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Job DescriptionA1YIY0
Confidence99.89%DateTue Jul 30 13:19:15 BST 2013
Rank53Aligned Residues156
% Identity16%Templatec2v5mA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:dscam; PDBTitle: structural basis for dscam isoform specificity
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70. ........80.....
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Query Sequence  ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . . . . VFSAEAKEENSGLY
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Template Sequence  VAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKY
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   226...230.........240.........250.........260.........270.........280.....
 
   86...90.........100.........110.........120.........130.........140.....
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Query Sequence  QCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPIF
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Template Sequence  LCVVNNSVGGESVETV. . . . . . LTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPI. KT
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   286...290.........300. ........310.........320.........330...... ..
 
   146...150.........160.........170.........180.........190.........200.
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Query Sequence  YSFYINGEILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNISREISELKKFPL
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Template Sequence  VSWMKDGKAIGHS. . . . . . ESVLRIESVKKEDKGMYQCFVRNDRESAEAS. AELKL
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   339340.........350. ........360.........370.........380.. .....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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