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Job DescriptionA1YIY0
Confidence99.90%DateTue Jul 30 13:19:15 BST 2013
Rank38Aligned Residues162
% Identity17%Templatec1j89D_
PDB info PDB header:immune systemChain: D: PDB Molecule:high affinity immunoglobulin epsilon receptor alpha- PDBTitle: human high affinity fc receptor fc(epsilon)ri(alpha), tetragonal2 crystal form 2
Resolution4.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30. ........40.........50.........60.........70.......
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Query Sequence  NPELTEFTNS. . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHSVFSAEA
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Template Sequence  KPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSST. . . . . KWFHNGSLSEETNSSLNIVNA
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   4.....10.........20.........30....... ..40.........50........
 
   78.80.........90.........100.........110.........120.........130.......
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Query Sequence  KEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEA
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Template Sequence  KFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQASAEV. . . . . . . . . VMEGQPLFLRCHG
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GGG




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   5960.........70.........80.........90...... ...100.........
 
   138.140.........150.........160.........170.........180.........190.......
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Query Sequence  HQGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNISREISELK
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Template Sequence  WRNWDVYKVIYYKDGEALKY. . . . WYENHNISITNATVEDSGTYYCTGKVWQLDYESEPL
Template Known Secondary structure  GGG

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   110.........120......... 130.........140.........150.........160.....
 
   198.200.
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Query Sequence  KFPL
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Template Sequence  NITV
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   166...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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