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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3r6uA_

Fold library idPDB HeaderMoleculeTitle
c3r6uA_PDB header: transport proteinChain: A: PDB Molecule: choline-binding protein;PDBTitle: crystal structure of choline binding protein opubc from bacillus2 subtilis


Added to library: Sat Jun 18 22:00:02 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QTIKIGAQSMSESEIIASMLGQLIEHHTDLKTTTIKNLGSNAVQQQALMNGEIDIAATRYTGDALTGTLR
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Known secondary structure (DSSP)

SSSS


STTS
STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence MEPEKDPDKALALTQREFKKRYDLKWYDSYGFDNTYAFTVSKELADQYHLETVSDVKKWAPQLKLGVDNY
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Known secondary structure (DSSP)




S




S
B

T

BSGGGGGGGGG

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence WMKLKGNGYQDFTKTYGMTFGGTYPMQIGLVYDAVKSGKMDIVLAYSTDGRIKSYGLKMLKDDKQFFPPY
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Known secondary structure (DSSP) GGG
SSSS



S

GGGTS
STT
TT
B
TT

S


 .........220.........230.........240.........250.........260.........270..
Sequence DCSPVVPEKVLKEHPELEGIIKKMLGKIDTATMQELNYEVDGNLKEPSVVAKEYLEKHRYFE
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Known secondary structure (DSSP) BSTTTTTT


TS


TGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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