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Job DescriptionA1YIY0
Confidence99.72%DateTue Jul 30 13:19:15 BST 2013
Rank357Aligned Residues165
% Identity10%Templatec2vxvH_
PDB info PDB header:immune systemChain: H: PDB Molecule:human igg abt-325; PDBTitle: crystal structure of human igg abt-325 fab fragment
Resolution1.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........
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Query Sequence  FTNSETMDVILKCTIKVDPKNPTLQLFYTFYK. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EVKKPGESLKISCKGSGYTVTSYW. . . IGWVRQMPGKGLEWMGFIYPGDSETRYSPTFQG
Template Known Secondary structure 
TT

SS
GGGS
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TT


TTTT
TTTTT
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   10.........20.........30... ......40.........50.........60......
 
   60.........70.........80.........90........ .100.........110...
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Query Sequence  . . NNHVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQK. . . . KSGYLDIQFWTPVSH
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Template Conservation 
             
 
  
   
 
 
 
 
                            
Template Sequence  QVTISADKSFNTAFLQWSSLKASDTAMYYCARVGSGWYPYTFDIWGQGTMVTVSSASTKG
Template Known Secondary structure  TSGGGTSS

GGG

SSSSTTS



S


B
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   66...70.........80.........90.........100.........110.........120.....
 
   114.....120.........130.........140.... .....150.........160.....
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Query Sequence  PVLTLQHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSGRA. . . . . . .
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Template Sequence  PSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL
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TT

TTSBSS

GGGTB
TT



TTS
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   119120.........130.........140.........150.........160.........170........
 
   166...170.........180.........190.....
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Query Sequence  ASLLASVKAEWSTKNYSCEAKNNISREISE
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Template Sequence  SSVVTVPSSSLGTQTYICNVNHKPSNTKVD
Template Known Secondary structure  GGGTTT


GGGT
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   179180.........190.........200........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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