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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6em5q_

Fold library idPDB HeaderMoleculeTitle
c6em5q_4.30PDB header: ribosomeChain: Q: PDB Molecule: 60s ribosomal protein l18-a;


Added to library: Sat Dec 30 08:33:51 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YVDRLLKDICEYFGYTPFLAEKLFNLFSPAEAMEFFEANEIARPITIRTNTLKTRRRDLAQTLVNRGVNL
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Known secondary structure (DSSP)
TTTTTT


TTTT

TTSGGGTTT




TTT

GGGTTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence QPIGSWTKVGLQIFDSQVPIGATPEYLAGHYILQAASSFLPVIALDPHENERILDMAAAPGGKTTYISAM
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Known secondary structure (DSSP)
SSS
TTB



S
TTTSTS
GGGTS


TT
S

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MKNTGCVFANDANKSRTKSLIANIHRLGCTNTIVCNYDAREFPKVIGGFDRILLDAPCSGTGVIGKDQSV
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Known secondary structure (DSSP) TTS
S

S
TTTT






STT
TTT


SS



SS


TTT
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence KVSRTEKDFIQIPHLQKQLLLSAIDSVGVIVYSTCSVAVEEDEAVIDYALRKRPNVKLVDTGLAIGKEAF
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Known secondary structure (DSSP)


TTT

S

STTTSSSS
TT



SS

B


 .........290.........300.........310.......
Sequence TSYRGKKFHPSVKLARRYYPHTYNVDGFFVAKFQKIG
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Known secondary structure (DSSP) S

SS



SS
SSS

TTTSSS




Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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