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Job DescriptionA1YIY0
Confidence99.89%DateTue Jul 30 13:19:15 BST 2013
Rank49Aligned Residues172
% Identity19%Templatec2v9qA_
PDB info PDB header:receptorChain: A: PDB Molecule:roundabout homolog 1; PDBTitle: first and second ig domains from human robo1
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30. ........40.........50.........60.........70.
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Query Sequence  NPELTEFTNS. . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . . . .
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Template Sequence  PPRIVEHPSDLIVSKGEPATLNCKAEGRPTP. . . . . TIEWYKGGERVETDKDDPRSHRML
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TTS


S

.....TT


TTT
TT
S
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   67..70.........80.........90....... ..100.........110.........120.
 
   72.......80.........90.........100.........110.........120.
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Query Sequence  . . . . . . . . . . VFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHE
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Template Sequence  LPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAIL. . . . RDDFRQNPS
Template Known Secondary structure 
TTS
SS


BTTB

S

SS



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S

SB


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   122.......130.........140.........150.........160........ .170.......
 
   122.......130.........140.........150.........160... ......170.........180
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Query Sequence  ATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. RAASLLASVKAEWSTKN
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Template Conservation                                                 
 
  
   
 
 
Template Sequence  DVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGK
Template Known Secondary structure 
TTS

B


S

TT

SSSTTTT
S

GGG
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   178.180.........190.........200.........210.........220.........230.......
 
   181........190.........200..
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Query Sequence  YSCEAKNNISREISELKKFPLV
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Template Sequence  YVCVGTNMVGERESEVAELTVL
Template Known Secondary structure  TT


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   238.240.........250.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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