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Job DescriptionA1YIY0
Confidence99.81%DateTue Jul 30 13:19:15 BST 2013
Rank194Aligned Residues170
% Identity12%Templatec1hxmA_
PDB info PDB header:immune systemChain: A: PDB Molecule:gamma-delta t-cell receptor; PDBTitle: crystal structure of a human vgamma9/vdelta2 t cell receptor
Resolution3.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.
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Query Sequence  PELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PEHQTVPVSIGVPATLRCSMKGEAIGNYY. . . INWYRKTQGNTMTFIYREKDIYGPGFKD
Template Known Secondary structure  S
STT


SS
GGGS...SSS
STTT
TTTTT
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   6...10.........20.........30.... .....40.........50.........60..
 
   62.......70.........80.........90.........100.........110.......
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Query Sequence  . . . . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLT
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Template Conservation                
 
  
   
 
 
 
 
                            
Template Sequence  NFQGDIDIAKNLAVLKILAPSERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQ
Template Known Secondary structure  TGGGTSS

GGG




SSS




B



S
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   63......70.........80.........90.........100.........110.........120..
 
   118.120.........130.........140.........150... ......160.........170....
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Query Sequence  LQHEATNLAVGDKVEFLCEAHQGSLPIFYSFYINGE. . . ILGKPLAPSGRAASLLASVKA
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Template Sequence  PHTKPSVFVMKNGTNVACLVKEFYPKDIRINLVSSKKITEFDPAIVISPSGKYNAVKLGK
Template Known Secondary structure 

B

TTS
BSS


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TTSS
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   123......130.........140.........150.........160.........170.........180..
 
   175....180.........190.....
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Query Sequence  EWSTKNYSCEAKNNISREISE
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Template Sequence  YEDSNSVTCSVQHDNKTVHST
Template Known Secondary structure  TTTTT
TTGG
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   183......190.........200...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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