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Job DescriptionA1YIY0
Confidence99.87%DateTue Jul 30 13:19:15 BST 2013
Rank68Aligned Residues166
% Identity13%Templatec3qs9F_
PDB info PDB header:cytokine/signaling proteinChain: F: PDB Molecule:fl cytokine receptor; PDBTitle: crystal structure of a human flt3 ligand-receptor ternary complex
Resolution7.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.
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Query Sequence  AQEQFPNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . .
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Template Sequence  DLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLT. . . . WELENKALEEGNYFEMSTY
Template Known Secondary structure  SSS



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GGG
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   248.250.........260.........270.........280.... .....290.........300...
 
   72.......80.........90.........100.........110.........120
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Query Sequence  . . . . . . . . . . . VFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQH
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Template Sequence  STNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVGFINATNSSEDYE. . . . .
Template Known Secondary structure  TTTSS

GGG
TT




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   304.....310.........320.........330.........340.........350........
 
   121........130.........140.........150.........160.........170.........180
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Query Sequence  EATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKN
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Template Sequence  . . . . IDQYEEFCFSVRFKAYPQ. IRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGE
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TT



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TT
B

B
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   361........370........ .380.........390.........400.........410.....
 
   181........190.....
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Query Sequence  YSCEAKNNISREISE
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Template Sequence  YIFHAENDDAQFTKM
Template Known Secondary structure  TT
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   416...420.........430
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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