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Job DescriptionA1YIY0
Confidence99.82%DateTue Jul 30 13:19:15 BST 2013
Rank153Aligned Residues173
% Identity14%Templatec3c2sA_
PDB info PDB header:immune systemChain: A: PDB Molecule:ighm protein; PDBTitle: structural characterization of a human fc fragment engineered for lack2 of effector functions
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30. ........40.... .....50.........60.........70.
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Query Sequence  NPELTEFTNS. . . . . . ETMDVILKCTIKV. . . . DPKNPTLQLFYTFYKNNHVIQDRSPHS
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Template Sequence  GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEV. . . . . KFNWYVDGVEVHNAKTKP
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   237..240.........250.........260.........270... ......280.........290.
 
   72.......80.........90.........100.........110.......
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Query Sequence  . . . . . . . . . . . . . . VFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLT
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Template Sequence  REEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPASIEKTISKAKGQPR. . EPQVY
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   292.......300.........310.........320.........330.........340.... .....
 
   118.120.........130.........140.... .....150.........160... ....
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Query Sequence  LQHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSG. . . . . . . . . RAAS
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Template Sequence  TLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSK
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   350.........360.........370.........380.........390.........400.........
 
   168.170.........180.........190.........200.
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Query Sequence  LLASVKAEWSTKNYSCEAKNNISREISELKKFPL
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Template Sequence  LTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSL
Template Known Secondary structure  T


TTSGGG

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   410.........420.........430.........440...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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