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Job DescriptionA1YIY0
Confidence99.70%DateTue Jul 30 13:19:15 BST 2013
Rank374Aligned Residues161
% Identity14%Templatec2nx5D_
PDB info PDB header:immune systemChain: D: PDB Molecule:els4 tcr alpha chain; PDBTitle: crystal structure of els4 tcr bound to hla-b*3501 presenting ebv2 peptide eplpqgqltay at 1.7a
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.... ...
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Query Sequence  QEQFPNPELTEFTNSETMDVILKCTIKVDPKNPTLQLF. . . . . . . . . . . . . . . . . . . YTF
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Template Sequence  QNIDQPTEMTAT. . . EGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKG
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   1........10.. .......20.........30.........40.........50.......
 
   58.60.........70.........80.........90....... ..100.........110......
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Query Sequence  YKNNHVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQ. KKSGYLDIQFWTPVSHPVL
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Template Sequence  RFSSFLSRSKGYSYLLLKELQMKDSASYLCAVQASGGSYIPTFGRGTSLIVHPYIQNPDP
Template Known Secondary structure  TTTTT
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GGG
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   61........70.........80.........90.........100.........110.........120
 
   117..120.........130.........140.........150.........160... ......170....
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Query Sequence  TLQHEATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. . RAASLLASVKA
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Template Sequence  AV. . . YQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVA
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SSSS


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   124. ....130.........140.........150.........160.........170.........180
 
   175....180...
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Query Sequence  EWSTKNYSC
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Template Sequence  WSNKSDFAC
Template Known Secondary structure  SSSS

T
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   181........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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