PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3hhfB_

Fold library id	PDB Header	Molecule	Title
c3hhfB_	PDB header: transcription regulator	Chain: B: PDB Molecule: transcriptional regulator, lysr family;	PDBTitle: structure of crga regulatory domain, a lysr-type2 transcriptional regulator from neisseria meningitidis.

Links to external resources
Added to library: Sat Aug 28 17:15:13 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P Q G V L S V D S A X P X V L H L L A P L A A K F N E R Y P H I R L S L V S S E G Y I N L I E R K V D I A L R A G D D S G L R A R H L F D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T
S T T T T S S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R F R V I A S P E Y L A K H G T P Q S T E E L A G H Q C L G F T E P G S L N T W A V L D A Q G N P Y K I S P H F T A S S G E I L R S L C L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G G G G S
B
S S
G G G G
T T S
S S S S T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . .

Sequence G C G I V C L S D F L V D N D I A E G K L I P L L A E Q T S D K T H P F N A V Y Y S D K A V N L R L R V F L D F L V E E L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
B T S S
T T T B
G G G G G
-

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	Q	G	V	L	S	V	D	S	A	X	P	X	V	L	H	L	L	A	P	L	A	A	K	F	N	E	R	Y	P	H	I	R	L	S	L	V	S	S	E	G	Y	I	N	L	I	E	R	K	V	D	I	A	L	R	A	G	D	D	S	G	L	R	A	R	H	L	F	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T													T	T									S	T	T					T	T	S	S	S									S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	F	R	V	I	A	S	P	E	Y	L	A	K	H	G	T	P	Q	S	T	E	E	L	A	G	H	Q	C	L	G	F	T	E	P	G	S	L	N	T	W	A	V	L	D	A	Q	G	N	P	Y	K	I	S	P	H	F	T	A	S	S	G	E	I	L	R	S	L	C	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S	S	G	G	G	G	G	G	S		B				S	S		G	G	G	G							T	T	S								S	S			S	S										T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Sequence	G	C	G	I	V	C	L	S	D	F	L	V	D	N	D	I	A	E	G	K	L	I	P	L	L	A	E	Q	T	S	D	K	T	H	P	F	N	A	V	Y	Y	S	D	K	A	V	N	L	R	L	R	V	F	L	D	F	L	V	E	E	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S		B															T	S	S					T	T	T	B													G	G	G	G	G																-