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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3uifA_

Fold library idPDB HeaderMoleculeTitle
c3uifA_PDB header: transport proteinChain: A: PDB Molecule: sulfonate abc transporter, periplasmic sulfonate-bindingPDBTitle: crystal structure of putative sulfonate abc transporter, periplasmic2 sulfonate-binding protein ssua from methylobacillus flagellatus kt


Added to library: Sat Nov 26 19:52:54 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VEDLKVVRIASVATNVGGKTVYAGSASLVVNGAFPEELRKQGIKVEWVPAAXASVGPVINEGFASGKIDF
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Known secondary structure (DSSP)



TT
TSSTT
TT
TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence GIYGDLPPIILNASKPTVQLVAPWGTTSNSYLVVPKNSTAKSIKDLKGKKIALHRGRPWELAFSNLLQSE
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Known secondary structure (DSSP) SS








TT



SGGGGTTS
TTSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLTFKDFKIVNVNPQVGAAALASGTVDGFFSLFDSYILEDRGVGKIIWSTKTAPVDWKLXGGVWARNDFV
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Known secondary structure (DSSP) T

GGGS


TSSSSTTTTSGGGS
GGGS

 .........220.........230.........240.........250.........260.........270.........280
Sequence KQNPEITQAIVTAYLKSVHWVAQDENKETYIREYSNKIYPESVNRREYDQDNVSWRQRWSPLYDVALQEH
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Known secondary structure (DSSP)
SGGGTS
TTS
TTTT
SS
TTGGG




 .........290.........300.........310.........320.........330
Sequence YRKAVAYAQASGLTRTQADVQQXLNPHFVATALKELKLEGFWTPNAENLY
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Known secondary structure (DSSP) TTS
SS


B
TTT
TTTS








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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