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Job DescriptionA1YIY0
Confidence99.83%DateTue Jul 30 13:19:15 BST 2013
Rank148Aligned Residues167
% Identity10%Templatec3do3B_
PDB info PDB header:immune systemChain: B: PDB Molecule:ig gamma-1 chain c region; PDBTitle: human 1gg1 fc fragment, 2.5 angstrom structure
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70 .......
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Query Sequence  ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPH. . . . . . . . . . . . . . SVFSAEA
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Template Sequence  ISRTPEVTCVVVDVS. HEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQ
Template Known Secondary structure  TTS



B

B
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SS





B




B
SSS
B





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   253......260....... ..270.........280.........290.........300.........310.
 
   78.80.........90.........100.........110.........120.........130.......
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Query Sequence  KEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEA
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Template Sequence  DWLNGKEYKCKVSNKALPAPIEKTISKAKGQPR. . EPQVYTLPPSREEMTKNQVSLTCLV
Template Known Secondary structure  TT

B

SSSSS
B





S

B..




GGGTSSS
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   312.......320.........330.........340.... .....350.........360.........
 
   138.140.... .....150.........160...... ...170.........180.......
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Query Sequence  HQGSLPI. FYSFYINGEILGKPLAPSGRAA. . . . . . . . . SLLASVKAEWSTKNYSCEAKN
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Template Sequence  KGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMH
Template Known Secondary structure  BSS

TT






TTS
TS


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   370.........380.........390.........400.........410.........420.........
 
   188.190.........200.
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Query Sequence  NISREISELKKFPL
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Template Conservation    
        
  
Template Sequence  EALHNHYTQKSLSL
Template Known Secondary structure  TTSGGG
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   430.........440...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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