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Job DescriptionA1YIY0
Confidence99.71%DateTue Jul 30 13:19:15 BST 2013
Rank367Aligned Residues163
% Identity12%Templatec1h0dB_
PDB info PDB header:immune system/hydrolaseChain: B: PDB Molecule:antibody fab fragment, heavy chain; PDBTitle: crystal structure of human angiogenin in complex with fab2 fragment of its monoclonal antibody mab 26-2f
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........
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Query Sequence  NSETMDVILKCTIKVDPKNPTLQLFYTFYK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VKPGGSLKLSCAASGFTFSSYT. . . MSWVRQTPEKRLEWVATISSGGGNTYYPDSVKGRF
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   12.......20.........30... ......40.........50.........60........
 
   60.........70.........80.........90...... ...100.........110.....
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Query Sequence  NNHVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLI. . . . QKKSGYLDIQFWTPVSHPV
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Template Sequence  TISRDIAKNTLYLQMSSLRSEDTALYYCTRLGDYGYAYTMDYWGQGTSVTVSSAKTTPPS
Template Known Secondary structure  TTTT
S

GGG


GGGTT




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   68.70.........80.........90.........100.........110.........120.......
 
   116...120.........130.........140.... .....150.........160... .....
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Query Sequence  LTLQHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSG. . . . . . RAASL
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Template Sequence  VYPLAPGGGGGGGAMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSS
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GGGTB
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   121........130.........140.........150.........160.........170.........180
 
   169170.........180.........190.....
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Query Sequence  LASVKAEWSTKNYSCEAKNNISREISE
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Template Sequence  VTVPSSPWPSETVTCNVAHPASSTKVD
Template Known Secondary structure  SSSTTTS

GGGT
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   181........190.........200.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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