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Job DescriptionA1YIY0
Confidence99.75%DateTue Jul 30 13:19:15 BST 2013
Rank314Aligned Residues175
% Identity14%Templatec2va4A_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:neural cell adhesion molecule 2; PDBTitle: crystal structure of ncam2 ig34
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60....... ..70....
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Query Sequence  NPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDR. . . . . . . SPHSVFS
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Template Sequence  PQKSFNATAERGEEMTFSCRASGSPEP. . . . . AISWFRNGKLIEENEKYILKGSNTELTV
Template Known Secondary structure  S

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   214.....220.........230.........240 .........250.........260........
 
   75....80.........90.........100.........110.........120.........130....
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Query Sequence  AEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFL
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Template Sequence  RNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEP
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GGG
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   269270.........280.........290.........300.........310.........320........
 
   135....140.........150.........160... ......170.........180.........190.
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Query Sequence  CEAHQGSLPIFYSFYINGEILGKPLAPSG. . . RAASLLASVKAEWSTKNYSCEAKNNISR
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Template Sequence  IPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGG
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TTTT
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B
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   329330.........340.........350.........360.........370.........380........
 
   192.......200..
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Query Sequence  EISELKKFPLV
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Template Sequence  HQKS. MYLDIE
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   389390.. ......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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