PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3ejjX_

Fold library id	PDB Header	Molecule	Title
c3ejjX_	PDB header: cytokine/signaling protein	Chain: X: PDB Molecule: macrophage colony-stimulating factor 1 receptor;	PDBTitle: structure of m-csf bound to the first three domains of fms

Links to external resources
Added to library: Tue Mar 16 13:59:28 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A P V I E P S G P E L V V E P G E T V T L R C V S N G S V E W D G P I S P Y W T L D P E S P G S T L T T R N A T F K N T G T Y R C T E L E S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T
S S
S
S S S S
S S
S S
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T T I H L Y V K D P A H S W N L L A Q E V T V V E G Q E A V L P C L I T D P A L K D S V S L M R E G G R Q V L R K T V Y F F S P W R G F I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S T T S
S
G G G G G S G G G
T T
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R K A K V L D S N T Y V C K T M V N G R E S T S T G I W L K V N R V H P E P P Q I K L E P S K L V R I R G E A A Q I V C S A T N A E V G F N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
G G G
T T
S S
S S S
S S S
S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . .

Sequence V I L K R G D T K L E I P L N S D F Q D N Y Y K K V R A L S L N A V D F Q D A G I Y S C V A S N D V G T R T A T M N F Q V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S S S
S S S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	P	V	I	E	P	S	G	P	E	L	V	V	E	P	G	E	T	V	T	L	R	C	V	S	N	G	S	V	E	W	D	G	P	I	S	P	Y	W	T	L	D	P	E	S	P	G	S	T	L	T	T	R	N	A	T	F	K	N	T	G	T	Y	R	C	T	E	L	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S		S	S						T	T										S	S							S		S	S	S	S						S	S							S	S			G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	T	I	H	L	Y	V	K	D	P	A	H	S	W	N	L	L	A	Q	E	V	T	V	V	E	G	Q	E	A	V	L	P	C	L	I	T	D	P	A	L	K	D	S	V	S	L	M	R	E	G	G	R	Q	V	L	R	K	T	V	Y	F	F	S	P	W	R	G	F	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S		S				S		S						T	T	S									S		G	G	G	G	G	S						G	G	G					T	T							T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	K	A	K	V	L	D	S	N	T	Y	V	C	K	T	M	V	N	G	R	E	S	T	S	T	G	I	W	L	K	V	N	R	V	H	P	E	P	P	Q	I	K	L	E	P	S	K	L	V	R	I	R	G	E	A	A	Q	I	V	C	S	A	T	N	A	E	V	G	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S			G	G	G											T	T														S	S											S	S	S					S	S	S											S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Sequence	V	I	L	K	R	G	D	T	K	L	E	I	P	L	N	S	D	F	Q	D	N	Y	Y	K	K	V	R	A	L	S	L	N	A	V	D	F	Q	D	A	G	I	Y	S	C	V	A	S	N	D	V	G	T	R	T	A	T	M	N	F	Q	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T													S	S	S										S	S			S	S	S											S	S