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Job DescriptionA1YIY0
Confidence99.77%DateTue Jul 30 13:19:15 BST 2013
Rank299Aligned Residues172
% Identity16%Templatec2v5tA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:neural cell adhesion molecule 2; PDBTitle: crystal structure of ncam2 ig2-3
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30. ........40.........50.........60....... ..70......
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Query Sequence  ELTEFTNS. . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDR. . . SPHSVFSAE
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Template Sequence  TFREVVSPQEFKQGEDAEVVCRVSSSPAP. . . . . AVSWLYTTISDNRFAMLANNNLQILN
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SSTTS



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B


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   116...120.........130.........140.... .....150.........160.........170
 
   77..80.........90.........100.........110.........120.........130......
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Query Sequence  AKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCE
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Template Sequence  INKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNAT. . AERGEEMTFSCR
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GGG
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   176...180.........190.........200.........210.........220. ........230...
 
   137..140.........150.... .....160.........170.........180.........190....
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Query Sequence  AHQGSLPIFYSFYINGEI. . LGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNISREIS
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Template Sequence  ASGSPE. PAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEK
Template Known Secondary structure  S
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   234..... 240.........250.........260.........270.........280.........290..
 
   195....200....
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Query Sequence  ELKKFPLVVS
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Template Sequence  Q. AFLQVFVQ
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   293 ......300.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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