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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2om5A_

Fold library idPDB HeaderMoleculeTitle
c2om5A_PDB header: cell adhesionChain: A: PDB Molecule: contactin 2;PDBTitle: n-terminal fragment of human tax1


Added to library: Tue Mar 16 13:39:19 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TFGPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKA
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Known secondary structure (DSSP)




SS
S
S

S

TT



TT
STTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence QDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKAHEGWGVMLPCNPPAHYPGLSYRWLLNEF
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Known secondary structure (DSSP)
TT






SS





TTS






S

SST
 .........150.........160.........170.........180.........190.........200.........210
Sequence PNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKA
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Known secondary structure (DSSP) T
B


SSS
SSS

SS

STT
TT



S




 .........220.........230.........240.........250.........260.........270.........280
Sequence RFPAETYALVGQQVTLECFAFGNPVPRIKWRKVAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIV
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Known secondary structure (DSSP)


STT


S




SSS

GGG
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence QAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGEPLASQNRVEVLAGDLRFSKLSLEDSGMY
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TT



SSS

SSSB


BTTTTSS

GGG
S
 .........360.........370.
Sequence QCVAENKHGTIYASAELAVQA
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Known secondary structure (DSSP)
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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