Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.74%DateTue Jul 30 13:19:15 BST 2013
Rank330Aligned Residues168
% Identity14%Templatec1i8lA_
PDB info PDB header:immune systemChain: A: PDB Molecule:t lymphocyte activation antigen cd80; PDBTitle: human b7-1/ctla-4 co-stimulatory complex
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.....
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Query Sequence  LTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQ. . . . . . . . . . . . . . . . . . .
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Template Sequence  VIHVTKEVKEVATLSCGHN. VSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIF
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   1........10......... 20.........30.........40.........50.........
 
   66...70.........80.........90.........100.........110.........120....
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Query Sequence  . DRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATN
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Template Sequence  DITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFE. .
Template Known Secondary structure  TTTTTSS

GGG
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   60.........70.........80.........90.........100.........110.......
 
   125....130.........140.........150.........160... ......170... .....
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Query Sequence  LAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. . . RAASLLASVK. . . AEWST
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Template Sequence  IPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTN
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SSSSSS
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B


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   118.120.........130.........140.........150.........160.........170.......
 
   179180.........190.....
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Query Sequence  KNYSCEAKNNISREISE
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Template Sequence  HSFMCLIKYGHLRVNQT
Template Known Secondary structure 
TT

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   178.180.........190....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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