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Job DescriptionA1YIY0
Confidence99.71%DateTue Jul 30 13:19:15 BST 2013
Rank365Aligned Residues168
% Identity13%Templatec3mo1B_
PDB info PDB header:immune systemChain: B: PDB Molecule:anti-hiv-1 antibody 13h11 heavy chain; PDBTitle: crystal structure of the non-neutralizing hiv antibody 13h11 fab2 fragment
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60
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Query Sequence  AEAQEQFPNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKN. . . . . . . . . . . . .
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Template Sequence  LQIQLVQSGPEL. . . . KKPGETVKISCKASGYTFTDYS. . . VHWVKQVPGKGLKWMGWIN
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TT

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GGGS
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TT


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   0.........10. ........20.........30... ......40.........50..
 
   61........70.........80.........90.........100...
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Query Sequence  . . . . . . . . . . . . . . . . . NHVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYL
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Template Conservation                
             
 
  
   
 
 
 
 
              
Template Sequence  TETGEPTYADDFKGRFAFSLESSASTAYLEIHNLKNEDTATYFCALGWLHWGLGTTLTVS
Template Known Secondary structure  TTT


GGGSSSGGGT
S

GGG
TTT



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Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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