Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.94%DateTue Jul 30 13:19:15 BST 2013
Rank12Aligned Residues181
% Identity20%Templatec2y25C_
PDB info PDB header:structural proteinChain: C: PDB Molecule:myomesin; PDBTitle: crystal structure of the myomesin domains my11-my13
Resolution3.50 Å
Model Dimensions (Å)X:69.114 Y:110.640 Z:28.018

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20......... 30.........40.........50.........60.........70. .
Predicted Secondary structure 






...















..
Query SS confidence 











. . .









































. .
Query Sequence  EQFPNPELTEFT. . . NSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . V
Query Conservation    

 
 
    ...  

  


 
     
                         ..
Alig confidence 











...



















....

















..
Template Conservation   
   
 
  
    
 

  
 
 
 
    
  .... 
 
 
 
  
         
Template Sequence  DPFTGPHFVEYLSWEVTGECNVLLKCKVANIKKET. . . . HIVWYKDEREISVDEKGICTL
Template Known Secondary structure 
SSS

TTTS

TT
....TT

S



Template Predicted Secondary structure 



















....







Template SS confidence 



























































   1353......1360.........1370.........1380....... ..1390.........1400........
 
   73......80.........90.........100........
Predicted Secondary structure 















........................
Query SS confidence 



































. . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  FSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFW. . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation   
  
   
 
 
 
 
 
                 ........................
Alig confidence 



































........................
Template Conservation   
      
 
 
                  
                            
Template Sequence  LITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAE
Template Known Secondary structure  TT

STT
S
SSS




STT
B



SS
Template Predicted Secondary structure 



















Template SS confidence 



























































   1414.....1420.........1430.........1440.........1450.........1460.........1470...
 
  
Predicted Secondary structure  ............................................................
Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                            
 
      
 
 
 
  
Template Sequence  GIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMEL
Template Known Secondary structure  BSS

SS
SSSB



SS
SSS

GGG
Template Predicted Secondary structure 
























Template SS confidence 



























































   1474.....1480.........1490.........1500.........1510.........1520.........1530...
 
   109110.........120.........130....
Predicted Secondary structure  ..................................










Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

























Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TPVSHPVLTLQHEATNLAVGDKVEFL
Query Conservation  ..................................                
  
    
 
Alig confidence  ..................................

























Template Conservation                                                    
  
    
 
Template Sequence  FDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLT
Template Known Secondary structure 
SS

TTTS



STTSB

Template Predicted Secondary structure 






























Template SS confidence 



























































   1534.....1540.........1550.........1560.........1570.........1580.........1590...
 
   135....140.........150.........160.. .......170.........180.........
Predicted Secondary structure 












.....






Query SS confidence 



























. . . . .


























Query Sequence  CEAHQGSLPIFYSFYINGEILGKPLAPS. . . . . GRAASLLASVKAEWSTKNYSCEAKNNI
Query Conservation 
            
 
 
          .....     
 
  
   
 
 
 
 
 
  
Alig confidence 







.


















.....


























Template Conservation 
   
 
 .  
 
   
  
                 
 
  
   
 
 
 
 
 
  
Template Sequence  CNVWGDPP. PEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKY
Template Known Secondary structure 
SS
.
SSS


SSTTTBS

GGG
TT
Template Predicted Secondary structure 




.
















Template SS confidence 



























































   1594.....1600. ........1610.........1620.........1630.........1640.........1650..
 
   190.........200....
Predicted Secondary structure 



Query SS confidence 














Query Sequence  SREISELKKFPLVVS
Query Conservation 
   
    
 
   
Alig confidence 





.







Template Conservation 
     .  
 
  
Template Sequence  GSETSD. FTVSVFIP
Template Known Secondary structure  .

Template Predicted Secondary structure 
.

Template SS confidence 














   1653..... .1660......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D