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Job DescriptionA1YIY0
Confidence99.71%DateTue Jul 30 13:19:15 BST 2013
Rank362Aligned Residues168
% Identity13%Templatec2zuqC_
PDB info PDB header:oxidoreductase/immune systemChain: C: PDB Molecule:fab fragment heavy chain; PDBTitle: crystal structure of dsbb-fab complex
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........
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Query Sequence  NSETMDVILKCTIKVDPKNPTLQLFYTFYK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VKPGGSLKLSCAASGFAFSSYD. . . MSWVRQTPEKRLEWVAYISSGGGSTYYPDTVKGRF
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Query Sequence  NNHVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQ
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Template Sequence  TISRDNAKNTLYLQMSSLKSEDTAMYYCARPDAMDYWGQGTSVTVSSKTTA. . . PSVYPL
Template Known Secondary structure  TTTT
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   6970.........80.........90.........100.........110......... 120.....
 
   120.........130.........140.... .....150.........160... ......170..
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Query Sequence  HEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSG. . . . . . RAASLLASV
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Template Sequence  APVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVT
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   131........140.........150.........160.........170.........180.........190
 
   173......180.........190.........200......
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Query Sequence  KAEWSTKNYSCEAKNNISREISELKKFPLVVSGT
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Template Sequence  SSTWPSQSITCNVAHPASS. . . TKVDKKIEPRGP
Template Known Secondary structure  TTTSTTS

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   191........200......... 210.........220.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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