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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3ir1F_

Fold library idPDB HeaderMoleculeTitle
c3ir1F_PDB header: protein bindingChain: F: PDB Molecule: outer membrane lipoprotein gna1946;PDBTitle: crystal structure of lipoprotein gna1946 from neisseria2 meningitidis


Added to library: Sat Aug 28 21:55:57 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KEIVFGTTVGDFGDMVKEQIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKPYLDDFKKEHN
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Known secondary structure (DSSP)
SSTTTT
SSSSTS
S

 .........80.........90.........100.........110.........120.........130.........140
Sequence LDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVMLDELGWIKLKDGINPLTASKAD
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Known secondary structure (DSSP)



B


SSS
STTS

TT

STTSS
TTS
GGG

GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence IAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAISSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWL
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Known secondary structure (DSSP)
TT


GGGGGGSS
TT

GGG
S


STT

GGGTT
 .........220.........230.........240.....
Sequence KDVTEAYNSDAFKAYAHKRFEGYKSPAAWNEGAAM
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Known secondary structure (DSSP) TSSSTT
B

GGG






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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