Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.89%DateTue Jul 30 13:19:15 BST 2013
Rank48Aligned Residues177
% Identity15%Templatec2yd3A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase s; PDBTitle: crystal structure of the n-terminal ig1-2 module of human2 receptor protein tyrosine phosphatase sigma
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30. ........40.........50.........60.........70.
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Query Sequence  NPELTEFTNS. . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . . . .
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Template Sequence  PPRFIKEPKDQIGVSGGVASFVCQATGDPKP. . . . . RVTWNKKGKKVNSQRFETIEFDES
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TTS
S

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SSSGGG
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   32.......40.........50.........60.. .......70.........80......
 
   72.......80.........90......... 100.........110.........120.....
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Query Sequence  . . . . . VFSAEAKEENSGLYQCMVDTEDGLIQKK. SGYLDIQFWTPVSHPVLTLQHEATNL
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Template Sequence  AGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVV
Template Known Secondary structure  T
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TTTT
STT
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   87..90.........100.........110.........120.........130.........140......
 
   126...130.........140.........150....... ..160.........170.........180.
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Query Sequence  AVGDKVEFLCEAHQGSLPIFYSFYINGEILGK. . . . PLAPSGRAASLLASVKAEWSTKNY
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Template Sequence  ERTRTATMLCAASGNPD. PEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKY
Template Known Secondary structure  TTS



SS
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TT

GGGTTTS
TTS
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GGG
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   147..150.........160... ......170.........180.........190.........200.....
 
   182.......190.........200....
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Query Sequence  SCEAKNNISREISELKKFPLVVS
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Template Sequence  ECVATNSAGVRYSSPANLYVRVR
Template Known Secondary structure  TT




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   206...210.........220........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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