1.2;
c6bpzC_ 3.80 membrane protein Chain: C: piezo-type mechanosensitive ion channel component 1,piezo-
c6bfca_ 3.70 hydrolase/hormone Chain: A: insulin-degrading enzyme;
c6em5J_ 4.30 ribosome Chain: J: rrna-processing protein ebp2;
c6em5z_ 4.30 ribosome Chain: Z: 60s ribosomal protein l27-a;
c5ye2B_ 5.80 membrane protein Chain: B: mammalian endo-lysosomal trpml1 channel;
c5x5iC_ 2.55 transcription Chain: C: hth-type transcriptional regulator rcda;
c6be6D_ 2.80 membrane protein Chain: D: disintegrin and metalloproteinase domain-containing protein
c6avwA_ 2.14 hydrolase Chain: A: carboxylesterase sober1;
c5oarC_ 2.30 hydrolase Chain: C: beta-hexosaminidase;
c5vgtA_ 1.78 viral protein Chain: A: gene 7 protein;
c6em8F_ 8.40 chaperone Chain: F: atp-dependent clp protease atp-binding subunit clpc;
c6em3D_ 3.20 ribosome Chain: D: atp-dependent rna helicase has1;
c6em5m_ 4.30 ribosome Chain: M: 60s ribosomal protein l14-a;
c5ubvB_ 2.45 hydrolase Chain: B: atpase domain of i-aaa protease;
c6bhuA_ 3.14 transport protein Chain: A: multidrug resistance-associated protein 1;
c5onbD_ 3.00 gene regulation Chain: D: protein bag-of-marbles;
c6em34_ 3.20 ribosome Chain: 4: ribosomal rna-processing protein 1;
c6em4u_ 4.10 ribosome Chain: U:
c5yknA_ 2.30 gene regulation Chain: A: probable lysine-specific demethylase jmj14;
c6em4A_ 4.10 ribosome Chain: A: ribosome biogenesis protein brx1;
c5onbB_ 3.00 gene regulation Chain: B: protein bag-of-marbles;
c6em3K_ 3.20 ribosome Chain: K: proteasome-interacting protein cic1;
c6bgiA_ 3.80 membrane protein Chain: A: anoctamin-1;
c6em5p_ 4.30 ribosome Chain: P: 60s ribosomal protein l17-a;
c6em5b_ 4.30 ribosome Chain: B: 60s ribosomal protein l3;
c5tfmA_ 2.92 cell adhesion Chain: A: cadherin-23;
c6em53_ 4.30 ribosome Chain: 3: protein mak16;
c5xhbA_ 1.90 immune system Chain: A: nisin immunity protein;
c6em5s_ 4.30 ribosome Chain: S: 60s ribosomal protein l20-a;
c6em4n_ 4.10 ribosome Chain: N: 60s ribosomal protein l15-a;
c5oc7A_ 1.65 signaling protein Chain: A: breakpoint cluster region protein,pleckstrin-homology
c6em5l_ 4.30 ribosome Chain: L: 60s ribosomal protein l13-a;
c5y63E_ 2.87 oxidoreductase Chain: E: alkyl hydroperoxide reductase, c subunit;
c6b70a_ 3.70 hydrolase/immune system/hormone Chain: A: insulin-degrading enzyme;
c6avyA_ 2.24 hydrolase Chain: A: acyl-protein thioesterase 2;
c6em5w_ 4.30 ribosome Chain: W: ribosome assembly factor mrt4;
c6em5n_ 4.30 ribosome Chain: N: 60s ribosomal protein l15-a;
c6bfcb_ 3.70 hydrolase/hormone Chain: B: insulin-degrading enzyme;
c6buaA_ 7.10 rna binding protein Chain: A: dicer-2, isoform a;
c6ercA_ 2.50 oxidoreductase Chain: A: peroxinectin a;
c5x56A_ 1.85 photosynthesis Chain: A: photosystem ii repair protein psb27-h1, chloroplastic;
c6em5A_ 4.30 ribosome Chain: A: ribosome biogenesis protein brx1;
c6bdcA_ 2.50 protein transport Chain: A: hcp1;
c5onbF_ 3.00 gene regulation Chain: F: protein bag-of-marbles;
c6em5q_ 4.30 ribosome Chain: Q: 60s ribosomal protein l18-a;
c5y9wA_ 1.85 transferase Chain: A: pollen receptor-like kinase 6;
c5h5yB_ 2.30 transferase Chain: B: non-lee encoded effector protein nleb;
c6bu9A_ 6.80 rna binding protein/rna Chain: A: dicer-2, isoform a;
c5n5bA_ UNK structural protein Chain: A: microtubule-associated protein tau;
c5ys2C_ 2.70 viral protein Chain: C: envelope glycoprotein b,envelope glycoprotein b;
c5onaC_ 2.70 gene regulation Chain: C: protein bag-of-marbles;
c5onbH_ 3.00 gene regulation Chain: H: protein bag-of-marbles;
c5n5aA_ UNK structural protein Chain: A: microtubule-associated protein tau;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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