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Job DescriptionA1YIY0
Confidence99.80%DateTue Jul 30 13:19:15 BST 2013
Rank235Aligned Residues169
% Identity11%Templatec4imlL_
PDB info PDB header:immune systemChain: L: PDB Molecule:crossed light chain (vl-ch1); PDBTitle: crossfab binding to human angiopoietin 2
Resolution2.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.... ...30.........40.........50.........60.
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Query Sequence  NPELT. . . EFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . .
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Template Sequence  QPGLTQPPSVSVAPGQTARITCGGNNIGSKSVH. . . . . WYQQKPGQAPVLVVYDDSDRPS
Template Known Secondary structure 

SBB

S
TTS

TT
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TTS

SBTTB

T
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   1........10.........20.........30... ......40.........50.....
 
   62.......70.........80.........90.........100... ......110...
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Query Sequence  . . . . . . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYL. . DIQFWTPVSH
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Template Conservation                  
 
      
   
 
                            
Template Sequence  GIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHYVFGTGTKVTVLSSASTKG
Template Known Secondary structure  T

TTTTSS

GGG
STTTTB







B
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   56...60.........70.........80.........90.........100.........110.....
 
   114.....120.........130.........140.........150.........160... ..
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Query Sequence  PVLTLQHEATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. . . . . . . . RA
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Template Sequence  PSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL
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SSSBSS

GGGT

SS




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   116...120.........130.........140.........150.........160.........170.....
 
   166...170.........180.........190.....
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Query Sequence  ASLLASVKAEWSTKNYSCEAKNNISREISE
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Template Sequence  SSVVTVPSSSLGTQTYICNVNHKPSNTKVD
Template Known Secondary structure 
S
GGGT
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   176...180.........190.........200.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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