PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3muqB_

Fold library id	PDB Header	Molecule	Title
c3muqB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: uncharacterized conserved protein;	PDBTitle: the crystal structure of a conserved functionally unknown protein from2 vibrio parahaemolyticus rimd 2210633

Links to external resources
Added to library: Sat Aug 28 19:26:35 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E H V R L A T T T S T Y H S G L L D Y L L P Q F E K D T G Y K V D V I A A G T G K A L K X G E N G D V D L V X T H A P K A E G T F V E K G Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T G G G G T
T T S S S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G V L P R K L X Y N D F V I V G P K A D P A K I K D D E S V L D V F K E I A N K N A T F I S R G D D S G T H K K E X G F W A Q T K I E P N F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T
S
T T
S
S T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G G Y R S V G Q G X G P T L N X A S E X Q G Y T X S D R G T W L A Y Q N K L D L E I L F Q G D E K L F N P Y Q V I L V N P E R Y P T I N Y Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T
G G G
S
G G G
T T T
T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . .

Sequence G A K A F S D W L V N P R G Q E L I N G F R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	H	V	R	L	A	T	T	T	S	T	Y	H	S	G	L	L	D	Y	L	L	P	Q	F	E	K	D	T	G	Y	K	V	D	V	I	A	A	G	T	G	K	A	L	K	X	G	E	N	G	D	V	D	L	V	X	T	H	A	P	K	A	E	G	T	F	V	E	K	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	G	G	G	G	T																												T	T	S	S	S																T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	V	L	P	R	K	L	X	Y	N	D	F	V	I	V	G	P	K	A	D	P	A	K	I	K	D	D	E	S	V	L	D	V	F	K	E	I	A	N	K	N	A	T	F	I	S	R	G	D	D	S	G	T	H	K	K	E	X	G	F	W	A	Q	T	K	I	E	P	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T		T	T			T	T		S												T	T								S		S														T					S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	G	Y	R	S	V	G	Q	G	X	G	P	T	L	N	X	A	S	E	X	Q	G	Y	T	X	S	D	R	G	T	W	L	A	Y	Q	N	K	L	D	L	E	I	L	F	Q	G	D	E	K	L	F	N	P	Y	Q	V	I	L	V	N	P	E	R	Y	P	T	I	N	Y	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																			T														G	G	G		S									G	G	G											T	T	T		T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Sequence	G	A	K	A	F	S	D	W	L	V	N	P	R	G	Q	E	L	I	N	G	F	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S