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Job DescriptionA1YIY0
Confidence99.78%DateTue Jul 30 13:19:15 BST 2013
Rank283Aligned Residues177
% Identity19%Templatec4f9pD_
PDB info PDB header:immune systemChain: D: PDB Molecule:103.2 anti-btn3a1 antibody fragment; PDBTitle: crystal structure of the human btn3a1 ectodomain in complex with the2 103.2 single chain antibody
Resolution3.52 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.
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Query Sequence  EAQEQFPNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . .
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Template Sequence  QVQLQQSGAEV. . . . VRPGTSVKVSCKASGYAFTSYL. . . IHWIKQRPGQGLEWIGVINP
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   1........10. ........20.........30... ......40.........50...
 
   62.......70.........80.........90.........100....
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Query Sequence  . . . . . . . . . . . . . . . . . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLD
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Template Sequence  RSGDSHYNEKFKDRTTLTADQSSSTAYMQLSSLTSDDSAVYFCARSDYGAYWGQGTLVTV
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   54.....60.........70.........80.........90.........100.........110...
 
   105....110.........120.........130.........140.........150.......
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Query Sequence  IQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGK. . . . . . .
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Template Sequence  SAGS. . . . DIVLTQSPVTLSVTPGDSVSLSCRASQSISNNLHWYRQKSHESPRLLIKYAS
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   114... ..120.........130.........140.........150.........160.........
 
   158.160.........170.........180.........190.........200..
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Query Sequence  . . . . . . . . . . PLAPSGRAASLLASVKAEWSTKNYSCEAKNNISREISELKKFPLV
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Template Sequence  QSIFGIPSRFSGSGSGTEFTLSINSVETEDFGIYFCQQSNSWPHTFGTGTKLELK
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   189190.........200.........210.........220.........230.........240...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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