PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2v3tA_

Fold library id	PDB Header	Molecule	Title
c2v3tA_	PDB header: receptor	Chain: A: PDB Molecule: glutamate receptor delta-2 subunit synonym	PDBTitle: structure of the ligand-binding core of the ionotropic2 glutamate receptor-like glurdelta2 in the apo form

Links to external resources
Added to library: Tue Mar 16 14:37:46 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G V V L R V V T V L E E P F V X V S E N V L G K P K K Y Q G F S I D V L D A L S N Y L G F N Y E I Y V A P D H K Y G S P T W N G L V G E L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T T B
T T S
S T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F K R A D I G I S A L T I T P D R E N V V D F T T R Y X D Y S V G V L L R R S I Q S L Q D L S K Q T D I P Y G T V L D S A V Y Q H V R X K G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S
S
S
S T T
S S
B T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L N P S X Y S Q X W R X I N N N V L E S Q A G I Q K V K Y G N Y A F V W D A A V L E Y V A I N D P D C S F Y T V T V A D R G Y G I A L Q H G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
B
S S
T
T T
S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . .

Sequence S P Y R D V F S Q R I L E L Q Q S G D X D I L K H K W W P K N G Q C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	V	V	L	R	V	V	T	V	L	E	E	P	F	V	X	V	S	E	N	V	L	G	K	P	K	K	Y	Q	G	F	S	I	D	V	L	D	A	L	S	N	Y	L	G	F	N	Y	E	I	Y	V	A	P	D	H	K	Y	G	S	P	T	W	N	G	L	V	G	E	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											B	T	T	T	B							T	T	S						S														T									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	K	R	A	D	I	G	I	S	A	L	T	I	T	P	D	R	E	N	V	V	D	F	T	T	R	Y	X	D	Y	S	V	G	V	L	L	R	R	S	I	Q	S	L	Q	D	L	S	K	Q	T	D	I	P	Y	G	T	V	L	D	S	A	V	Y	Q	H	V	R	X	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		S																S						S															S					T	T			S	S					B	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	N	P	S	X	Y	S	Q	X	W	R	X	I	N	N	N	V	L	E	S	Q	A	G	I	Q	K	V	K	Y	G	N	Y	A	F	V	W	D	A	A	V	L	E	Y	V	A	I	N	D	P	D	C	S	F	Y	T	V	T	V	A	D	R	G	Y	G	I	A	L	Q	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																	B												S	S																T		T	T										S									T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Sequence	S	P	Y	R	D	V	F	S	Q	R	I	L	E	L	Q	Q	S	G	D	X	D	I	L	K	H	K	W	W	P	K	N	G	Q	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S															T										S			S	S