PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2ql3G_

Fold library id	PDB Header	Molecule	Title
c2ql3G_	PDB header: transcription	Chain: G: PDB Molecule: probable transcriptional regulator, lysr family	PDBTitle: crystal structure of the c-terminal domain of a probable2 lysr family transcriptional regulator from rhodococcus sp.3 rha1

Links to external resources
Added to library: Tue Mar 16 14:04:08 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V A G P I A V G C Y P A L G P T I L P S X L Y A F T A E Y P R A S V E F R E D T Q N R L R T Q L E G G E L D V A I V Y D L D L S P E W Q T V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T T T
T T
T S
S S S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P L X T R E P X V V L G A E H P L A G V D G P V R L A D L A E H P X V L L D A P P S T N H A X D V C R E A G F A P R V A Y R T A N F E T A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T T T S
S
B
G G G G T T S
T T T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . .

Sequence A F V G R G L G W T L L L Q R P R V D V T Y E G L P V V V K P I A E P K P A S V A V V V A W H Q E A T L S R V A R A F I R F V T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
B S
S S
B
T T S
B
B
S S
T T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	A	G	P	I	A	V	G	C	Y	P	A	L	G	P	T	I	L	P	S	X	L	Y	A	F	T	A	E	Y	P	R	A	S	V	E	F	R	E	D	T	Q	N	R	L	R	T	Q	L	E	G	G	E	L	D	V	A	I	V	Y	D	L	D	L	S	P	E	W	Q	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G	T	T	T	T													T	T																				T	S		S						S	S	S			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	L	X	T	R	E	P	X	V	V	L	G	A	E	H	P	L	A	G	V	D	G	P	V	R	L	A	D	L	A	E	H	P	X	V	L	L	D	A	P	P	S	T	N	H	A	X	D	V	C	R	E	A	G	F	A	P	R	V	A	Y	R	T	A	N	F	E	T	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	S	T	T	T	T	S		S		B		G	G	G	G	T	T	S								T	T												T	T										S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Sequence	A	F	V	G	R	G	L	G	W	T	L	L	L	Q	R	P	R	V	D	V	T	Y	E	G	L	P	V	V	V	K	P	I	A	E	P	K	P	A	S	V	A	V	V	V	A	W	H	Q	E	A	T	L	S	R	V	A	R	A	F	I	R	F	V	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	S		B				S				S	S		B		T	T	S		B						B		S	S													T	T															T