PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3do3A_

Fold library id	PDB Header	Molecule	Title
c3do3A_	PDB header: immune system	Chain: A: PDB Molecule: ig gamma-1 chain c region;	PDBTitle: human 1gg1 fc fragment, 2.5 angstrom structure

Links to external resources
Added to library: Sun Aug 29 08:10:20 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G G P S V F L F P P K P K D T L M I S R T P E V T C V V V D V S H E D P E V K F N W Y V D G V E V H N A K T K P R E E Q Y N S T Y R V V S V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T S
T T
B
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L T V L H Q D W L N G K E Y K C K V S N K A L P A P I E K T I S K A K G Q P R E P Q V Y T L P P S R E E M T K N Q V S L T C L V K G F Y P S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S S
S
S S
B
G G G T T S S
B S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . .

Sequence D I A V E W E S N G Q P E N N Y K T T P P V L D S D G S F F L Y S K L T V D K S R W Q Q G N V F S C S V M H E A L H N H Y T Q K S L S L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S
T T T
T T S G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	G	P	S	V	F	L	F	P	P	K	P	K	D	T	L	M	I	S	R	T	P	E	V	T	C	V	V	V	D	V	S	H	E	D	P	E	V	K	F	N	W	Y	V	D	G	V	E	V	H	N	A	K	T	K	P	R	E	E	Q	Y	N	S	T	Y	R	V	V	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	S													T	T	S										T	T													B		S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	T	V	L	H	Q	D	W	L	N	G	K	E	Y	K	C	K	V	S	N	K	A	L	P	A	P	I	E	K	T	I	S	K	A	K	G	Q	P	R	E	P	Q	V	Y	T	L	P	P	S	R	E	E	M	T	K	N	Q	V	S	L	T	C	L	V	K	G	F	Y	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T										T	T		S	S								S		S	S			B											G	G	G	T	T	S	S												B	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Sequence	D	I	A	V	E	W	E	S	N	G	Q	P	E	N	N	Y	K	T	T	P	P	V	L	D	S	D	G	S	F	F	L	Y	S	K	L	T	V	D	K	S	R	W	Q	Q	G	N	V	F	S	C	S	V	M	H	E	A	L	H	N	H	Y	T	Q	K	S	L	S	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T															T	T	S																T	T	T										T	T	S	G	G	G