Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.80%DateTue Jul 30 13:19:15 BST 2013
Rank229Aligned Residues176
% Identity12%Templatec1h3xA_
PDB info PDB header:immune systemChain: A: PDB Molecule:ig gamma-1 chain c region; PDBTitle: crystal structure of the human igg1 fc-fragment,glycoform2 (g0f)2
Resolution2.44 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30. ........40.........50.........60.........70.
Predicted Secondary structure 



......













.....
Query SS confidence 








. . . . . .







































. . . . .
Query Sequence  PELTEFTNS. . . . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . . .
Query Conservation 
 
      ......

  


 
     
                         .....
Alig confidence 








......














.























.....
Template Conservation 
     

     
  
  
 
 
 
 
  .   
   
 
 
    
            
Template Sequence  PSVFLFPPKPKDTLMISRTPEVTCVVVDVS. HEDPQVKFNWYVDGVQVHNAKTKPREQQY
Template Known Secondary structure 



TTTTT
TTS




.SS



TTB
TT

S

B


Template Predicted Secondary structure 











.











Template SS confidence 



























































   238.240.........250.........260....... ..270.........280.........290......
 
   72.......80.........90.........100.........110.........120..
Predicted Secondary structure  .........






















Query SS confidence  . . . . . . . . .


















































Query Sequence  . . . . . . . . . VFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEA
Query Conservation  .........
 
  
   
 
 
 
 
 
                               
Alig confidence  .........





























..


















Template Conservation                                         ..                   
Template Sequence  NSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKT. . ISKAKGQPREPQVYTLPPS
Template Known Secondary structure  SSS

TT


TTSSS
..
S
SS

B




Template Predicted Secondary structure 



















..









Template SS confidence 



























































   297..300.........310.........320.........330..... ....340.........350....
 
   123......130.........140.... .....150.........160 .........170..
Predicted Secondary structure 










.





.........

Query SS confidence 





















.















. . . . . . . . .











Query Sequence  TNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLA. . . . . . . . . PSGRAASLLASV
Query Conservation    
  
    
 
         .   
 
 
        .........       
 
  
Alig confidence 





















.















.........











Template Conservation       
    
 
             
                   
      
 
 
  
Template Sequence  REEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDK
Template Known Secondary structure  TTTTTSSBSS

SSSSB

S



TTSS
Template Predicted Secondary structure 


















Template SS confidence 



























































   355....360.........370.........380.........390.........400.........410....
 
   173......180.........190.........200.
Predicted Secondary structure 







Query SS confidence 




























Query Sequence  KAEWSTKNYSCEAKNNISREISELKKFPL
Query Conservation 
   
 
 
 
 
 
  
   
    
 
Alig confidence 




























Template Conservation      
 
 


 
 
 

       

  
Template Sequence  SRWQQGNVFSCSVMHEALHNHYTQKSLSL
Template Known Secondary structure  TT


TTSTTS


Template Predicted Secondary structure 











Template SS confidence 




























   415....420.........430.........440...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D