Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.85%DateTue Jul 30 13:19:15 BST 2013
Rank96Aligned Residues163
% Identity10%Templatec1hezD_
PDB info PDB header:antibodyChain: D: PDB Molecule:heavy chain of ig; PDBTitle: antibody-antigen complex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.
Predicted Secondary structure 









............................
Query SS confidence 































. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  NSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation    

  


 
     
               ............................
Alig confidence 





















...






............................
Template Conservation 
  
  
 
 
           ...
 
                                
Template Sequence  VQPGRSLRLSCAASGFTFSGYG. . . MHWVRQAPGKGLEWVALISYDESNKYYADSVKGRF
Template Known Secondary structure 
TTS
SS
GGGS
...
TTS

TTS


TTTTTT
Template Predicted Secondary structure 










...
















Template SS confidence 



























































   12.......20.........30... ......40.........50.........60........
 
   62.......70.........80.........90.........100.........110.........
Predicted Secondary structure  ..

























Query SS confidence  . .

























































Query Sequence  . . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQ
Query Conservation  ..          
 
  
   
 
 
 
 
 
                            
Alig confidence  ..

























































Template Conservation              
 
  
   
 
 
 
                                
Template Sequence  TISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPT
Template Known Secondary structure  GGGT
S

GGG
SSSSTT





SS

B

Template Predicted Secondary structure 
















Template SS confidence 



























































   6970.........80.........90.........100.........110.........120........
 
   120.........130.........140.... .....150.........160 .........170....
Predicted Secondary structure 













.





....



Query SS confidence 
























.















. . . .













Query Sequence  HEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLA. . . . PSGRAASLLASVKA
Query Conservation       
  
    
 
         .   
 
 
        ....       
 
  
 
Alig confidence 
























.















....













Template Conservation                               
                         

 
 
Template Sequence  LFPLVSCENSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVL
Template Known Secondary structure 







BSS


TT

B









SSS
Template Predicted Secondary structure 

























Template SS confidence 



























































   129130.........140.........150.........160.........170.........180........
 
   175....180.........190.....
Predicted Secondary structure 





Query SS confidence 




















Query Sequence  EWSTKNYSCEAKNNISREISE
Query Conservation    
 
 
 
 
 
  
   
 
Alig confidence 




















Template Conservation    
 
 


 
    
     
Template Sequence  LPSNEHVVCKVQHPNGNKEKD
Template Known Secondary structure 





TT

Template Predicted Secondary structure 







Template SS confidence 




















   193......200.........210...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D