PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3kzgB_

Fold library id	PDB Header	Molecule	Title
c3kzgB_	PDB header: transport protein	Chain: B: PDB Molecule: arginine 3rd transport system periplasmic binding	PDBTitle: crystal structure of an arginine 3rd transport system2 periplasmic binding protein from legionella pneumophila

Links to external resources
Added to library: Sat Aug 28 23:10:28 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S L N L T I G T S K F N P P F E V W S G N N S S L Y G F D I D L X Q E I C R R L H A T C T F E A Y I F D D L F P A L K N R E V D L V I A S X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T
T T S
S T
G G G T T S S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I I T D E R K K H F I F S L P Y X E S N S Q Y I T T V D S K I S T F D D L H G K K I G V R K G T P Y A R Q V L S E N R N N Q V I F Y E L I Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
T T
S B
T T
S
S G G G G T T
T T S T T
S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D X L L G L S N N Q V D A S L X D Y E A A K Y W X A S E P Y A Y K L I G K K Y K L I G K K I S I G E G Y S I X A N P D Q F V L I K K I N K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S T T S S S
S S
T T T
S
T T
B
G G G

. . . . . . . . . 220 . . . . . . . .

Sequence L L E X E A D G T Y L R L Y S E Y F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	L	N	L	T	I	G	T	S	K	F	N	P	P	F	E	V	W	S	G	N	N	S	S	L	Y	G	F	D	I	D	L	X	Q	E	I	C	R	R	L	H	A	T	C	T	F	E	A	Y	I	F	D	D	L	F	P	A	L	K	N	R	E	V	D	L	V	I	A	S	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S			T	T	T						T	T	S				S														T										G	G	G							T	T	S	S	S				S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	I	T	D	E	R	K	K	H	F	I	F	S	L	P	Y	X	E	S	N	S	Q	Y	I	T	T	V	D	S	K	I	S	T	F	D	D	L	H	G	K	K	I	G	V	R	K	G	T	P	Y	A	R	Q	V	L	S	E	N	R	N	N	Q	V	I	F	Y	E	L	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B							T	T							S	B										T	T		S			S	G	G	G	G	T	T							T	T	S	T								T		S								S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	X	L	L	G	L	S	N	N	Q	V	D	A	S	L	X	D	Y	E	A	A	K	Y	W	X	A	S	E	P	Y	A	Y	K	L	I	G	K	K	Y	K	L	I	G	K	K	I	S	I	G	E	G	Y	S	I	X	A	N	P	D	Q	F	V	L	I	K	K	I	N	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S	S	S												T	T	S	S	S		S	S		T	T	T			S											T	T		B						G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Sequence	L	L	E	X	E	A	D	G	T	Y	L	R	L	Y	S	E	Y	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T