PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3mplA_

Fold library id	PDB Header	Molecule	Title
c3mplA_	PDB header: signaling protein	Chain: A: PDB Molecule: virulence sensor protein bvgs;	PDBTitle: crystal structure of bordetella pertussis bvgs vft2 domain (double2 mutant f375e/q461e)

Links to external resources
Added to library: Tue Oct 19 11:58:23 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H P A Y S A R E Q Q W M A D H P V V K V A V L N L F A P F T L F R E Q F G G I S A A V L Q L L Q L R T G L D F E I I G V D T V E E L I A K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T T
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R S G E A D M A G A L E V N S A R E S F L S F S R P Y V R N G M V I V T R Q D P D A P V D A D H L D G R T V A L V R N S A A I P L L Q R R Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S S
G G G T T T
S S
T T T T
T T S T T
T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P Q A K V V T A D N P S E A M L M V A N G Q A D A V V E T Q I S A S Y Y V N R Y F A G K L R I A S A L D L P P A E I A L A T T R G Q T E L M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S T S
S
T T T
S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . .

Sequence S I L N K A L Y S I S N D E L A S I I S R W R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	P	A	Y	S	A	R	E	Q	Q	W	M	A	D	H	P	V	V	K	V	A	V	L	N	L	F	A	P	F	T	L	F	R	E	Q	F	G	G	I	S	A	A	V	L	Q	L	L	Q	L	R	T	G	L	D	F	E	I	I	G	V	D	T	V	E	E	L	I	A	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S								T			T	T	T									S																							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	S	G	E	A	D	M	A	G	A	L	E	V	N	S	A	R	E	S	F	L	S	F	S	R	P	Y	V	R	N	G	M	V	I	V	T	R	Q	D	P	D	A	P	V	D	A	D	H	L	D	G	R	T	V	A	L	V	R	N	S	A	A	I	P	L	L	Q	R	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S	S	S									G	G	G	T	T	T																				S	S			T	T	T	T			T	T	S						T	T		T								S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	Q	A	K	V	V	T	A	D	N	P	S	E	A	M	L	M	V	A	N	G	Q	A	D	A	V	V	E	T	Q	I	S	A	S	Y	Y	V	N	R	Y	F	A	G	K	L	R	I	A	S	A	L	D	L	P	P	A	E	I	A	L	A	T	T	R	G	Q	T	E	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							S	S											T	S		S																		T	T	T									S											T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Sequence	S	I	L	N	K	A	L	Y	S	I	S	N	D	E	L	A	S	I	I	S	R	W	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S											T	T