Fold library entry viewer: c3dmkB_

Added to library: Tue Mar 16 13:26:50 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	K	G	P	V	F	L	K	E	P	T	N	R	I	D	F	S	N	S	T	G	A	E	I	E	C	K	A	S	G	N	P	M	P	E	I	I	W	I	R	S	D	G	T	A	V	G	D	V	P	G	L	R	Q	I	S	S	D	G	K	L	V	F	P	P	F	R	A	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S						T	T	T												S									T	T	S		B				B	T	T	T	B				S	T	T									G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	R	Q	E	V	H	A	Q	V	Y	A	C	L	A	R	N	Q	F	G	S	I	I	S	R	D	V	H	V	R	A	V	V	A	Q	Y	Y	E	A	D	V	N	K	E	H	V	I	R	G	N	S	A	V	I	K	C	L	I	P	S	F	V	A	D	F	V	E	V	V	S	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T																					B								T	T	S							B							T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	T	D	E	E	E	N	Y	F	P	G	A	E	Y	D	G	K	Y	L	V	L	P	S	G	E	L	H	I	R	E	V	G	P	E	D	G	Y	K	S	Y	Q	C	R	T	K	H	R	L	T	G	E	T	R	L	S	A	T	K	G	R	L	V	I	T	E	P	I	S	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S					B	S	S		B	T	T	T					T	T	S					S	S			G	G	G	S	S										T	T	T							S	B											S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	P	K	V	V	S	L	A	K	F	D	M	K	T	Y	S	G	S	S	T	M	A	L	L	C	P	A	Q	G	Y	P	V	P	V	F	R	W	Y	K	F	I	E	G	T	T	R	K	Q	A	V	V	L	N	D	R	V	K	Q	V	S	G	T	L	I	I	K	D	A	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B			G	G	G	G								T	T	S									B		S	S											T	T	S	S								S	S	S					T	T						S			G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	D	S	G	K	Y	L	C	V	V	N	N	S	V	G	G	E	S	V	E	T	V	L	T	V	T	A	P	L	S	A	K	I	D	P	P	T	Q	T	V	D	F	G	R	P	A	V	F	T	C	Q	Y	T	G	N	P	I	K	T	V	S	W	M	K	D	G	K	A	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G											S	S																					S	S						T	T	S																					T	T				S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	H	S	E	S	V	L	R	I	E	S	V	K	K	E	D	K	G	M	Y	Q	C	F	V	R	N	D	R	E	S	A	E	A	S	A	E	L	K	L	G	G	R	F	D	P	P	V	I	R	Q	A	F	Q	E	E	T	M	E	P	G	P	S	V	F	L	K	C	V	A	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S					S	S			G	G	G											S	S														S	S																S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	P	T	P	E	I	S	W	E	L	D	G	K	K	I	A	N	N	D	R	Y	Q	V	G	Q	Y	V	T	V	N	G	D	V	V	S	Y	L	N	I	T	S	V	H	A	N	D	G	G	L	Y	K	C	I	A	K	S	K	V	G	V	A	E	H	S	A	K	L	N	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S									T	T					S		T	T									T	T	S									S	S			T	T	T											T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	L	P	Y	I	R	Q	M	E	K	K	A	I	V	A	G	E	T	L	I	V	T	C	P	V	A	G	Y	P	I	D	S	I	V	W	E	R	D	N	R	A	L	P	I	N	R	K	Q	K	V	F	P	N	G	T	L	I	I	E	N	V	E	R	N	S	D	Q	A	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S													T	T												S	S									T	T			S			S	T	T					T	T	S					S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	C	V	A	K	N	Q	E	G	Y	S	A	R	G	S	L	E	V	Q	V	M	V	L	P	R	I	I	P	F	A	F	E	E	G	P	A	Q	V	G	Q	Y	L	T	L	H	C	S	V	P	G	G	D	L	P	L	N	I	D	W	T	L	D	G	Q	A	I	S	E	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S																		B						S	S				S	S								B				S	S	S									T	T	B				G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
Sequence	G	I	T	T	S	R	V	G	R	R	G	S	V	L	T	I	E	A	V	E	A	S	H	A	G	N	F	T	C	H	A	R	N	L	A	G	H	Q	Q	F	T	T	P	L	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							T	T	T								S			G	G	G											S	S

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PDB structure

FASTA sequence

Hidden Markov model

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