Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1e07A_

Fold library idPDB HeaderMoleculeTitle
c1e07A_PDB header: glycoproteinChain: A: PDB Molecule: carcinoembryonic antigen;PDBTitle: model of human carcinoembryonic antigen by homology2 modelling and curve-fitting to experimental solution3 scattering data


Added to library: Tue Mar 16 13:58:55 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KLTIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPN
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)


S
S

B
TT



SS






TTS




SS


SSTT


SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVAFTCEPETQDA
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
S

TTS
S
SSS







B






SSTTTTS


SS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISP
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)

SS



SS
SS

SS

GGG
S


TTT



S
SS



 .........220.........230.........240.........250.........260.........270.........280
Sequence LNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVT
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) TT

SS
SS
TT


SS
B


S
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVT
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)

S

TTTT
TTS
S
SS
SS



SS

SS
SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence RNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGN
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) GGG
STTTT


SS
SS




SSTT


SS
SS
SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence IQQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCE
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)

SS

S
TTTT

S

TTTTTTS

 .........500.........510.........520.........530.........540.........550.........560
Sequence PEAQNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPD
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) S
SSTTS


SS
TT
SS

GGG
STTTT


S
 .........570.........580.........590.........600.........610.........620.........630
Sequence TPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHTQVLFIAKITPNNNGTYACFVSNLATGR
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) SS



TT

SS
SS
TT


SS


S
TTTT
 .........640..
Sequence NNSIVKSITVSA
Predicted secondary structure
SS confidence











Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D