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Job DescriptionA1YIY0
Confidence99.91%DateTue Jul 30 13:19:15 BST 2013
Rank31Aligned Residues164
% Identity12%Templatec1iamA_
PDB info PDB header:viral protein receptorChain: A: PDB Molecule:intercellular adhesion molecule-1; PDBTitle: structure of the two amino-terminal domains of human intercellular2 adhesion molecule-1, icam-1
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.........
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Query Sequence  NSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHSVFSAEAKEENSGLYQCMV
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Template Sequence  LPRGGSVLVTCSTSCDQPKLLGI. . . ETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYS
Template Known Secondary structure  TT
SSS
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   11........20.........30... ......40.........50.........60.......
 
   90.........100.........110.........120.........130.........140.... ...
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Query Sequence  DTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPI. . FYS
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Template Sequence  NCPDGQSTAKTFLTVYWTP. . . . . ERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVV
Template Known Secondary structure 
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GGG
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   68.70.........80...... ...90.........100.........110.........120..
 
   148.150.........160... ......170.........180.........190. ........
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Query Sequence  FYINGEILGKPLAPSG. RAASLLASVKAEWSTKNYSCEAKNNISR. . . . . . . EISELKKF
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Template Sequence  LLRGEKELKREPAVGEPAEVTTTVLVRRDHHGAQFSCRTELDLRPQGLELFENTSAPYQL
Template Known Secondary structure  TT

TTT

SS
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   123......130.........140.........150.........160.........170.........180..
 
   200.
Predicted Secondary structure 
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Query Sequence  PL
Query Conservation   
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Template Sequence  QT
Template Known Secondary structure 
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   183.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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