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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2vhaB_

Fold library idPDB HeaderMoleculeTitle
c2vhaB_PDB header: transport proteinChain: B: PDB Molecule: periplasmic binding transport protein;PDBTitle: debp


Added to library: Tue Mar 16 11:58:17 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence APAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITS
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Known secondary structure (DSSP)


TTST
STTT
SSS
STT
TT


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence QNRIPLLQNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSE
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Known secondary structure (DSSP) TTTTS
S
SS
B

TT
TTSS
SSGGGGTT
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWDIVGKPQSQEAYG
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Known secondary structure (DSSP) TT


SSTTS
STTSSSGGGS

S
 .........220.........230.........240.........250.........260.........270.......
Sequence CMLRKDDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIPPKNLNMNFELSDEMKALFKEPNDKALE
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Known secondary structure (DSSP)
TT
TTS
BTTTTB






S







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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