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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3kg2A_

Fold library idPDB HeaderMoleculeTitle
c3kg2A_PDB header: membrane protein, transport proteinChain: A: PDB Molecule: glutamate receptor 2;PDBTitle: ampa subtype ionotropic glutamate receptor in complex with2 competitive antagonist zk 200775


Added to library: Sun Aug 29 00:44:29 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NSIQIGGLFPRGADQEYSAFRVGMVQFSTSEFRLTPHIDNLEVANSFAVTNAFCSQFSRGVYAIFGFYDK
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Known secondary structure (DSSP)
TT
T

SS

TT
TT
S


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence KSVNTITSFCGTLHVSFITPSFPTDGTHPFVIQMRPDLKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAV
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Known secondary structure (DSSP) TTTT

S


SS

SS
S


TT
S
GGG
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence LDSAAEKKWQVTAINVGNINNDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYH
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Known secondary structure (DSSP) TT

SS

SSSTTTTTTTTTTTT



TTTBTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YIIANLGFTDGDLLKIQFGGAEVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAV
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Known secondary structure (DSSP)
SSBSSSS

SSSSSSB
SS
TTSTTS
TTTSTT

SS


 .........290.........300.........310.........320.........330.........340.........350
Sequence QVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTIN
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Known secondary structure (DSSP) TTT




SS



TT
SS



TTT


TT

B
SSS
B
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence IMELKTNGPRKIGYWSEVDKMVLTEDDTSGLEQKTVVVTTILESPYVMMKANHAALAGNERYEGYCVDLA
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Known secondary structure (DSSP)
SS
TTT




SS







TTTS
TTGGG

GGGGS
 .........430.........440.........450.........460.........470.........480.........490
Sequence AEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLG
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Known secondary structure (DSSP) T


SS




B
TTT

B
TTS
S
S

B

TT
S
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence ISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSTNEFGIFNSLWFSLGAFMQPRSLSG
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Known secondary structure (DSSP)







GGGTTTTS
TTGGGT

TTTTS




 .........570.........580.........590.........600.........610.........620.........630
Sequence RIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFRRSKIAVFD
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Known secondary structure (DSSP)




SS

SS
BSSS


 .........640.........650.........660.........670.........680.........690.........700
Sequence KMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPK
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Known secondary structure (DSSP)
SS


BSSTTTTSTSTT

S

SS


T
 .........710.........720.........730.........740.........750.........760.........770
Sequence GSSLGTPVNLAVLKLSEQGLLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGLAML
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Known secondary structure (DSSP) T
SSTTTTS
S
SSTTTSTTT


S

S
 .........
Sequence VALIEFCYK
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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