Emaill.a.kelley@imperial.ac.uk
DescriptionP37902
DateThu Jan 5 11:57:43 GMT 2012
Unique Job IDb5b984b7bb33ab28

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c2vhaB_



100.0 99 PDB header:transport protein
Chain: B: PDB Molecule:periplasmic binding transport protein;
PDBTitle: debp
2c3hv1A_



100.0 20 PDB header:transport protein
Chain: A: PDB Molecule:polar amino acid abc uptake transporter substrate
PDBTitle: crystal structure of a polar amino acid abc uptake2 transporter substrate binding protein from streptococcus3 thermophilus
3c2ylnA_



100.0 16 PDB header:transport protein
Chain: A: PDB Molecule:putative abc transporter, periplasmic binding protein,
PDBTitle: crystal structure of the l-cystine solute receptor of2 neisseria gonorrhoeae in the closed conformation
4c2ieeB_



100.0 15 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:probable abc transporter extracellular-binding
PDBTitle: crystal structure of yckb_bacsu from bacillus subtilis.2 northeast structural genomics consortium target sr574.
5c3k4uA_



100.0 22 PDB header:transport protein
Chain: A: PDB Molecule:binding component of abc transporter;
PDBTitle: crystal structure of putative binding component of abc transporter2 from wolinella succinogenes dsm 1740 complexed with lysine
6c3g41A_



100.0 16 PDB header:transport protein
Chain: A: PDB Molecule:amino acid abc transporter, periplasmic amino acid-binding
PDBTitle: the structure of cpn0482, the arginine binding protein from the2 periplasm of chlamydia pneumoniae
7c1xt8B_



100.0 21 PDB header:transport protein
Chain: B: PDB Molecule:putative amino-acid transporter periplasmic solute-binding
PDBTitle: crystal structure of cysteine-binding protein from campylobacter2 jejuni at 2.0 a resolution
8c2v25B_



100.0 24 PDB header:receptor
Chain: B: PDB Molecule:major cell-binding factor;
PDBTitle: structure of the campylobacter jejuni antigen peb1a, an2 aspartate and glutamate receptor with bound aspartate
9c2yjpB_



100.0 24 PDB header:transport protein
Chain: B: PDB Molecule:putative abc transporter, periplasmic binding protein,
PDBTitle: crystal structure of the solute receptors for l-cysteine of2 neisseria gonorrhoeae
10d1hsla_



100.0 21 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
11c3kbrA_



100.0 21 PDB header:lyase
Chain: A: PDB Molecule:cyclohexadienyl dehydratase;
PDBTitle: the crystal structure of cyclohexadienyl dehydratase precursor from2 pseudomonas aeruginosa pa01
12d1xt8a1



100.0 21 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
13c2q89A_



100.0 18 PDB header:transport protein
Chain: A: PDB Molecule:putative abc transporter amino acid-binding protein;
PDBTitle: crystal structure of ehub in complex with hydroxyectoine
14d1lsta_



100.0 20 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
15c3delC_



100.0 15 PDB header:protein binding, transport protein
Chain: C: PDB Molecule:arginine binding protein;
PDBTitle: the structure of ct381, the arginine binding protein from the2 periplasm chlamydia trachomatis
16c2q2aD_



100.0 23 PDB header:transport protein
Chain: D: PDB Molecule:artj;
PDBTitle: crystal structures of the arginine-, lysine-, histidine-2 binding protein artj from the thermophilic bacterium3 geobacillus stearothermophilus
17c3h7mA_



100.0 16 PDB header:transferase
Chain: A: PDB Molecule:sensor protein;
PDBTitle: crystal structure of a histidine kinase sensor domain with2 similarity to periplasmic binding proteins
18c2o1mB_



100.0 15 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:probable amino-acid abc transporter
PDBTitle: crystal structure of the probable amino-acid abc2 transporter extracellular-binding protein ytmk from3 bacillus subtilis. northeast structural genomics4 consortium target sr572
19c3i6vA_



100.0 16 PDB header:transport protein
Chain: A: PDB Molecule:periplasmic his/glu/gln/arg/opine family-binding protein;
PDBTitle: crystal structure of a periplasmic his/glu/gln/arg/opine family-2 binding protein from silicibacter pomeroyi in complex with lysine
20c3r39A_



100.0 12 PDB header:transport protein
Chain: A: PDB Molecule:putative periplasmic binding protein;
PDBTitle: crystal structure of periplasmic d-alanine abc transporter from2 salmonella enterica
21c2y7iB_



not modelled 100.0 20 PDB header:arginine-binding protein
Chain: B: PDB Molecule:stm4351;
PDBTitle: structural basis for high arginine specificity in salmonella2 typhimurium periplasmic binding protein stm4351.
22c3kzgB_



not modelled 100.0 19 PDB header:transport protein
Chain: B: PDB Molecule:arginine 3rd transport system periplasmic binding
PDBTitle: crystal structure of an arginine 3rd transport system2 periplasmic binding protein from legionella pneumophila
23d1wdna_



not modelled 100.0 23 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
24d2a5sa1



not modelled 100.0 19 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
25c3mplA_



not modelled 100.0 12 PDB header:signaling protein
Chain: A: PDB Molecule:virulence sensor protein bvgs;
PDBTitle: crystal structure of bordetella pertussis bvgs vft2 domain (double2 mutant f375e/q461e)
26d1mqia_



not modelled 100.0 17 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
27c2xx7B_



not modelled 100.0 16 PDB header:transport protein
Chain: B: PDB Molecule:glutamate receptor 2;
PDBTitle: crystal structure of 1-(4-(1-pyrrolidinylcarbonyl)phenyl)-3-2 (trifluoromethyl)-4,5,6,7-tetrahydro-1h-indazole in complex with3 the ligand binding domain of the rat glua2 receptor and glutamate4 at 2.2a resolution.
28d1pb7a_



not modelled 100.0 19 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
29c2rc9A_



not modelled 100.0 23 PDB header:membrane protein
Chain: A: PDB Molecule:glutamate [nmda] receptor subunit 3a;
PDBTitle: crystal structure of the nr3a ligand binding core complex with acpc at2 1.96 angstrom resolution
30d1ii5a_



not modelled 100.0 17 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
31d1s50a1



not modelled 100.0 15 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
32c2pyyB_



not modelled 100.0 21 PDB header:transport protein
Chain: B: PDB Molecule:ionotropic glutamate receptor bacterial homologue;
PDBTitle: crystal structure of the glur0 ligand-binding core from nostoc2 punctiforme in complex with (l)-glutamate
33c2v3tA_



not modelled 100.0 15 PDB header:receptor
Chain: A: PDB Molecule:glutamate receptor delta-2 subunit synonym
PDBTitle: structure of the ligand-binding core of the ionotropic2 glutamate receptor-like glurdelta2 in the apo form
34d2f34a1



not modelled 100.0 17 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
35c1yaeB_



not modelled 99.9 13 PDB header:membrane protein
Chain: B: PDB Molecule:glutamate receptor, ionotropic kainate 2;
PDBTitle: structure of the kainate receptor subunit glur6 agonist binding domain2 complexed with domoic acid
36c3kg2A_



not modelled 99.8 19 PDB header:membrane protein, transport protein
Chain: A: PDB Molecule:glutamate receptor 2;
PDBTitle: ampa subtype ionotropic glutamate receptor in complex with competitive2 antagonist zk 200775
37c3n5lA_



not modelled 98.5 15 PDB header:transport protein
Chain: A: PDB Molecule:binding protein component of abc phosphonate transporter;
PDBTitle: crystal structure of a binding protein component of abc phosphonate2 transporter (pa3383) from pseudomonas aeruginosa at 1.97 a resolution
38c3e4rA_



not modelled 98.1 14 PDB header:transport protein
Chain: A: PDB Molecule:nitrate transport protein;
PDBTitle: crystal structure of the alkanesulfonate binding protein2 (ssua) from the phytopathogenic bacteria xanthomonas3 axonopodis pv. citri bound to hepes
39c2x26A_



not modelled 98.1 15 PDB header:transport protein
Chain: A: PDB Molecule:periplasmic aliphatic sulphonates-binding protein;
PDBTitle: crystal structure of the periplasmic aliphatic sulphonate2 binding protein ssua from escherichia coli
40c3uifA_



not modelled 97.9 14 PDB header:transport protein
Chain: A: PDB Molecule:sulfonate abc transporter, periplasmic sulfonate-binding
PDBTitle: crystal structure of putative sulfonate abc transporter, periplasmic2 sulfonate-binding protein ssua from methylobacillus flagellatus kt
41c3un6A_



not modelled 97.7 11 PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein saouhsc_00137;
PDBTitle: 2.0 angstrom crystal structure of ligand binding component of abc-type2 import system from staphylococcus aureus with zinc bound
42c3l6gA_



not modelled 97.6 11 PDB header:glycine betaine-binding protein
Chain: A: PDB Molecule:betaine abc transporter permease and substrate binding
PDBTitle: crystal structure of lactococcal opuac in its open conformation
43c3ix1A_



not modelled 97.6 13 PDB header:biosynthetic protein
Chain: A: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding
PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans
44c3ix1B_



not modelled 97.6 13 PDB header:biosynthetic protein
Chain: B: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding
PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans
45c3tqwA_



not modelled 97.6 14 PDB header:transport protein
Chain: A: PDB Molecule:methionine-binding protein;
PDBTitle: structure of a abc transporter, periplasmic substrate-binding protein2 from coxiella burnetii
46d1xs5a_



not modelled 97.5 10 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
47c3k2dA_



not modelled 97.1 11 PDB header:immune system
Chain: A: PDB Molecule:abc-type metal ion transport system, periplasmic component;
PDBTitle: crystal structure of immunogenic lipoprotein a from vibrio vulnificus
48d1p99a_



not modelled 97.1 15 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
49c1p99A_



not modelled 97.1 15 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pg110;
PDBTitle: 1.7a crystal structure of protein pg110 from staphylococcus2 aureus
50c3hn0A_



not modelled 97.1 9 PDB header:transport protein
Chain: A: PDB Molecule:nitrate transport protein;
PDBTitle: crystal structure of an abc transporter (bdi_1369) from2 parabacteroides distasonis at 1.75 a resolution
51c3tmgA_



not modelled 96.9 13 PDB header:transport protein
Chain: A: PDB Molecule:glycine betaine, l-proline abc transporter,
PDBTitle: crystal structure of glycine betaine, l-proline abc transporter,2 glycine/betaine/l-proline-binding protein (prox) from borrelia3 burgdorferi
52c2x7pA_



not modelled 96.8 10 PDB header:unknown function
Chain: A: PDB Molecule:possible thiamine biosynthesis enzyme;
PDBTitle: the conserved candida albicans ca3427 gene product defines a new2 family of proteins exhibiting the generic periplasmic binding3 protein structural fold
53c3gxaA_



not modelled 95.9 16 PDB header:protein binding
Chain: A: PDB Molecule:outer membrane lipoprotein gna1946;
PDBTitle: crystal structure of gna1946
54c2dvzA_



not modelled 95.6 13 PDB header:transport protein
Chain: A: PDB Molecule:putative exported protein;
PDBTitle: structure of a periplasmic transporter
55c3ir1F_



not modelled 95.5 12 PDB header:protein binding
Chain: F: PDB Molecule:outer membrane lipoprotein gna1946;
PDBTitle: crystal structure of lipoprotein gna1946 from neisseria2 meningitidis
56c2de4B_



not modelled 95.3 12 PDB header:hydrolase
Chain: B: PDB Molecule:dibenzothiophene desulfurization enzyme b;
PDBTitle: crystal structure of dszb c27s mutant in complex with biphenyl-2-2 sulfinic acid
57c3qslA_



not modelled 95.2 16 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative exported protein;
PDBTitle: structure of cae31940 from bordetella bronchiseptica rb50
58c2f5xC_



not modelled 94.5 11 PDB header:transport protein
Chain: C: PDB Molecule:bugd;
PDBTitle: structure of periplasmic binding protein bugd
59d1us5a_



not modelled 94.0 13 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
60c2ql3G_



not modelled 92.8 12 PDB header:transcription
Chain: G: PDB Molecule:probable transcriptional regulator, lysr family protein;
PDBTitle: crystal structure of the c-terminal domain of a probable lysr family2 transcriptional regulator from rhodococcus sp. rha1
61c2g29A_



not modelled 92.3 12 PDB header:transport protein
Chain: A: PDB Molecule:nitrate transport protein nrta;
PDBTitle: crystal structure of the periplasmic nitrate-binding2 protein nrta from synechocystis pcc 6803
62c2qpqC_



not modelled 92.3 15 PDB header:transport protein
Chain: C: PDB Molecule:protein bug27;
PDBTitle: structure of bug27 from bordetella pertussis
63c2i4cA_



not modelled 91.3 12 PDB header:transport protein
Chain: A: PDB Molecule:bicarbonate transporter;
PDBTitle: crystal structure of bicarbonate transport protein cmpa from2 synechocystis sp. pcc 6803 in complex with bicarbonate and calcium
64c3ho7A_



not modelled 90.8 13 PDB header:transcription
Chain: A: PDB Molecule:oxyr;
PDBTitle: crystal structure of oxyr from porphyromonas gingivalis
65d2nxoa1



not modelled 85.9 11 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
66c3oxnD_



not modelled 85.3 7 PDB header:transcription regulator
Chain: D: PDB Molecule:putative transcriptional regulator, lysr family;
PDBTitle: the crystal structure of a putative transcriptional regulator from2 vibrio parahaemolyticus
67d1al3a_



not modelled 84.0 12 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
68c1al3A_



not modelled 84.0 12 PDB header:transcription regulation
Chain: A: PDB Molecule:cys regulon transcriptional activator cysb;
PDBTitle: cofactor binding fragment of cysb from klebsiella aerogenes
69c3n6uA_



not modelled 81.9 12 PDB header:transcription regulator
Chain: A: PDB Molecule:lysr type regulator of tsambcd;
PDBTitle: effector binding domain of tsar in complex with its inducer p-2 toluenesulfonate
70d2czla1



not modelled 81.3 10 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
71d2fyia1



not modelled 80.1 14 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
72d1zbma1



not modelled 79.6 10 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
73c2rejA_



not modelled 79.0 15 PDB header:choline-binding protein
Chain: A: PDB Molecule:putative glycine betaine abc transporter protein;
PDBTitle: abc-transporter choline binding protein in unliganded semi-2 closed conformation
74c3jv9B_



not modelled 75.5 11 PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, lysr family;
PDBTitle: the structure of a reduced form of oxyr from n. meningitidis
75d1i6aa_



not modelled 74.3 12 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
76c3lr1A_



not modelled 65.6 10 PDB header:transport protein
Chain: A: PDB Molecule:tungstate abc transporter, periplasmic tungstate-
PDBTitle: the crystal structure of the tungstate abc transporter from2 geobacter sulfurreducens
77c2h9qC_



not modelled 61.3 11 PDB header:transcription
Chain: C: PDB Molecule:hth-type transcriptional regulator catm;
PDBTitle: crystal structure of the effector binding domain of a catm2 variant (r156h)
78c2f7cA_



not modelled 61.1 11 PDB header:gene regulation
Chain: A: PDB Molecule:hth-type transcriptional regulator catm;
PDBTitle: catm effector binding domain with its effector cis,cis-muconate
79c2f78A_



not modelled 59.7 12 PDB header:gene regulation
Chain: A: PDB Molecule:hth-type transcriptional regulator benm;
PDBTitle: benm effector binding domain with its effector benzoate
80d1utha_



not modelled 49.5 10 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
81c2uyeA_



not modelled 46.4 9 PDB header:transcription
Chain: A: PDB Molecule:regulatory protein;
PDBTitle: double mutant y110s,f111v dntr from burkholderia sp. strain2 dnt in complex with thiocyanate
82c3r6uA_



not modelled 35.3 13 PDB header:transport protein
Chain: A: PDB Molecule:choline-binding protein;
PDBTitle: crystal structure of choline binding protein opubc from bacillus2 subtilis
83d1ixca2



not modelled 32.8 11 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
84c1hfeT_



not modelled 30.5 10 PDB header:hydrogenase
Chain: T: PDB Molecule:protein (fe-only hydrogenase (e.c.1.18.99.1)
PDBTitle: 1.6 a resolution structure of the fe-only hydrogenase from2 desulfovibrio desulfuricans
85d1hfes_



not modelled 30.5 10 Fold:Non-globular all-alpha subunits of globular proteins
Superfamily:Fe-only hydrogenase smaller subunit
Family:Fe-only hydrogenase smaller subunit
86c2h9bB_



not modelled 28.8 13 PDB header:transcription
Chain: B: PDB Molecule:hth-type transcriptional regulator benm;
PDBTitle: crystal structure of the effector binding domain of a benm variant2 (benm r156h/t157s)
87d1atga_



not modelled 25.7 13 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
88d2ozza1



not modelled 24.2 13 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
89c3fd3A_



not modelled 21.9 9 PDB header:transcription regulator
Chain: A: PDB Molecule:chromosome replication initiation inhibitor protein;
PDBTitle: structure of the c-terminal domains of a lysr family protein from2 agrobacterium tumefaciens str. c58.
90c3eplA_



not modelled 20.6 12 PDB header:transferase/rna
Chain: A: PDB Molecule:trna isopentenyltransferase;
PDBTitle: crystallographic snapshots of eukaryotic2 dimethylallyltransferase acting on trna: insight into trna3 recognition and reaction mechanism
91d2esna2



not modelled 16.7 9 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
92c2vd3B_



not modelled 16.3 9 PDB header:transferase
Chain: B: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: the structure of histidine inhibited hisg from2 methanobacterium thermoautotrophicum
93c2esnC_



not modelled 15.9 12 PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:probable transcriptional regulator;
PDBTitle: the crystal structure of probable transcriptional regulator pa04772 from pseudomonas aeruginosa
94c3muqB_



not modelled 12.9 10 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized conserved protein;
PDBTitle: the crystal structure of a conserved functionally unknown protein from2 vibrio parahaemolyticus rimd 2210633
95d1g12a_



not modelled 12.7 17 Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Fungal zinc peptidase
96c3chgB_



not modelled 12.2 16 PDB header:ligand binding protein
Chain: B: PDB Molecule:glycine betaine-binding protein;
PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa
97c3fj7A_



not modelled 12.0 11 PDB header:protein binding
Chain: A: PDB Molecule:major antigenic peptide peb3;
PDBTitle: crystal structure of l-phospholactate bound peb3
98c3hhfB_



not modelled 11.9 11 PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, lysr family;
PDBTitle: structure of crga regulatory domain, a lysr-type transcriptional2 regulator from neisseria meningitidis.
99c1jvnB_



not modelled 10.7 22 PDB header:transferase
Chain: B: PDB Molecule:bifunctional histidine biosynthesis protein hishf;
PDBTitle: crystal structure of imidazole glycerol phosphate synthase: a tunnel2 through a (beta/alpha)8 barrel joins two active sites