PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3chgB_

Fold library id	PDB Header	Molecule	Title
c3chgB_	PDB header: ligand binding protein	Chain: B: PDB Molecule: glycine betaine-binding protein;	PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa

Links to external resources
Added to library: Tue Mar 16 14:00:35 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N K T I I G I D P G S G I M S L T D K A M K D Y D L N D W T L I S A S S A A M T A T L K K S Y D R K K P I I I T G W T P H W M F S R Y K L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T
T T
T T T
S S
T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y L D D P K Q S Y G S A E E I H T I T R K G F S K E Q P N A A K L L S Q F K W T Q D E M G E I M I K V E E G E K P A K V A A E Y V N K H K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T
S S
S S
T T
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q I A E W T K G V Q K V K G D K I N L A Y V A W D S E I A S T N V I G K V L E D L G Y E V T L T Q V E A G P M W T A I A T G S A D A S L S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S
T T T
T T T T S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . .

Sequence W L P N T H K A Y A A K Y K G K Y D D I G T S M T G V K M G L V V P Q Y M K N V N S I E D L K K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
T T
T T
T T
B T G G G T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	K	T	I	I	G	I	D	P	G	S	G	I	M	S	L	T	D	K	A	M	K	D	Y	D	L	N	D	W	T	L	I	S	A	S	S	A	A	M	T	A	T	L	K	K	S	Y	D	R	K	K	P	I	I	I	T	G	W	T	P	H	W	M	F	S	R	Y	K	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S													T	T		T	T																				T	T	T									S	S		T					S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	L	D	D	P	K	Q	S	Y	G	S	A	E	E	I	H	T	I	T	R	K	G	F	S	K	E	Q	P	N	A	A	K	L	L	S	Q	F	K	W	T	Q	D	E	M	G	E	I	M	I	K	V	E	E	G	E	K	P	A	K	V	A	A	E	Y	V	N	K	H	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		T	T		S	S		S	S									T	T													T	T																	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	I	A	E	W	T	K	G	V	Q	K	V	K	G	D	K	I	N	L	A	Y	V	A	W	D	S	E	I	A	S	T	N	V	I	G	K	V	L	E	D	L	G	Y	E	V	T	L	T	Q	V	E	A	G	P	M	W	T	A	I	A	T	G	S	A	D	A	S	L	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T					S	S																										T	T	T										T	T								T	T	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Sequence	W	L	P	N	T	H	K	A	Y	A	A	K	Y	K	G	K	Y	D	D	I	G	T	S	M	T	G	V	K	M	G	L	V	V	P	Q	Y	M	K	N	V	N	S	I	E	D	L	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T							T		T	T																			T	T		T	T			B	T	G	G	G	T