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Job DescriptionA1YIY0
Confidence99.86%DateTue Jul 30 13:19:15 BST 2013
Rank85Aligned Residues164
% Identity12%Templatec2wngA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type PDBTitle: complete extracellular structure of human signal regulatory2 protein (sirp) alpha
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70 ....
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Query Sequence  TNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPH. . . . . . . . . . . . . . SVFS
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Template Sequence  RATPQHTVSFTCESHGFSPRDIT. . . LKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKV
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B
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   128.130.........140.........150 .........160.........170.........180....
 
   75....80.........90.........100.........110.........120.........130....
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Query Sequence  AEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFL
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Template Sequence  VLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIR. . . VPPTLEVTQQPVRAENQVNVT
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TTGGG

TTS
S

GGGTB
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SSTT

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   185....190.........200.........210.........220 .........230.........240.
 
   135....140... ......150.........160 .........170.........180.........190
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Query Sequence  CEAHQGSLP. IFYSFYINGEILGKPLA. . . PSGRAASLLASVKAEWSTKNYSCEAKNNIS
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Template Sequence  CQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWM. SWLLVDVKLTCQVEHDGQ
Template Known Secondary structure  BSS
TT

S

TTS
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TT
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   242.......250.........260.........270.........280.. .......290.........300
 
   191........
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Query Sequence  REISELKKF
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Template Sequence  PAVSKSHDL
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   308.310......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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