Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.87%DateTue Jul 30 13:19:15 BST 2013
Rank74Aligned Residues174
% Identity13%Templatec3v6bR_
PDB info PDB header:hormone/signaling proteinChain: R: PDB Molecule:vascular endothelial growth factor receptor 2; PDBTitle: vegfr-2/vegf-e complex structure
Resolution3.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.... .....60.........70.........80
Predicted Secondary structure 










....









Query SS confidence 





























. . . .

























Query Sequence  LTEFTNSETMDVILKCTIKVDPKNPTLQLF. . . . YTFYKNNHVIQDRSPHSVFSAEAKEE
Query Conservation 
      

  


 
     
        ....                 
 
  
   
Alig confidence 

















.










....

























Template Conservation   
 
 
  
    
 
  .  
   
 
                       
 
  
   
Template Sequence  VVYITENKNKTVVIPCLG. SISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMIS
Template Known Secondary structure 
SSTTS



.S
TT

TTT


SSS
B

TTT
GGGTT
Template Predicted Secondary structure 




.


















Template SS confidence 



























































   135....140.........150.. .......160.........170.........180.........190...
 
   81........90.........100.........110.........120.........130.........140
Predicted Secondary structure 

























Query SS confidence 



























































Query Sequence  NSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEAHQG
Query Conservation 
 
 
 
 
 
                                 
  
    
 
     
Alig confidence 














..










































Template Conservation 
 
 
 
 
      ..                                           
Template Sequence  YAGMVFCEAKINDES. . YQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTE
Template Known Secondary structure  T
STT..


B

S
S
TT


Template Predicted Secondary structure 







..
















Template SS confidence 



























































   194.....200........ .210.........220.........230.........240.........250.
 
   141 ........150.........160.........170.........180.........190.........
Predicted Secondary structure 
.


















Query SS confidence 
.

























































Query Sequence  S. LPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNISREISELKKF
Query Conservation   .      
 
 
               
 
  
   
 
 
 
 
 
  
   
    
Alig confidence 
.



















































.




Template Conservation                              
 
      
 
 
 
 
 
  
   . 
  
Template Sequence  LNVGIDFNWEYPHKKLVNRSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKK. NSTFV
Template Known Secondary structure  SSB









SS

GGG

SS
.
Template Predicted Secondary structure 





















.
Template SS confidence 



























































   252.......260.........270.........280.........290.........300..... ....310
 
   200..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  PLV
Query Conservation   
 
Alig confidence 


Template Conservation   
 
Template Sequence  RVH
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   323..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D