Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.82%DateTue Jul 30 13:19:15 BST 2013
Rank170Aligned Residues173
% Identity14%Templatec3v95A_
PDB info PDB header:immune systemChain: A: PDB Molecule:ig gamma-1 chain c region; PDBTitle: crystal structure of monoclonal human anti-rhesus d fc and igg12 t125(yb2/0) in the presence of edta
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30. ........40.... .....50.........60.........70.
Predicted Secondary structure 




......


....










Query SS confidence 









. . . . . .












. . . .


























Query Sequence  NPELTEFTNS. . . . . . ETMDVILKCTIKV. . . . DPKNPTLQLFYTFYKNNHVIQDRSPHS
Query Conservation   
 
      ......

  


 
    .... 
                         
Alig confidence 









......












....



.....

















Template Conservation   
 
 
 

        
  


 
 
       
  ..... 
 
              
Template Sequence  GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEV. . . . . KFNWYVDGVEVHNAKTKP
Template Known Secondary structure 





SSS


SSS


.....TT




Template Predicted Secondary structure 

















.....








Template SS confidence 



























































   237..240.........250.........260.........270... ......280.........290.
 
   72.......80.........90.........100.........110.......
Predicted Secondary structure  ..............



















Query SS confidence  . . . . . . . . . . . . . .













































Query Sequence  . . . . . . . . . . . . . . VFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLT
Query Conservation  ..............
 
  
   
 
 
 
 
 
                          
Alig confidence  ..............























..



















Template Conservation                         
              ..        
           
Template Sequence  REEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALP. . APIEKTISKAKGQPREPQVY
Template Known Secondary structure 

TTS


TT


TTSS..S

S
SS

B

Template Predicted Secondary structure 


















..






Template SS confidence 



























































   292.......300.........310.........320......... 330.........340.........
 
   118.120.........130.........140.... .....150.........160.... ...
Predicted Secondary structure 













.







.........
Query SS confidence 


























.



















. . . . . . . . .


Query Sequence  LQHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSGR. . . . . . . . . AAS
Query Conservation         
  
    
 
         .   
 
 
            .........   
Alig confidence 


























.



















.........


Template Conservation            
      
             
   
                      
 
Template Sequence  TLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSK
Template Known Secondary structure 


GGGTTSSBSS

TT






TTS
Template Predicted Secondary structure 
























Template SS confidence 



























































   350.........360.........370.........380.........390.........400.........
 
   168.170.........180.........190.........200.
Predicted Secondary structure 







Query SS confidence 

































Query Sequence  LLASVKAEWSTKNYSCEAKNNISREISELKKFPL
Query Conservation 
 
  
   
 
 
 
 
 
  
   
    
 
Alig confidence 

































Template Conservation 
 
      
 
 


 
 
  
        
  
Template Sequence  LTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSL
Template Known Secondary structure  TT


TTSGGG


Template Predicted Secondary structure 










Template SS confidence 

































   410.........420.........430.........440...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D