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Job DescriptionA1YIY0
Confidence99.82%DateTue Jul 30 13:19:15 BST 2013
Rank181Aligned Residues169
% Identity12%Templatec3dggC_
PDB info PDB header:immune systemChain: C: PDB Molecule:fabox108 light chain fragment; PDBTitle: crystal structure of fabox108
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.. .
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Query Sequence  EFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNH. . . . . . . . . . . . . . . . . . . . . . . V
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Template Sequence  SLAVSLGQRATISCRASKSVSTS. GYSYMHWYQQKPGQPPKLLIYLASNLESGVPARFSG
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   10.........20.........30.. .......40.........50.........60........
 
   64.....70.........80.........90.........100.........110.........120...
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Query Sequence  IQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEAT
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Template Sequence  SGSGTDFTLNIHPVEEEDAATYYCQHSRELLTFGAGTKLELKRADAA. . . PTVSIFPPSS
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GGG

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   6970.........80.........90.........100.........110..... ....120.....
 
   124.....130.........140.... .....150.........160.... .....170.
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Query Sequence  NLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSGR. . . . . . . . . . . AASLLAS
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Template Sequence  EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT
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TT
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   126...130.........140.........150.........160.........170.........180.....
 
   172.......180.........190.........200..
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Query Sequence  VKAEWSTKNYSCEAKNNISREISELKKFPLV
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Template Sequence  KDEYERHNSYTCEATHKTST. . . SPIVKSFN
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   186...190.........200..... ....210...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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