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Job DescriptionA1YIY0
Confidence99.88%DateTue Jul 30 13:19:15 BST 2013
Rank56Aligned Residues167
% Identity14%Templatec4hjjL_
PDB info PDB header:immune systemChain: L: PDB Molecule:anti-il12 anti-il18 dfab light chain; PDBTitle: structure reveals function of the dual variable domain immunoglobulin2 (dvd-ig) molecule
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24..... 30.........40.........50.........60.
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Query Sequence  ELTEFT. . . . NSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . .
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Template Sequence  VMTQSPDSLAVSLGERATINCKASQSVSN. . . . . DVAWYQQKPGQPPKLLIYYASNRYTG
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   3......10.........20.........30. ........40.........50.......
 
   62.......70.........80.........90.........100........
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Query Sequence  . . . . . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFW. . . . . . . .
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Template Sequence  VPDRFSGSGSGTDFTLTISSLEAEDVAVYYCQQDYNSPWTFGGGTKVEIKRTVAAPEIVM
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TTTTSS

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   58.60.........70.........80.........90.........100.........110.......
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TQSPATLSVSPGERATLSCRASESISSNLAWYQQKPGQAPRLFIYTASTRATDIPARFSG
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   118.120.........130.........140.........150.........160.........170.......
 
   109110.........120....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TPVSHPVLTLQHEATN
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Template Sequence  SGSGTEFTLTISSLQSEDFAVYYCQQYNNWPSITFGQGTRLEIKRTVAAPSVFIFPPSDE
Template Known Secondary structure  TT
S

GGG
STT






B




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   178.180.........190.........200.........210.........220.........230.......
 
   125....130......... 140.........150.........160.... .....170..
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Query Sequence  LAVGDKVEFLCEAHQ. GSLPIFYSFYINGEILGKPLAPSGR. . . . . . . . . . . AASLLASV
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Template Conservation                   
    
 
   
                        
 
 
  
Template Sequence  QLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSK
Template Known Secondary structure  TTTBSS
TT

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TTT

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   238.240.........250.........260.........270.........280.........290.......
 
   173......180.........190.....
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Query Sequence  KAEWSTKNYSCEAKNNISREISE
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Template Sequence  ADYEKHKVYACEVTHQGLSSPVT
Template Known Secondary structure  T

TT
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   298.300.........310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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