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Job DescriptionA1YIY0
Confidence99.79%DateTue Jul 30 13:19:15 BST 2013
Rank274Aligned Residues178
% Identity13%Templatec2v17L_
PDB info PDB header:immune systemChain: L: PDB Molecule:monoclonal antibody fab fragment mn423; PDBTitle: structure of the complex of antibody mn423 with a fragment2 of tau protein
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50...... ...60..
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Query Sequence  PNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYT. . . . . . . . . . . . . . . . . . FYKNNH
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Template Sequence  SPSYLAAS. . . PGETITINCRASKSIRKFLAWYREKPGKTNKLLIYSGSTLQSGTPSRFS
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S
...TT

SS

TT

TTS

TTT
TT

TT
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   7..10.... .....20.........30.........40.........50.........60...
 
   63......70.........80.........90.........100.........110.........120..
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Query Sequence  VIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEA
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Template Sequence  GSGSGTDFTLTISRLEPEDFAMYYCQQHNDYPLTFG. AGTKLELKRADAAPTVSIFPPSS
Template Known Secondary structure  TT
S

GGG
S
SSSS

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B




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   64.....70.........80.........90......... 100.........110.........120..
 
   123......130.........140.........150.........160... ......170.
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Query Sequence  TNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. . . . . . . . . . . RAASLLAS
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Template Sequence  EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT
Template Known Secondary structure  T

BSS

TT
TT



TTT



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   123......130.........140.........150.........160.........170.........180..
 
   172.......180.........190.........200.....
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Query Sequence  VKAEWSTKNYSCEAKNNISREISELKKFPLVVSG
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Template Sequence  KDEYERHNSYTCEATHKTSTSP. . . IVKSFNRNE
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TT
SS
...TTT
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   183......190.........200.... .....210...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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