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Job DescriptionA1YIY0
Confidence99.45%DateTue Jul 30 13:19:15 BST 2013
Rank470Aligned Residues165
% Identity10%Templatec3l5hA_
PDB info PDB header:immune systemChain: A: PDB Molecule:interleukin-6 receptor subunit beta; PDBTitle: crystal structure of the full ectodomain of human gp130: new insights2 into the molecular assembly of receptor complexes
Resolution3.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20......... 30.........40... ......50.........60.......
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Query Sequence  FPNPELTEFT. . . . NSETMDVILKCTIK. . . . . . VDPKNPTLQLFYTFYKNNHVIQDR. .
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Template Sequence  LLDPCGYISPESPVVQLHSNFTAVCLKEKCMDYFHVNANYIV. . . . . WKTNHFTIPKEQY
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   2.......10.........20.........30.........40... ......50......
 
   68.70.........80.........90.........100.........110.........120...
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Query Sequence  . . . . SPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEAT
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Template Sequence  TIINRTASSVTFTDIASLNIQLTCNLTFGQLQNVYGITIISLPPE. . . . . . . . . . KPKNL
Template Known Secondary structure  B

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   58.60.........70.........80.........90.........100.. .....
 
   124.....130.........140.........150 .........160.........170.......
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Query Sequence  NLAVGDKVEFLCEAHQGSLPIFYSFYI. . . . . . NGEILGKPLAPSGRAASLLASVKAEWS
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Template Sequence  SCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFV
Template Known Secondary structure  TTS


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   111........120.........130.........140.........150.........160.........170
 
   178.180.........190.........
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Query Sequence  TKNYSCEAKNNISREISELKKF
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Template Sequence  NIEVWVEAENALGKVTSDHINF
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   171........180.........190..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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