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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2f5xC_

Fold library idPDB HeaderMoleculeTitle
c2f5xC_PDB header: transport proteinChain: C: PDB Molecule: bugd;PDBTitle: structure of periplasmic binding protein bugd


Added to library: Tue Mar 16 12:09:25 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YPERPVNXVVPFAAGGPTDNVARSLAESXRPTLGETVVVENKGGAGGTIGTTQVARAQPDGYSILLXHAG
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Known secondary structure (DSSP)

SS
SS
TTSSS



GGGTS
SSSST
 .........80.........90.........100.........110.........120.........130.........140
Sequence FSTAPSLYKNPGYEPYTSFEPIGLVVDVPXTIIARGDFPPNNIKELAEYVKKNADKISLANAGIGAASHL
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Known secondary structure (DSSP) GGGT
S

SS
TTTSTT
S

SGGG
S
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence CGTXLVEALGVNLLTIPYKGTAPAXNDLLGKQVDLXCDQTTNTTQQITSGKVKAYAVTSLKRVPTLPDLP
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Known secondary structure (DSSP) T



SSTTSS
TS
SSS

TTSTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TXDESGYKGFEVGIWHGXWAPKGTPKPVVDKLVKSLQAGLADPKFQERXKQLGAEVLTNEANPEALQAKV
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Known secondary structure (DSSP) BTTTTT
TT


TT


TT

GGG
S
 .........290.........300
Sequence KQQVPQWAELFKKAGVEKQD
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Known secondary structure (DSSP) TT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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