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Job DescriptionA1YIY0
Confidence99.69%DateTue Jul 30 13:19:15 BST 2013
Rank383Aligned Residues164
% Identity12%Templatec3pv6A_
PDB info PDB header:immune systemChain: A: PDB Molecule:ig-like domain-containing protein PDBTitle: crystal structure of nkp30 bound to its ligand b7-h6
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.....
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Query Sequence  EFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQ. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAI
Template Known Secondary structure  TT



SS


GGG
SSSS
TTSSTT
B
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   35....40.........50.........60.........70.........80.........90....
 
   66...70.........80.........90.........100.........110.........
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Query Sequence  . . . . . . DRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQ
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Template Sequence  VSPWRLKSGDASLRLPGIQLEEAGEYRCEVVVTPLKAQG. TVQLEVVASPASRLLLEDKY
Template Known Secondary structure 

TTTB

TT

GGG
TT.B




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   95....100.........110.........120.........130... ......140.........150...
 
   120.........130.........140.........150.........160..... ....170.....
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Query Sequence  HEATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSGRA. . . . ASLLASVKAE
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Template Sequence  MCESSGFYPEAINITWEKQTQKF. PHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQE
Template Known Secondary structure  BSS

TT.

SS
TTS


TTSS
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   162.......170.........180.... .....190.........200.........210.........220
 
   176...180.........190..
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Query Sequence  WSTKNYSCEAKNNISRE
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Template Sequence  DPGTVYQCVVRHASLHT
Template Known Secondary structure 
SS

TT
SS
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   221........230.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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