Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.75%DateTue Jul 30 13:19:15 BST 2013
Rank317Aligned Residues175
% Identity14%Templatec2qejB_
PDB info PDB header:immune systemChain: B: PDB Molecule:ig alpha-1 c region; PDBTitle: crystal structure of a staphylococcus aureus protein (ssl7) in complex2 with fc of human iga1
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30. ........40.........50.........60.........70.
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Query Sequence  NPELTEFTNS. . . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . . .
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Template Sequence  HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFT. . WTPSSGKSAVQGPPERDLCG
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   243......250.........260.........270.........280 .........290.........300
 
   72.......80.........90.........100.........110.........120....
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Query Sequence  . . . . . . . VFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATN
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Template Sequence  CYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFR. . PEVHLLPPPSEE
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   301........310.........320.........330.........340...... ...350........
 
   125....130.........140.... .....150.........160.... .....
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Query Sequence  LAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSGR. . . . . . . . . . . . . . AASLL
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Template Sequence  LALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILR
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   359360.........370.........380.........390.........400.........410........
 
   170.........180.........190.........200
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Query Sequence  ASVKAEWSTKNYSCEAKNNISREISELKKFP
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Template Sequence  VAAEDWKKGDTFSCMVGHEALPLAFTQKTID
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   419420.........430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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