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Job DescriptionA1YIY0
Confidence99.62%DateTue Jul 30 13:19:15 BST 2013
Rank410Aligned Residues157
% Identity13%Templatec3hc0A_
PDB info PDB header:immune systemChain: A: PDB Molecule:immunoglobulin igg1 fab, light chain; PDBTitle: bha10 igg1 wild-type fab - antibody directed at human ltbr
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.
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Query Sequence  FTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EVKKPGSSVKVSCKASGYTFTTYY. . . LHWVRQAPGQGLEWMGWIYPGNVHAQYNEKFKG
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   10.........20.........30... ......40.........50.........60......
 
   62.......70.........80.........90.........100.........110.......
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Query Sequence  . . . . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLT
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Template Sequence  RVTITADKSTSTAYMELSSLRSEDTAVYYCARSWEGFPYWGQGTTVTVSSASTKGPSVF.
Template Known Secondary structure  TGGGT
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   67..70.........80.........90.........100.........110.........120.....
 
   118.120.........130.........140.... .....150.........160... ......
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Query Sequence  LQHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSG. . . . . . . RAASLL
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Template Sequence  . . . . . . . PLAPGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVV
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GGGTB
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   126...130.........140.........150.........160.........170........
 
   170.........180.........190.....
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Query Sequence  ASVKAEWSTKNYSCEAKNNISREISE
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Template Sequence  TVPSSSLGTQTYICNVNHKPSNTKVD
Template Known Secondary structure  GGGTTT


GGGT
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   186...190.........200.........210.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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