PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3n6uA_

Fold library id	PDB Header	Molecule	Title
c3n6uA_	PDB header: transcription regulator	Chain: A: PDB Molecule: lysr type regulator of tsambcd;	PDBTitle: effector binding domain of tsar in complex with its inducer p-2 toluenesulfonate

Links to external resources
Added to library: Sat Jun 4 10:40:48 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G H I T F A A S P A I A L A A L P L A L A S F A R E F P D V T V N V R D G M Y P A V S P Q L R D G T L D F A L T A A H K H D I D T D L E A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T
T T T T T T S
S
G G G S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P L Y V S D V V I V G Q R Q H P M A N A T R L A E L Q E C R W A F S S A P R G P G A I I R N A F A R Y G L P E P K L G L V C E S F L A L P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T T
S G G G G T T S
T T S T T T T
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . .

Sequence V V A H S D L L T T M P R T L Y E R N A F K D Q L C S I P L Q D A L P N P T I Y V L R R H D L P V T P A A A G L I R W I Q H H A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
B S S T T G G G
S
T T S
T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	H	I	T	F	A	A	S	P	A	I	A	L	A	A	L	P	L	A	L	A	S	F	A	R	E	F	P	D	V	T	V	N	V	R	D	G	M	Y	P	A	V	S	P	Q	L	R	D	G	T	L	D	F	A	L	T	A	A	H	K	H	D	I	D	T	D	L	E	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T														T	T										T	T	T	T						T	T	S		S								G	G	G	S		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	L	Y	V	S	D	V	V	I	V	G	Q	R	Q	H	P	M	A	N	A	T	R	L	A	E	L	Q	E	C	R	W	A	F	S	S	A	P	R	G	P	G	A	I	I	R	N	A	F	A	R	Y	G	L	P	E	P	K	L	G	L	V	C	E	S	F	L	A	L	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T		T	T	T	T			S	G	G	G	G	T	T	S								T	T	S	T	T										T	T													T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Sequence	V	V	A	H	S	D	L	L	T	T	M	P	R	T	L	Y	E	R	N	A	F	K	D	Q	L	C	S	I	P	L	Q	D	A	L	P	N	P	T	I	Y	V	L	R	R	H	D	L	P	V	T	P	A	A	A	G	L	I	R	W	I	Q	H	H	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S	S		B										S	S	T	T	G	G	G								S													T	T	S																	T