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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6em8E_

Fold library idPDB HeaderMoleculeTitle
c6em8E_8.40PDB header: chaperoneChain: E: PDB Molecule: atp-dependent clp protease atp-binding subunit clpc;


Added to library: Sat Dec 30 08:42:02 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLITLHYTP
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Known secondary structure (DSSP)


STTTTTT

SSS
SSTT

SSS




SSTTTTS






T
 .........80.........90.........100.........110.........120.........130.........140
Sequence RAKKVIELSMDEARKLHHNFVGTEHILLGLNEGVAARVFANLDLNITKARAQVVKALGNPEMSNKNAQAS
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Known secondary structure (DSSP) TTTTTTTTTT

S

TT



S

SSS


S

SSS

TT

S
S



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence KSNNTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVN
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Known secondary structure (DSSP) TT




TTSB
TTTTGGGS
S


SS
TTTTTSSS

SSTTSSST
 .........220.........230.........240.........250.........260.........270.........280
Sequence NEVPETLKDKRVMSLDMGTVGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAASNILKPALARGELQCI
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Known secondary structure (DSSP) T


TTSSS

B







SSTTTSSS



S








SSSTS




 .........290.........300.........310.........320.........330.........340.........350
Sequence GATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYV
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Known secondary structure (DSSP)



SSTTTTT






TT



S
 .........360.........370.........380.........390.........400.........410.........420
Sequence SDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQ
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Known secondary structure (DSSP) SSS
SS



TTTSS





TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence YEEAKNEWKNAQGMSTSLSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKA
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Known secondary structure (DSSP) TTGGG


SS

SSS




TTT

SSSTTTTTTTS


 .........500.........510.........520.........530.........540.........550.........560
Sequence VRRARAGLKDPKRGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPHDDG
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Known secondary structure (DSSP) TTS
SSSSS
S



S
S
S
TTT

GGGB



SSSSSSSGGGTTS








 .........570.........580.........590.........600.........610.........620.........630
Sequence GQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQR
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Known secondary structure (DSSP)

SSSS





GGGS
TBTTB


SS




SSS







STT
 .........640.........650.........660....
Sequence GQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFH
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Known secondary structure (DSSP)


TTTTS
TS
S


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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