Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2dvzA_

Fold library idPDB HeaderMoleculeTitle
c2dvzA_PDB header: transport proteinChain: A: PDB Molecule: putative exported protein;PDBTitle: structure of a periplasmic transporter


Added to library: Tue Mar 16 13:41:16 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AYPSKAIRVIVPFAPGGSTDIIARLVTQRXSQELGQPXVVENKGGAGGAIGASEAARAEPDGYTLSIATV
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)


SS
SS
TTSTS



GGGS
TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence STXAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGV
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) TSTTT
S

TTTS

TTSS
SSTSTTT
S
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LHLXGESFKXATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSXPQIQAGKLRAXAIAWPTRIDAIK
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) T



SSTSSSTTSSSSS

GGGT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DVPTFADAGFPVLNQPVWYGLLAPKGTPXDVVNKLRDAAVVALKDPKVIKALDDQGSAPSGNTPEEFAKE
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TS
BTTTTT
GGG


TT

T
T



 .........290.........300.
Sequence IKEQYDWAQDVVKKQNIKLDE
Predicted secondary structure





SS confidence




















Known secondary structure (DSSP) STT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D