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Job DescriptionA1YIY0
Confidence99.60%DateTue Jul 30 13:19:15 BST 2013
Rank416Aligned Residues163
% Identity10%Templatec1ypzH_
PDB info PDB header:immune systemChain: H: PDB Molecule:t-cell receptor gamma chain; PDBTitle: immune receptor
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.....
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Query Sequence  EFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQ. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  SISRPRDETAQISCKVFIESFRSVT. . . IHWYRQKPNQGLEFLLYVLATPTHIFLDKEYK
Template Known Secondary structure  TT

B

SSTTS

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SSS


SS




SS
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   10.........20.........30.... .....40.........50.........60......
 
   66...70.........80.........90.........100 .........
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Query Sequence  . . . . . . . . DRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKS. . . . . . . . GYLDIQFWT
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Template Sequence  KMEASKNPSASTSILTIYSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDA
Template Known Secondary structure 



SSS
S

GGG
SB
SSSS



B




SS
SS
S
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   67..70.........80.........90.........100.........110.........120......
 
   110.........120.........130.........140.... .....150.........160....
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Query Sequence  PVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSGR. . . .
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Template Sequence  DISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRVYWKEKDGNTILDSQEGDTLKTN
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S
B




SB

S





B
STT

B





SS
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   127..130.........140.........150.........160.........170.........180......
 
   165....170.........180.........190..
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Query Sequence  . . . AASLLASVKAEWSTKNYSCEAKNNISRE
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Template Sequence  DTYMKFSWLTVPERAMGKEHRCIVKHENNKG
Template Known Secondary structure  S




B
TT


S

B




SS
ST
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   187..190.........200.........210.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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