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Job DescriptionA1YIY0
Confidence99.82%DateTue Jul 30 13:19:15 BST 2013
Rank168Aligned Residues169
% Identity15%Templatec3bjlA_
PDB info PDB header:immunoglobulinChain: A: PDB Molecule:loc - lambda 1 type light-chain dimer; PDBTitle: loc, a lambda 1 type light-chain dimer (bence-jones2 protein) crystallized in ammonium sulfate
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.
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Query Sequence  PNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . .
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Template Sequence  QPPSASGT. . . PGQRVTISCSGSSSNIGENS. . . VTWYQHLSGTAPKLLIYEDNSRASGV
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SS...TT


TTTTTTS
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   6...10... ......20.........30... ......40.........50.........
 
   62.......70.........80.........90......... 100.........110......
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Query Sequence  . . . . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKK. SGYLDIQFWTPVSHPVL
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Template Conservation                
 
                                           
Template Sequence  SDRFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVFGTGTKVTVLGQPKANPTV
Template Known Secondary structure 
TT
SST

GGG
STTTTB



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B

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   60.........70.........80.........90.........100.........110.........
 
   117..120.........130.........140.... .....150.........160.... .
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Query Sequence  TLQHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSGR. . . . . . . . . . A
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Template Sequence  TLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAAS
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TTT
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   120.........130.........140.........150.........160.........170.........
 
   166...170.........180.........190.....
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Query Sequence  ASLLASVKAEWSTKNYSCEAKNNISREISE
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Template Sequence  SYLSLTPEQWKSHRSYSCQVTHEGSTVEKT
Template Known Secondary structure 
TT
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B
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   180.........190.........200.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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