Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.77%DateTue Jul 30 13:19:15 BST 2013
Rank293Aligned Residues175
% Identity14%Templatec2w59B_
PDB info PDB header:immune systemChain: B: PDB Molecule:igy fcu3-4; PDBTitle: structure of an avian igy-fc 3-4 fragment
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30. ........40.........50.........60.........70.
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Query Sequence  PNPELTEFTNS. . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . . .
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Template Sequence  PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSL. . SVTWTREKSGNLRPDPMVLQEHF
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TT


S

TT
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T
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   349350.........360.........370.........380... ......390.........400......
 
   72.......80.........90.........100.........110.........120..
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Query Sequence  . . . . . . . . . VFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEA
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Template Sequence  NGTYSASSAVPVSTQDWLSGERFTCTVQHEELPLPLSKSVYRNTGPTT. . PPLIYPFAPH
Template Known Secondary structure  TS


TT


TT
SS

S

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   407..410.........420.........430.........440.........450.... .....460....
 
   123......130......... 140.........150.........160......
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Query Sequence  TNLAVGDKVEFLCEAHQ. GSLPIFYSFYINGEILGKPLAPSGRAA. . . . . . . . . . . . . . .
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Template Sequence  PEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANDGDTFFVY
Template Known Secondary structure  GGGTTSSBSS

TT

GGG





TT





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   465....470.........480.........490.........500.........510.........520....
 
   167..170.........180.........190.........
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Query Sequence  . SLLASVKAEWSTKNYSCEAKNNISREISELKKF
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Template Sequence  SKMSVETAKWNGGTVFACMAVHEALPMRFSQRTL
Template Known Secondary structure  TT


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   529530.........540.........550.........560..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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