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Job DescriptionA1YIY0
Confidence99.85%DateTue Jul 30 13:19:15 BST 2013
Rank99Aligned Residues164
% Identity22%Templatec4iiqC_
PDB info PDB header:immune systemChain: C: PDB Molecule:beta-2-microglobulin, mhc class i-related protein; PDBTitle: crystal structure of a human mait tcr in complex with bovine mr1
Resolution2.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22....... 30.........40.........50.........60.... ....
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Query Sequence  NPELTEFT. . . NSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVI. . . . . . . . . . QDRS
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Template Sequence  PPKIQVYSRHPPEDGKPNYLNCYVYGFHPPQIE. . . IDLLKNGEKIKSEQSDLSFSKDWS
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SSS
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   4.....10.........20.........30...... ...40.........50.........60
 
   6970.........80.........90.........100........
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Query Sequence  PHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFW. . . . . . . . . . . . . . . . . . . .
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Template Sequence  FYLLSHAEFTPNSKDQYSCRVKHVTLEQPRIVKWDRRTHSLRYFRLGISEPGYGIPEFIS
Template Known Secondary structure  S
B


S

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   61........70.........80.........90.........100.........110.........120
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AGYVDSHPITMYNSVSQLEPRALWMEENLAPDHWERYTQLLRGWQQAFKVELKQLQHHYN
Template Known Secondary structure  TTSSS


BSSTTS
TT
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   138.140.........150.........160.........170.........180.........190.......
 
  
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Template Sequence  HSGFHTYQRMIGCELLEDGSITGFLQYAYDGQDFLIFNKDTLSWMAMDNVADIIRRVWEA
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   199200.........210.........220.........230.........240.........250........
 
   109110.........120.........130.........140.... .
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . TPVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPI. F
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Template Sequence  NRHELQYQKNWLEEECIAWLKRFLEYGKDALQRTEPPKVRVNHKTTLYCRAYGFYPPEIS
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TTS

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   259260.........270.........280.........290.........300.........310........
 
   146...150.........160. ........170.........180........
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Query Sequence  YSFYINGEILGKPLAP. . . . . SGRAASLLASVKAEWSTKNYSCEAKNN
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Template Sequence  INWMKNGEEIFQDTDYGGILPSGDGTYQTWVSVELQNGDIYSCHVEHG
Template Known Secondary structure  TT

TT




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   325....330.........340.........350.........360.........370..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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