Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.80%DateTue Jul 30 13:19:15 BST 2013
Rank236Aligned Residues159
% Identity14%Templatec2wbjG_
PDB info PDB header:immune systemChain: G: PDB Molecule:ob tcr; PDBTitle: tcr complex
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.
Predicted Secondary structure 










.........................
Query SS confidence 


































. . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  EFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation       

  


 
     
               .........................
Alig confidence 





















......






.........................
Template Conservation 



  
  
 
 
        ......
 
 
                           
Template Sequence  ALSIQEGENATMNCSYKTSINN. . . . . . LQWYRQNSGRGLVHLILIRSNEREKHSGRLRV
Template Known Secondary structure 
SSS

SS
......

SSS





TT



TT
Template Predicted Secondary structure 








......












Template SS confidence 



























































   10.........20.........30. ........40.........50.........60...
 
   62.......70.........80.........90.........100.........110.........120.
Predicted Secondary structure 



























Query SS confidence 



























































Query Sequence  HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHE
Query Conservation            
 
  
   
 
 
 
 
 
                              
Alig confidence 














































.....







Template Conservation            
 
  
   
 
 
 
 
                  
.....        
Template Sequence  TLDTSKKSSSLLITASRAADTASYFCATDTTSGTYKYIFGTGTRLKV. . . . . LPNIQNPD
Template Known Secondary structure  TTTT
S

GGG
TTS
S



.....



SS

Template Predicted Secondary structure 
















.....







Template SS confidence 



























































   64.....70.........80.........90.........100.........110 ........
 
   122.......130.........140.........150..... ....160.........170.........
Predicted Secondary structure 














..







Query SS confidence 

































. .























Query Sequence  ATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEIL. . GKPLAPSGRAASLLASVKAEWSTK
Query Conservation     
  
    
 
            
 
 
   ..            
 
  
   
 
Alig confidence 

































..























Template Conservation                      
   
 
 
                      
 
   
 
Template Sequence  PAVYQLRSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKTVLDMRSMDFKSNSAVAWSNKS
Template Known Secondary structure 






S

TT





SSTTS


TTTT


T
Template Predicted Secondary structure 


























Template SS confidence 



























































   119120.........130.........140.........150.........160.........170........
 
   180.........190......
Predicted Secondary structure 




Query SS confidence 
















Query Sequence  NYSCEAKNNISREISEL
Query Conservation   
 
 
 
  
   
  
Alig confidence 
















Template Conservation   


     
       
Template Sequence  DFACANAFNNSIIPEDT
Template Known Secondary structure  T

STTS

SS

TT
B
Template Predicted Secondary structure 






Template SS confidence 
















   182.......190........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D