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Job Description | A1YIY0 | Confidence | 99.46% | Date | Tue Jul 30 13:19:15 BST 2013 |
Rank | 465 | Aligned Residues | 90 |
% Identity | 13% | Template | c2id5D_ |
PDB info |
PDB header:ligand binding protein,membrane protein | Chain: D: PDB Molecule:leucine rich repeat neuronal 6a; |
PDBTitle: crystal structure of the lingo-1 ectodomain
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Resolution | 2.70 Å |
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111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | S | H | P | V | L | T | L | Q | H | E | A | T | N | L | A | V | G | D | K | V | E | F | L | C | E | A | H | Q | G | S | L | P | I | F | Y | S | F | Y | I | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | R | A | R | I | R | D | R | K | A | Q | Q | V | F | V | D | E | G | H | T | V | Q | F | V | C | R | A | D | G | D | P | P | . |
P | A | I | L | W | L | S | P | R | K | H | L | V | S | A | K | S | N | G | R | L | T | V | F | P | D | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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383 | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | |
. | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . |
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167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | L | L | A | S | V | K | A | E | W | S | T | K | N | Y | S | C | E | A | K | N | N | I | S | R | E | I | S | E | L | K | K | F | P | L | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | L | E | V | R | Y | A | Q | V | Q | D | N | G | T | Y | L | C | I | A | A | N | A | G | G | N | D | . |
S | M | P | A | H | L | H | V | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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442 | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | |
. | . | 470 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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