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Job DescriptionA1YIY0
Confidence99.82%DateTue Jul 30 13:19:15 BST 2013
Rank159Aligned Residues170
% Identity16%Templatec3epfR_
PDB info PDB header:viral proteinChain: R: PDB Molecule:poliovirus receptor; PDBTitle: cryoem structure of poliovirus receptor bound to poliovirus2 type 2
Resolution9.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60...
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Query Sequence  FTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHV. . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVA
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   37..40.........50.........60.........70.........80.........90......
 
   64.....70.........80.........90.........100.........110.........120
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Query Sequence  . . . IQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQH
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Template Sequence  ARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAK. . . . . PQNTAEV
Template Known Secondary structure  S
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   97..100.........110.........120.........130.........140.... .....150.
 
   121........130.........140.........150.........160... ......170...
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Query Sequence  EATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. . . . . . . RAASLLASVK
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Template Sequence  QKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPS
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   152.......160.........170.........180.........190.........200.........210.
 
   174.....180.........190.........200...
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Query Sequence  AEWSTKNYSCEAKNNISREISELKKFPLVV
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Template Sequence  SQVDGKQVTCKVEHESFEKPQL. LTVSLTV
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S
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   212.......220.........230... ......240
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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