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Job DescriptionA1YIY0
Confidence99.90%DateTue Jul 30 13:19:15 BST 2013
Rank39Aligned Residues182
% Identity11%Templatec2y23A_
PDB info PDB header:structural proteinChain: A: PDB Molecule:myomesin; PDBTitle: crystal structure of the myomesin domains my9-my11
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50......... 60.........70.
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Query Sequence  QFPNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYK. . . . . . . NNHVIQDRSPHS
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Template Conservation                
      
                                      
Template Sequence  TVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIE
Template Known Secondary structure  B


SSS
S


SS
TT
SSSS
TTTT
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   1243......1250.........1260.........1270.........1280.........1290.........1300..
 
   72.......80.........90.........100.........110... ......
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Query Sequence  VFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSH. . . . . . . . . . . . PVLTLQ
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Template Conservation    
        
 
 
   
                                   
    
Template Sequence  MFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVE
Template Known Secondary structure  S


GGG
SSS

TSS
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   1303......1310.........1320.........1330.........1340.........1350.........1360..
 
   120.........130.........140.........150.........160.........170.........
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Query Sequence  HEATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTK
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Template Sequence  YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEK. . HGICTLLITEFSKKDAG
Template Known Secondary structure  TTTS

SS
TT

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S
SGGG
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   1363......1370.........1380.........1390.........1400... ......1410.........1420
 
   180.........190.........200.....
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Query Sequence  NYSCEAKNNISREISELKKFPLVVSG
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Template Sequence  IYEVILKDDRGKDK. . . SRLKLVDEA
Template Known Secondary structure  STT

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S

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   1425....1430........ .1440.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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