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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6em5n_

Fold library idPDB HeaderMoleculeTitle
c6em5n_4.30PDB header: ribosomeChain: N: PDB Molecule: 60s ribosomal protein l15-a;


Added to library: Sat Dec 30 08:31:12 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRIKKKNTRGNARNFITRSQAVRKLQVSLADFRRLCIFKGIYPREPRNKKKANKGSTAPTTFYYAKDIQY
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Known secondary structure (DSSP)




GGGSTTTTTT

T





S
TTS





 .........80.........90.........100.........110.........120.........130.........140
Sequence LMHEPVLAKFREHKTFARKLTRALGRGEVSSAKRLEENRDSYTLDHIIKERYPSFPDAIRDIDDALNMLF
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Known secondary structure (DSSP) SS
T

T





STT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LFSNLPSTNQVSSKIINDAQKICNQWLAYVAKERLVRKVFVSIKGVYYQANIKGEEVRWLVPFKFPENIP
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Known secondary structure (DSSP) S



SSS
TT



SS

SSSS


SS




 .........220.........230.........240.........250.........260.........270.........280
Sequence SDVDFRIMLTFLEFYSTLLHFVLYKLYTDSGLIYPPKLDLKKDKIISGLSSYILESRYDSPVASLFSAFV
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Known secondary structure (DSSP) SSS
TTS

SS



TTTSSSSSS






STTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FYVSREVPIDILEFLILSCGGNVISEAAMDSKVTHQIVDRPVLKNKVAGRTYIQPQWIFDCINKGELVPA
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Known secondary structure (DSSP)
SSS
STTTT
SGGG







SS
S


SSS
GGGSS


G
 .........360.........370.........380.........390.........400.........410.
Sequence NKYLPGEALPPHLSPWEEKKLKMIMMSNKQKKLYKKMKYSNAKKEEQAENLKKKKKQIAKQ
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Known secondary structure (DSSP) GG

TTS










TTTTTTTS
T


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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