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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1qgc4_

Fold library idPDB HeaderMoleculeTitle
c1qgc4_PDB header: virus/immune systemChain: 4: PDB Molecule: protein (inmunoglobuline);PDBTitle: structure of the complex of an fab fragment of a2 neutralizing antibody with foot and mouth disease virus


Added to library: Tue Mar 16 14:09:19 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DIVLTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSG
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Known secondary structure (DSSP)



S
TTS
SS

TT

TTS

SSSS
B
SS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SRTDFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFL
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Known secondary structure (DSSP) TTSS

GGG

SSTT

B






B




TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIV
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Known secondary structure (DSSP) BSS
TT
TT


TTT

T

TT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KSFNRNEEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDS
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Known secondary structure (DSSP) TT





TT

SS
GGGS
TTT
TTS



GG
 .........290.........300.........310.........320.........330.........340.........350
Sequence VKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAP
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Known secondary structure (DSSP) GTTTTTTT
S

GGG



SSS




SB



SS

B



 .........360.........370.........380.........390.........400.........410.........420
Sequence GSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCN
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Known secondary structure (DSSP)
GGG

SSS
BSS

GGGT

SS


TTS

 .........430.......
Sequence VAHPASSTKVDKKIVPR
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Known secondary structure (DSSP) GGGT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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