Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA1YIY0
DateTue Jul 30 13:19:15 BST 2013
Unique Job ID1035bc4b501530df
SequenceMLLWMVLLLC ... Download FASTA

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:60.593 Y:41.103 Z:54.543
Model (left) based on template c3dmkA_
Top template information
PDB header:cell adhesion
Chain: A: PDB Molecule:down syndrome cell adhesion molecule (dscam) isoform
PDBTitle: crystal structure of down syndrome cell adhesion molecule (dscam)2 isoform 1.30.30, n-terminal eight ig domains
Confidence and coverage
Confidence:100.0% Coverage: 71%
173 residues ( 71% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MLLWMVLLLCESMAEAQEQFPNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKN
Secondary structure 



















SS confidence 



























































Disorder  ???


??????




????
??


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   .........70.........80.........90.........100.........110.........120
Sequence  NHVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQH
Secondary structure 






















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Disorder 


????????


???
??










???????













??



?
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   .........130.........140.........150.........160.........170.........180
Sequence  EATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKN
Secondary structure 























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Disorder  ???


??








??














????????????



????


?

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   .........190.........200.........210.........220.........230.........240
Sequence  YSCEAKNNISREISELKKFPLVVSGTAWIKSNMLPIWLPASLLGGMVIAAVVLMYFFKPC
Secondary structure 










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Disorder 






????????






???????????????





















?
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   ....
Sequence  KKHG
Secondary structure 

SS confidence 



Disorder  ????
Disorder confidence 



 

Confidence Key
High(9)                    Low (0)
?Disordered ( 41%)
Alpha helix ( 5%)
Beta strand ( 62%)

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3dmk chain A

3D model

Region: 20 - 203
Aligned: 173
Modelled: 178
Confidence: 100.0%
Identity: 14%
PDB header:cell adhesion
Chain: A: PDB Molecule:down syndrome cell adhesion molecule (dscam) isoform
PDBTitle: crystal structure of down syndrome cell adhesion molecule (dscam)2 isoform 1.30.30, n-terminal eight ig domains

Phyre2

PDB 2om5 chain A

3D model

Region: 21 - 203
Aligned: 176
Modelled: 183
Confidence: 100.0%
Identity: 20%
PDB header:cell adhesion
Chain: A: PDB Molecule:contactin 2;
PDBTitle: n-terminal fragment of human tax1

Phyre2

PDB 3jxa chain A

3D model

Region: 23 - 203
Aligned: 174
Modelled: 181
Confidence: 100.0%
Identity: 21%
PDB header:cell adhesion
Chain: A: PDB Molecule:contactin 4;
PDBTitle: immunoglobulin domains 1-4 of mouse cntn4

Phyre2

PDB 4k0v chain A

3D model

Region: 24 - 202
Aligned: 165
Modelled: 172
Confidence: 100.0%
Identity: 12%
PDB header:signaling protein/transferase
Chain: A: PDB Molecule:tek tyrosine kinase variant;
PDBTitle: structural basis for angiopoietin-1 mediated signaling initiation

Phyre2

PDB 1p6f chain A

3D model

Region: 20 - 203
Aligned: 180
Modelled: 184
Confidence: 100.0%
Identity: 9%
PDB header:immune system
Chain: A: PDB Molecule:natural cytotoxicity triggering receptor 1;
PDBTitle: structure of the human natural cytotoxicity receptor nkp46

Phyre2

PDB 1oll chain A

3D model

Region: 20 - 203
Aligned: 180
Modelled: 184
Confidence: 99.9%
Identity: 9%
PDB header:immune system/receptor
Chain: A: PDB Molecule:nk receptor;
PDBTitle: extracellular region of the human receptor nkp46

Phyre2

PDB 3shs chain A

3D model

Region: 23 - 206
Aligned: 178
Modelled: 182
Confidence: 99.9%
Identity: 18%
PDB header:viral protein
Chain: A: PDB Molecule:hoc head outer capsid protein;
PDBTitle: three n-terminal domains of the bacteriophage rb49 highly immunogenic2 outer capsid protein (hoc)

Phyre2

PDB 1efx chain E

3D model

Region: 19 - 201
Aligned: 182
Modelled: 183
Confidence: 99.9%
Identity: 14%
PDB header:immune system
Chain: E: PDB Molecule:natural killer cell receptor kir2dl2;
PDBTitle: structure of a complex between the human natural killer2 cell receptor kir2dl2 and a class i mhc ligand hla-cw3

Phyre2

PDB 3o3u chain N

3D model

Region: 26 - 194
Aligned: 161
Modelled: 169
Confidence: 99.9%
Identity: 16%
PDB header:transport protein, signaling protein
Chain: N: PDB Molecule:maltose-binding periplasmic protein, advanced glycosylation
PDBTitle: crystal structure of human receptor for advanced glycation endproducts2 (rage)

Phyre2

PDB 1e4j chain A

3D model

Region: 20 - 202
Aligned: 165
Modelled: 183
Confidence: 99.9%
Identity: 16%
PDB header:immune system
Chain: A: PDB Molecule:low affinity immunoglobulin gamma fc receptor
PDBTitle: crystal structure of the soluble human fc-gamma2 receptor iii

Phyre2

PDB 3p3y chain A

3D model

Region: 22 - 201
Aligned: 173
Modelled: 180
Confidence: 99.9%
Identity: 19%
PDB header:cell adhesion
Chain: A: PDB Molecule:neurofascin;
PDBTitle: crystal structure of neurofascin homophilic adhesion complex in space2 group p6522

Phyre2

PDB 2y25 chain C

3D model

Region: 18 - 204
Aligned: 181
Modelled: 187
Confidence: 99.9%
Identity: 20%
PDB header:structural protein
Chain: C: PDB Molecule:myomesin;
PDBTitle: crystal structure of the myomesin domains my11-my13

Phyre2

PDB 1e07 chain A

3D model

Region: 32 - 205
Aligned: 161
Modelled: 170
Confidence: 99.9%
Identity: 12%
PDB header:glycoprotein
Chain: A: PDB Molecule:carcinoembryonic antigen;
PDBTitle: model of human carcinoembryonic antigen by homology2 modelling and curve-fitting to experimental solution3 scattering data

Phyre2

PDB 3oq3 chain B

3D model

Region: 18 - 202
Aligned: 180
Modelled: 185
Confidence: 99.9%
Identity: 19%
PDB header:cytokine/viral protein
Chain: B: PDB Molecule:ifn-alpha/beta binding protein c12r;
PDBTitle: structural basis of type-i interferon sequestration by a poxvirus2 decoy receptor

Phyre2

PDB 2gy7 chain B

3D model

Region: 25 - 201
Aligned: 164
Modelled: 177
Confidence: 99.9%
Identity: 12%
PDB header:signaling protein
Chain: B: PDB Molecule:angiopoietin-1 receptor;
PDBTitle: angiopoietin-2/tie2 complex crystal structure

Phyre2

PDB 3laf chain A

3D model

Region: 22 - 204
Aligned: 176
Modelled: 183
Confidence: 99.9%
Identity: 15%
PDB header:apoptosis
Chain: A: PDB Molecule:deleted in colorectal cancer;
PDBTitle: structure of dcc, a netrin-1 receptor

Phyre2

PDB 3sgj chain C

3D model

Region: 21 - 202
Aligned: 164
Modelled: 182
Confidence: 99.9%
Identity: 17%
PDB header:immune system
Chain: C: PDB Molecule:human fcg3a receptor;
PDBTitle: unique carbohydrate-carbohydrate interactions are required for high2 affinity binding between fcgiii and antibodies lacking core fucose

Phyre2

PDB 1g0x chain A

3D model

Region: 20 - 203
Aligned: 174
Modelled: 184
Confidence: 99.9%
Identity: 17%
PDB header:immune system
Chain: A: PDB Molecule:leucocyte immunoglobulin-like receptor-1;
PDBTitle: crystal structure of the ligand binding domain of lir-12 (ilt2)

Phyre2

PDB 1im9 chain D

3D model

Region: 22 - 202
Aligned: 173
Modelled: 181
Confidence: 99.9%
Identity: 15%
PDB header:immune system
Chain: D: PDB Molecule:killer cell immunoglobulin-like receptor 2dl1;
PDBTitle: crystal structure of the human natural killer cell2 inhibitory receptor kir2dl1 bound to its mhc ligand hla-cw4

Phyre2

PDB 3qs7 chain F

3D model

Region: 32 - 201
Aligned: 155
Modelled: 170
Confidence: 99.9%
Identity: 12%
PDB header:cytokine/signaling protein
Chain: F: PDB Molecule:fl cytokine receptor;
PDBTitle: crystal structure of a human flt3 ligand-receptor ternary complex

Phyre2
1

c3dmkA_
2

c2om5A_
3

c3jxaA_
4

c4k0vA_
5

c1p6fA_
6

c1ollA_
7

c3shsA_
8

c1efxE_
9

c3o3uN_
10

c1e4jA_
11

c3p3yA_
12

c2y25C_
13

c1e07A_
14

c3oq3B_
15

c2gy7B_
16

c3lafA_
17

c3sgjC_
18

c1g0xA_
19

c1im9D_
20

c3qs7F_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3dmkA_



100.0 14 PDB header:cell adhesion
Chain: A: PDB Molecule:down syndrome cell adhesion molecule (dscam) isoform
PDBTitle: crystal structure of down syndrome cell adhesion molecule (dscam)2 isoform 1.30.30, n-terminal eight ig domains
2c2om5A_



100.0 20 PDB header:cell adhesion
Chain: A: PDB Molecule:contactin 2;
PDBTitle: n-terminal fragment of human tax1
3c3jxaA_



100.0 21 PDB header:cell adhesion
Chain: A: PDB Molecule:contactin 4;
PDBTitle: immunoglobulin domains 1-4 of mouse cntn4
4c4k0vA_



100.0 12 PDB header:signaling protein/transferase
Chain: A: PDB Molecule:tek tyrosine kinase variant;
PDBTitle: structural basis for angiopoietin-1 mediated signaling initiation
5c1p6fA_



100.0 9 PDB header:immune system
Chain: A: PDB Molecule:natural cytotoxicity triggering receptor 1;
PDBTitle: structure of the human natural cytotoxicity receptor nkp46
6c1ollA_



99.9 9 PDB header:immune system/receptor
Chain: A: PDB Molecule:nk receptor;
PDBTitle: extracellular region of the human receptor nkp46
7c3shsA_



99.9 18 PDB header:viral protein
Chain: A: PDB Molecule:hoc head outer capsid protein;
PDBTitle: three n-terminal domains of the bacteriophage rb49 highly immunogenic2 outer capsid protein (hoc)
8c1efxE_



99.9 14 PDB header:immune system
Chain: E: PDB Molecule:natural killer cell receptor kir2dl2;
PDBTitle: structure of a complex between the human natural killer2 cell receptor kir2dl2 and a class i mhc ligand hla-cw3
9c3o3uN_



99.9 16 PDB header:transport protein, signaling protein
Chain: N: PDB Molecule:maltose-binding periplasmic protein, advanced glycosylation
PDBTitle: crystal structure of human receptor for advanced glycation endproducts2 (rage)
10c1e4jA_



99.9 16 PDB header:immune system
Chain: A: PDB Molecule:low affinity immunoglobulin gamma fc receptor
PDBTitle: crystal structure of the soluble human fc-gamma2 receptor iii
11c3p3yA_



99.9 19 PDB header:cell adhesion
Chain: A: PDB Molecule:neurofascin;
PDBTitle: crystal structure of neurofascin homophilic adhesion complex in space2 group p6522
12c2y25C_



99.9 20 PDB header:structural protein
Chain: C: PDB Molecule:myomesin;
PDBTitle: crystal structure of the myomesin domains my11-my13
13c1e07A_



99.9 12 PDB header:glycoprotein
Chain: A: PDB Molecule:carcinoembryonic antigen;
PDBTitle: model of human carcinoembryonic antigen by homology2 modelling and curve-fitting to experimental solution3 scattering data
14c3oq3B_



99.9 19 PDB header:cytokine/viral protein
Chain: B: PDB Molecule:ifn-alpha/beta binding protein c12r;
PDBTitle: structural basis of type-i interferon sequestration by a poxvirus2 decoy receptor
15c2gy7B_



99.9 12 PDB header:signaling protein
Chain: B: PDB Molecule:angiopoietin-1 receptor;
PDBTitle: angiopoietin-2/tie2 complex crystal structure
16c3lafA_



99.9 15 PDB header:apoptosis
Chain: A: PDB Molecule:deleted in colorectal cancer;
PDBTitle: structure of dcc, a netrin-1 receptor
17c3sgjC_



99.9 17 PDB header:immune system
Chain: C: PDB Molecule:human fcg3a receptor;
PDBTitle: unique carbohydrate-carbohydrate interactions are required for high2 affinity binding between fcgiii and antibodies lacking core fucose
18c1g0xA_



99.9 17 PDB header:immune system
Chain: A: PDB Molecule:leucocyte immunoglobulin-like receptor-1;
PDBTitle: crystal structure of the ligand binding domain of lir-12 (ilt2)
19c1im9D_



99.9 15 PDB header:immune system
Chain: D: PDB Molecule:killer cell immunoglobulin-like receptor 2dl1;
PDBTitle: crystal structure of the human natural killer cell2 inhibitory receptor kir2dl1 bound to its mhc ligand hla-cw4
20c3qs7F_



99.9 12 PDB header:cytokine/signaling protein
Chain: F: PDB Molecule:fl cytokine receptor;
PDBTitle: crystal structure of a human flt3 ligand-receptor ternary complex
21c1sy6A_



not modelled 99.9 16 PDB header:signaling protein/antibiotic
Chain: A: PDB Molecule:t-cell surface glycoprotein cd3 gamma/epsilon
PDBTitle: crystal structure of cd3gammaepsilon heterodimer in complex2 with okt3 fab fragment
22c3p2tA_



not modelled 99.9 16 PDB header:immune system
Chain: A: PDB Molecule:leukocyte immunoglobulin-like receptor subfamily b member
PDBTitle: crystal structure of leukocyte ig-like receptor lilrb4 (ilt3/lir-2 5/cd85k)
23c3rjdA_



not modelled 99.9 19 PDB header:immune system
Chain: A: PDB Molecule:high affinity immunoglobulin gamma fc receptor i;
PDBTitle: crystal structure of fc ri and its implication to high affinity2 immunoglobulin g binding
24c3dmkB_



not modelled 99.9 19 PDB header:cell adhesion
Chain: B: PDB Molecule:down syndrome cell adhesion molecule (dscam) isoform
PDBTitle: crystal structure of down syndrome cell adhesion molecule (dscam)2 isoform 1.30.30, n-terminal eight ig domains
25c3vh8H_



not modelled 99.9 15 PDB header:immune system
Chain: H: PDB Molecule:killer cell immunoglobulin-like receptor 3dl1;
PDBTitle: kir3dl1 in complex with hla-b*5701
26c3rbsA_



not modelled 99.9 11 PDB header:contractile protein
Chain: A: PDB Molecule:myomesin-1;
PDBTitle: crystal structure of the myomesin domains 10 and 11
27c2gi7B_



not modelled 99.9 17 PDB header:blood clotting, cell adhesion
Chain: B: PDB Molecule:gpvi protein;
PDBTitle: crystal structure of human platelet glycoprotein vi (gpvi)
28c1b6uA_



not modelled 99.9 15 PDB header:killer cell inhibitory receptor
Chain: A: PDB Molecule:p58 killer cell inhibitory receptor;
PDBTitle: crystal structure of the human killer cell inhibitory2 receptor (kir2dl3) specific for hla-cw3 related alleles
29c1o0vA_



not modelled 99.9 17 PDB header:immune system
Chain: A: PDB Molecule:immunoglobulin heavy chain epsilon-1;
PDBTitle: the crystal structure of ige fc reveals an asymmetrically bent2 conformation
30c3f8uB_



not modelled 99.9 12 PDB header:immune system/isomerase
Chain: B: PDB Molecule:tapasin;
PDBTitle: tapasin/erp57 heterodimer
31c1iamA_



not modelled 99.9 12 PDB header:viral protein receptor
Chain: A: PDB Molecule:intercellular adhesion molecule-1;
PDBTitle: structure of the two amino-terminal domains of human intercellular2 adhesion molecule-1, icam-1
32c1ovzB_



not modelled 99.9 15 PDB header:immune system
Chain: B: PDB Molecule:immunoglobulin alpha fc receptor;
PDBTitle: crystal structure of human fcari
33c3alpB_



not modelled 99.9 13 PDB header:cell adhesion
Chain: B: PDB Molecule:poliovirus receptor-related protein 1;
PDBTitle: cell adhesion protein
34c1fcgA_



not modelled 99.9 16 PDB header:immune system, membrane protein
Chain: A: PDB Molecule:protein (fc receptor fc(gamma)riia);
PDBTitle: ectodomain of human fc gamma receptor, fcgriia
35c2d3vA_



not modelled 99.9 16 PDB header:immune system
Chain: A: PDB Molecule:leukocyte immunoglobulin-like receptor subfamily
PDBTitle: crystal structure of leukocyte ig-like receptor a52 (lilra5/lir9/ilt11)
36c2yd7A_



not modelled 99.9 14 PDB header:hydrolase
Chain: A: PDB Molecule:ptprd protein;
PDBTitle: crystal structure of the n-terminal ig1-2 module of human receptor2 protein tyrosine phosphatase delta
37c1p53A_



not modelled 99.9 11 PDB header:cell adhesion
Chain: A: PDB Molecule:intercellular adhesion molecule-1;
PDBTitle: the crystal structure of icam-1 d3-d5 fragment
38c1j89D_



not modelled 99.9 17 PDB header:immune system
Chain: D: PDB Molecule:high affinity immunoglobulin epsilon receptor alpha-
PDBTitle: human high affinity fc receptor fc(epsilon)ri(alpha), tetragonal2 crystal form 2
39c2y23A_



not modelled 99.9 11 PDB header:structural protein
Chain: A: PDB Molecule:myomesin;
PDBTitle: crystal structure of the myomesin domains my9-my11
40c1mq8C_



not modelled 99.9 12 PDB header:immune system
Chain: C: PDB Molecule:intercellular adhesion molecule-1;
PDBTitle: crystal structure of alphal i domain in complex with icam-1
41c3b43A_



not modelled 99.9 16 PDB header:structural protein
Chain: A: PDB Molecule:titin;
PDBTitle: i-band fragment i65-i70 from titin
42c3mjgX_



not modelled 99.9 13 PDB header:hormone/transferase
Chain: X: PDB Molecule:beta-type platelet-derived growth factor receptor;
PDBTitle: the structure of a platelet derived growth factor receptor complex
43c2o26X_



not modelled 99.9 13 PDB header:cytokine/signaling protein
Chain: X: PDB Molecule:mast/stem cell growth factor receptor;
PDBTitle: structure of a class iii rtk signaling assembly
44c1bihA_



not modelled 99.9 15 PDB header:insect immunity
Chain: A: PDB Molecule:hemolin;
PDBTitle: crystal structure of the insect immune protein hemolin: a2 new domain arrangement with implications for homophilic3 adhesion
45c3chnD_



not modelled 99.9 12 PDB header:immune system
Chain: D: PDB Molecule:ig alpha-1 chain c region;
PDBTitle: solution structure of human secretory iga1
46c1zvoC_



not modelled 99.9 16 PDB header:immune system
Chain: C: PDB Molecule:myeloma immunoglobulin d delta;
PDBTitle: semi-extended solution structure of human myeloma2 immunoglobulin d determined by constrained x-ray scattering
47c1dgiR_



not modelled 99.9 17 PDB header:virus/viral protein, receptor
Chain: R: PDB Molecule:poliovirus receptor;
PDBTitle:
48c2yd3A_



not modelled 99.9 15 PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase s;
PDBTitle: crystal structure of the n-terminal ig1-2 module of human2 receptor protein tyrosine phosphatase sigma
49c2v9qA_



not modelled 99.9 19 PDB header:receptor
Chain: A: PDB Molecule:roundabout homolog 1;
PDBTitle: first and second ig domains from human robo1
50c3chnS_



not modelled 99.9 10 PDB header:immune system
Chain: S: PDB Molecule:secretory component;
PDBTitle: solution structure of human secretory iga1
51c4hjjH_



not modelled 99.9 16 PDB header:immune system
Chain: H: PDB Molecule:anti-il12 anti-il18 dfab heavy chain;
PDBTitle: structure reveals function of the dual variable domain immunoglobulin2 (dvd-ig) molecule
52c3bn3B_



not modelled 99.9 13 PDB header:cell adhesion, immune system
Chain: B: PDB Molecule:intercellular adhesion molecule 5;
PDBTitle: crystal structure of icam-5 in complex with al i domain
53c2v5mA_



not modelled 99.9 16 PDB header:cell adhesion
Chain: A: PDB Molecule:dscam;
PDBTitle: structural basis for dscam isoform specificity
54c2yd9A_



not modelled 99.9 14 PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase s;
PDBTitle: crystal structure of the n-terminal ig1-3 module of human receptor2 protein tyrosine phosphatase sigma
55c1hzhK_



not modelled 99.9 10 PDB header:immune system
Chain: K: PDB Molecule:immunoglobulin heavy chain;
PDBTitle: crystal structure of the intact human igg b12 with broad and potent2 activity against primary hiv-1 isolates: a template for hiv vaccine3 design
56c4hjjL_



not modelled 99.9 14 PDB header:immune system
Chain: L: PDB Molecule:anti-il12 anti-il18 dfab light chain;
PDBTitle: structure reveals function of the dual variable domain immunoglobulin2 (dvd-ig) molecule
57c2rcjD_



not modelled 99.9 10 PDB header:immune system
Chain: D: PDB Molecule:light chain;
PDBTitle: solution structure of human immunoglobulin m
58c3sgjA_



not modelled 99.9 11 PDB header:immune system
Chain: A: PDB Molecule:human fc fragment;
PDBTitle: unique carbohydrate-carbohydrate interactions are required for high2 affinity binding between fcgiii and antibodies lacking core fucose
59c2yd4A_



not modelled 99.9 14 PDB header:hydrolase
Chain: A: PDB Molecule:protein-tyrosine phosphatase crypalpha1 isoform;
PDBTitle: crystal structure of the n-terminal ig1-2 module of chicken receptor2 protein tyrosine phosphatase sigma
60c2yd2A_



not modelled 99.9 15 PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase s;
PDBTitle: crystal structure of the n-terminal ig1-2 module of human2 receptor protein tyrosine phosphatase sigma
61c1qgc4_



not modelled 99.9 12 PDB header:virus/immune system
Chain: 4: PDB Molecule:protein (immunoglobulin);
PDBTitle: structure of the complex of an fab fragment of a neutralizing antibody2 with foot and mouth disease virus
62c2ec8A_



not modelled 99.9 17 PDB header:transferase
Chain: A: PDB Molecule:mast/stem cell growth factor receptor;
PDBTitle: crystal structure of the exctracellular domain of the receptor2 tyrosine kinase, kit
63c4fomA_



not modelled 99.9 16 PDB header:cell adhesion
Chain: A: PDB Molecule:poliovirus receptor-related protein 3;
PDBTitle: crystal structure of human nectin-3 full ectodomain (d1-d3)
64c1vcaA_



not modelled 99.9 14 PDB header:cell adhesion protein
Chain: A: PDB Molecule:human vascular cell adhesion molecule-1;
PDBTitle: crystal structure of an integrin-binding fragment of2 vascular cell adhesion molecule-1 at 1.8 angstroms3 resolution
65c1l6zA_



not modelled 99.9 20 PDB header:cell adhesion
Chain: A: PDB Molecule:biliary glycoprotein c;
PDBTitle: crystal structure of murine ceacam1a[1,4]: a coronavirus receptor and2 cell adhesion molecule in the cea family
66c3pxjD_



not modelled 99.9 20 PDB header:hydrolase
Chain: D: PDB Molecule:tyrosine-protein phosphatase lar;
PDBTitle: tandem ig repeats of dlar
67c3nl4L_



not modelled 99.9 13 PDB header:immune system
Chain: L: PDB Molecule:antigen binding fragment, immunoglobulin igg - light chain;
PDBTitle: crystal structure of amyloid prefibrillar oligomer-specific rabbit fab
68c3qs9F_



not modelled 99.9 13 PDB header:cytokine/signaling protein
Chain: F: PDB Molecule:fl cytokine receptor;
PDBTitle: crystal structure of a human flt3 ligand-receptor ternary complex
69c2wimA_



not modelled 99.9 18 PDB header:cell adhesion
Chain: A: PDB Molecule:neural cell adhesion molecule 2;
PDBTitle: crystal structure of ncam2 ig1-3
70c3do3A_



not modelled 99.9 12 PDB header:immune system
Chain: A: PDB Molecule:ig gamma-1 chain c region;
PDBTitle: human 1gg1 fc fragment, 2.5 angstrom structure
71c3v2aR_



not modelled 99.9 13 PDB header:hormone/signaling protein
Chain: R: PDB Molecule:vascular endothelial growth factor receptor 2;
PDBTitle: vegfr-2/vegf-a complex structure
72c2r15A_



not modelled 99.9 17 PDB header:contractile protein
Chain: A: PDB Molecule:myomesin-1;
PDBTitle: crystal structure of the myomesin domains 12 and 13
73c1zxqA_



not modelled 99.9 16 PDB header:cell adhesion
Chain: A: PDB Molecule:intercellular adhesion molecule-2;
PDBTitle: the crystal structure of icam-2
74c3v6bR_



not modelled 99.9 13 PDB header:hormone/signaling protein
Chain: R: PDB Molecule:vascular endothelial growth factor receptor 2;
PDBTitle: vegfr-2/vegf-e complex structure
75c2rikA_



not modelled 99.9 16 PDB header:structural protein
Chain: A: PDB Molecule:titin;
PDBTitle: i-band fragment i67-i69 from titin
76c2v5rB_



not modelled 99.9 13 PDB header:cell adhesion
Chain: B: PDB Molecule:dscam;
PDBTitle: structural basis for dscam isoform specificity
77c2x1xR_



not modelled 99.9 13 PDB header:hormone/signaling protein
Chain: R: PDB Molecule:vascular endothelial growth factor receptor 2;
PDBTitle: crystal structure of vegf-c in complex with domains 2 and 32 of vegfr2 in a tetragonal crystal form
78c1i1cB_



not modelled 99.9 14 PDB header:immune system
Chain: B: PDB Molecule:ig gamma-2a chain c region;
PDBTitle: non-fcrn binding fc fragment of rat igg2a
79c1igyB_



not modelled 99.9 13 PDB header:immunoglobulin
Chain: B: PDB Molecule:igg1 intact antibody mab61.1.3;
PDBTitle: structure of immunoglobulin
80c2wahA_



not modelled 99.9 13 PDB header:immune system
Chain: A: PDB Molecule:ig gamma-1 chain c region;
PDBTitle: crystal structure of an igg1 fc glycoform (man9glcnac2)
81c2ql1A_



not modelled 99.9 14 PDB header:immune system
Chain: A: PDB Molecule:ighm protein;
PDBTitle: structural characterization of a mutated, adcc-enhanced human fc2 fragment
82c1djsA_



not modelled 99.9 19 PDB header:hormone/growth factor/receptor
Chain: A: PDB Molecule:protein (fibroblast growth factor receptor 2);
PDBTitle: ligand-binding portion of fibroblast growth factor receptor 2 in2 complex with fgf1
83c3ejjX_



not modelled 99.9 15 PDB header:cytokine/signaling protein
Chain: X: PDB Molecule:macrophage colony-stimulating factor 1 receptor;
PDBTitle: structure of m-csf bound to the first three domains of fms
84c2j6eA_



not modelled 99.9 12 PDB header:immune system
Chain: A: PDB Molecule:ig gamma-1 chain c region;
PDBTitle: crystal structure of an autoimmune complex between a human2 igm rheumatoid factor and igg1 fc reveals a novel fc3 epitope and evidence for affinity maturation
85c2wngA_



not modelled 99.9 12 PDB header:cell adhesion
Chain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type
PDBTitle: complete extracellular structure of human signal regulatory2 protein (sirp) alpha
86c3qs9E_



not modelled 99.9 12 PDB header:cytokine/signaling protein
Chain: E: PDB Molecule:fl cytokine receptor;
PDBTitle: crystal structure of a human flt3 ligand-receptor ternary complex
87c3dnkA_



not modelled 99.9 12 PDB header:immune system
Chain: A: PDB Molecule:ighm protein;
PDBTitle: enzyme deglycosylated human igg1 fc fragment
88c4dz8B_



not modelled 99.9 11 PDB header:immune system
Chain: B: PDB Molecule:ig gamma-1 chain c region;
PDBTitle: human igg1 fc fragment heterodimer
89c2druA_



not modelled 99.9 17 PDB header:immune system
Chain: A: PDB Molecule:chimera of cd48 antigen and t-cell surface antigen cd2;
PDBTitle: crystal structure and binding properties of the cd2 and cd244 (2b4)2 binding protein, cd48
90c4fn0B_



not modelled 99.9 15 PDB header:cell adhesion
Chain: B: PDB Molecule:poliovirus receptor-related protein 2;
PDBTitle: crystal structure of mouse nectin-2 extracellular fragment d1-d2, 2nd2 crystal form
91c1za6H_



not modelled 99.9 14 PDB header:immune system
Chain: H: PDB Molecule:igg heavy chain;
PDBTitle: the structure of an antitumor ch2-domain-deleted humanized2 antibody
92c1z7zI_



not modelled 99.9 13 PDB header:virus/receptor
Chain: I: PDB Molecule:intercellular adhesion molecule-1;
PDBTitle: cryo-em structure of human coxsackievirus a21 complexed with five2 domain icam-1kilifi
93c1iraY_



not modelled 99.9 18 PDB header:complex (cytokine receptor/antagonist)
Chain: Y: PDB Molecule:interleukin-1 receptor;
PDBTitle: complex of the interleukin-1 receptor with the interleukin-1 receptor2 antagonist (il1ra)
94c1w72L_



not modelled 99.9 12 PDB header:immune system
Chain: L: PDB Molecule:hyb3 light chain;
PDBTitle: crystal structure of hla-a1:mage-a1 in complex with fab-2 hyb3
95c1igtB_



not modelled 99.9 13 PDB header:immunoglobulin
Chain: B: PDB Molecule:igg2a intact antibody - mab231;
PDBTitle: structure of immunoglobulin
96c1hezD_



not modelled 99.9 10 PDB header:antibody
Chain: D: PDB Molecule:heavy chain of ig;
PDBTitle: antibody-antigen complex
97c3fjtB_



not modelled 99.9 11 PDB header:immune system
Chain: B: PDB Molecule:ig gamma-1 chain c region;
PDBTitle: crystal structure of a human fc fragment engineered for extended serum2 half-life
98c2pf6A_



not modelled 99.9 21 PDB header:cell adhesion
Chain: A: PDB Molecule:lutheran blood group glycoprotein;
PDBTitle: lutheran glycoprotein, n-terminal domains 1 and 2
99c4iiqC_



not modelled 99.9 22 PDB header:immune system
Chain: C: PDB Molecule:beta-2-microglobulin, mhc class i-related protein;
PDBTitle: crystal structure of a human mait tcr in complex with bovine mr1
100c3sgjB_



not modelled 99.8 10 PDB header:immune system
Chain: B: PDB Molecule:human fc fragment;
PDBTitle: unique carbohydrate-carbohydrate interactions are required for high2 affinity binding between fcgiii and antibodies lacking core fucose
101c3pxhA_



not modelled 99.8 14 PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase f;
PDBTitle: tandem ig domains of tyrosine phosphatase lar
102c1hngB_



not modelled 99.8 13 PDB header:t lymphocyte adhesion glycoprotein
Chain: B: PDB Molecule:cd2;
PDBTitle: crystal structure at 2.8 angstroms resolution of a soluble2 form of the cell adhesion molecule cd2
103c1ypzE_



not modelled 99.8 16 PDB header:immune system
Chain: E: PDB Molecule:t cell receptor delta;
PDBTitle: immune receptor
104c1cczA_



not modelled 99.8 17 PDB header:glycoprotein
Chain: A: PDB Molecule:protein (cd58);
PDBTitle: crystal structure of the cd2-binding domain of cd58 (lymphocyte2 function-associated antigen 3) at 1.8-a resolution
105c2gj7A_



not modelled 99.8 12 PDB header:immune system/virus/viral protein
Chain: A: PDB Molecule:ig gamma-1 chain c region;
PDBTitle: crystal structure of a ge-gi/fc complex
106c2gj7B_



not modelled 99.8 12 PDB header:immune system/virus/viral protein
Chain: B: PDB Molecule:ig gamma-1 chain c region;
PDBTitle: crystal structure of a ge-gi/fc complex
107c3dnkB_



not modelled 99.8 12 PDB header:immune system
Chain: B: PDB Molecule:ighm protein;
PDBTitle: enzyme deglycosylated human igg1 fc fragment
108c3mlwL_



not modelled 99.8 13 PDB header:immune system
Chain: L: PDB Molecule:human monoclonal anti-hiv-1 gp120 v3 antibody 1006-15d fab
PDBTitle: crystal structure of anti-hiv-1 v3 fab 1006-15d in complex with an mn2 v3 peptide
109c1pkqF_



not modelled 99.8 12 PDB header:immune system
Chain: F: PDB Molecule:(8-18c5) chimeric fab, light chain;
PDBTitle: myelin oligodendrocyte glycoprotein-(8-18c5) fab-complex
110c2e9wB_



not modelled 99.8 15 PDB header:transferase/hormone
Chain: B: PDB Molecule:mast/stem cell growth factor receptor;
PDBTitle: crystal structure of the extracellular domain of kit in complex with2 stem cell factor (scf)
111c3s7gD_



not modelled 99.8 13 PDB header:immune system
Chain: D: PDB Molecule:ig gamma-1 chain c region;
PDBTitle: aglycosylated human igg1 fc fragment
112c3o4oB_



not modelled 99.8 14 PDB header:immune system
Chain: B: PDB Molecule:interleukin-1 receptor accessory protein;
PDBTitle: crystal structure of an interleukin-1 receptor complex
113c1qokA_



not modelled 99.8 20 PDB header:immunoglobulin
Chain: A: PDB Molecule:mfe-23 recombinant antibody fragment;
PDBTitle: mfe-23 an anti-carcinoembryonic antigen single-chain fv2 antibody
114c2vuoB_



not modelled 99.8 13 PDB header:immune system
Chain: B: PDB Molecule:ig gamma chain c region;
PDBTitle: crystal structure of the rabbit igg fc fragment
115c4acpA_



not modelled 99.8 14 PDB header:immune system
Chain: A: PDB Molecule:ig gamma-1 chain c region;
PDBTitle: deactivation of human igg1 fc by endoglycosidase treatment
116c1qseD_



not modelled 99.8 11 PDB header:immune system
Chain: D: PDB Molecule:protein (hman t-cell receptor);
PDBTitle: structure of human a6-tcr bound to hla-a2 complexed with2 altered htlv-1 tax peptide v7r
117c1hnfA_



not modelled 99.8 14 PDB header:t lymphocyte adhesion glycoprotein
Chain: A: PDB Molecule:cd2;
PDBTitle: crystal structure of the extracellular region of the human cell2 adhesion molecule cd2 at 2.5 angstroms resolution
118c3ay4A_



not modelled 99.8 13 PDB header:immune system
Chain: A: PDB Molecule:ig gamma-1 chain c region;
PDBTitle: crystal structure of nonfucosylated fc complexed with bis-glycosylated2 soluble form of fc gamma receptor iiia
119c1aqkL_



not modelled 99.8 15 PDB header:immunoglobulin
Chain: L: PDB Molecule:fab b7-15a2;
PDBTitle: three-dimensional structure of a human fab with high2 affinity for tetanus toxoid
120c3b5hB_



not modelled 99.8 12 PDB header:cell invasion
Chain: B: PDB Molecule:cervical emmprin;
PDBTitle: crystal structure of the extracellular portion of hab18g/cd147

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