PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1xt8B_

Fold library id	PDB Header	Molecule	Title
c1xt8B_	PDB header: transport protein	Chain: B: PDB Molecule: putative amino-acid transporter periplasmic	PDBTitle: crystal structure of cysteine-binding protein from2 campylobacter jejuni at 2.0 a resolution

Links to external resources
Added to library: Tue Mar 16 13:38:45 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S K T L N S L D K I K Q N G V V R I G V F G D K P P F G Y V D E K G N N Q G Y D I A L A K R I A K E L F G D E N K V Q F V L V E A A N R V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T T
T T S
S S
T T
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F L K S N K V D I I L A N F T Q T P Q R A E Q V D F C S P Y M K V A L G V A V P K D S N I T S V E D L K D K T L L L N K G T T A D A Y F T Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S
S S
B
T T
T T
S G G G G T T S T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N Y P N I K T L K Y D Q N T E T F A A L M D K R G D A L S H D N T L L F A W V K D H P D F K M G I K E L G N K D V I A P A V K K G D K E L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S T T S S S
T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 .

Sequence E F I D N L I I K L G Q E Q F F H K A Y D E T L K A H F G D D V K A D D V V I E G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T G G G S
T T S
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	K	T	L	N	S	L	D	K	I	K	Q	N	G	V	V	R	I	G	V	F	G	D	K	P	P	F	G	Y	V	D	E	K	G	N	N	Q	G	Y	D	I	A	L	A	K	R	I	A	K	E	L	F	G	D	E	N	K	V	Q	F	V	L	V	E	A	A	N	R	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S							S			T	T	T					T	T	S				S															S		T	T									G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	L	K	S	N	K	V	D	I	I	L	A	N	F	T	Q	T	P	Q	R	A	E	Q	V	D	F	C	S	P	Y	M	K	V	A	L	G	V	A	V	P	K	D	S	N	I	T	S	V	E	D	L	K	D	K	T	L	L	L	N	K	G	T	T	A	D	A	Y	F	T	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S		S				S	S		B							T	T																		T	T					S	G	G	G	G	T	T	S						T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	Y	P	N	I	K	T	L	K	Y	D	Q	N	T	E	T	F	A	A	L	M	D	K	R	G	D	A	L	S	H	D	N	T	L	L	F	A	W	V	K	D	H	P	D	F	K	M	G	I	K	E	L	G	N	K	D	V	I	A	P	A	V	K	K	G	D	K	E	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S						S	S										T	T	S	S	S																	T	T																				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Sequence	E	F	I	D	N	L	I	I	K	L	G	Q	E	Q	F	F	H	K	A	Y	D	E	T	L	K	A	H	F	G	D	D	V	K	A	D	D	V	V	I	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T										T	G	G	G	S		T	T	S						B