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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3shsA_

Fold library idPDB HeaderMoleculeTitle
c3shsA_PDB header: viral proteinChain: A: PDB Molecule: hoc head outer capsid protein;PDBTitle: three n-terminal domains of the bacteriophage rb49 highly immunogenic2 outer capsid protein (hoc)


Added to library: Mon Jul 4 04:29:35 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTATLTVADATSENAGSYKVTV
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Known secondary structure (DSSP)
S
SSB
TT

SSS



TT
S

SSSS

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence QDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVI
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Known secondary structure (DSSP) TTT





B

SS
S
SS

TTS

SSTT


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DTTQDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSED
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Known secondary structure (DSSP) SSS
S

GGG
SSSGGG




STTS


 .........220.........230.........240.........250.........260.........270.........280
Sequence IVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAKLYQ
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Known secondary structure (DSSP)

S

TT


TT

S
SSS
GGG
TTS
SS

GGG
 .........290.........300...
Sequence QIEDETVEVAASTSRKCSMEVVK
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Known secondary structure (DSSP)
SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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