PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2pf6A_

Fold library id	PDB Header	Molecule	Title
c2pf6A_	PDB header: cell adhesion	Chain: A: PDB Molecule: lutheran blood group glycoprotein;	PDBTitle: lutheran glycoprotein, n-terminal domains 1 and 2

Links to external resources
Added to library: Tue Mar 16 13:35:55 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E V R L S V P P L V E V M R G K S V I L D C T P T G T H D H Y M L E W F L T D R S G A R P R L A S A E M Q G S E L Q V T M H D T R G R S P P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S
S
T T S
T T
S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y Q L D S Q G R L V L A E A Q V G D E R D Y V C V V R A G A A G T A E A T A R L N V F A K P E A T E V S P N K G T L S V M E D S A Q E I A T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S
G G G
G G G
B
S S
S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence C N S R N G N P A P K I T W Y R N G Q R L E V P V E M N P E G Y M T S R T V R E A S G L L S L T S T L Y L R L R K D D R D A S F H C A A H Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B S
T T
S S
S S
T T S
G G G G S

. . . . . . . . . 220 . . . . . . . . . 230 .

Sequence S L P E G R H G R L D S P T F H L T L H Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	V	R	L	S	V	P	P	L	V	E	V	M	R	G	K	S	V	I	L	D	C	T	P	T	G	T	H	D	H	Y	M	L	E	W	F	L	T	D	R	S	G	A	R	P	R	L	A	S	A	E	M	Q	G	S	E	L	Q	V	T	M	H	D	T	R	G	R	S	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S						T	T											S			S											T	T	S												T	T									S	S			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	Q	L	D	S	Q	G	R	L	V	L	A	E	A	Q	V	G	D	E	R	D	Y	V	C	V	V	R	A	G	A	A	G	T	A	E	A	T	A	R	L	N	V	F	A	K	P	E	A	T	E	V	S	P	N	K	G	T	L	S	V	M	E	D	S	A	Q	E	I	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S					S	S			G	G	G											G	G	G													B												S	S			S	S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	N	S	R	N	G	N	P	A	P	K	I	T	W	Y	R	N	G	Q	R	L	E	V	P	V	E	M	N	P	E	G	Y	M	T	S	R	T	V	R	E	A	S	G	L	L	S	L	T	S	T	L	Y	L	R	L	R	K	D	D	R	D	A	S	F	H	C	A	A	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B	S									T	T							S	S			S	S											T	T	S														G	G	G	G	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Sequence	S	L	P	E	G	R	H	G	R	L	D	S	P	T	F	H	L	T	L	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G