Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.90%DateTue Jul 30 13:19:15 BST 2013
Rank40Aligned Residues162
% Identity12%Templatec1mq8C_
PDB info PDB header:immune systemChain: C: PDB Molecule:intercellular adhesion molecule-1; PDBTitle: crystal structure of alphal i domain in complex with icam-1
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHSVFSAEAKEENSGLYQCMV
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Template Sequence  LPRGGSVLVTCSTSCDQPKLLGI. . . ETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYS
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Query Sequence  DTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPI. . FYS
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Template Sequence  NCPDGQSTAKTFLTVYWTP. . . . . ERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVV
Template Known Secondary structure 
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BSTTT
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   68.70.........80...... ...90.........100.........110.........120..
 
   148.150.........160... ......170.........180.........190 .........
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Query Sequence  FYINGEILGKPLAPSG. RAASLLASVKAEWSTKNYSCEAKNNIS. . . . . . . REISELKKF
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Template Sequence  LLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQL
Template Known Secondary structure  SSSS

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   123......130.........140.........150.........160.........170.........180..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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