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Job DescriptionA1YIY0
Confidence99.68%DateTue Jul 30 13:19:15 BST 2013
Rank391Aligned Residues165
% Identity11%Templatec2hfgH_
PDB info PDB header:immune systemChain: H: PDB Molecule:cb3s fab heavy chain; PDBTitle: crystal structure of hbr3 bound to cb3s-fab
Resolution2.61 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.
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Query Sequence  FTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GLVQPGGSLRLSCAASGFTISSSS. . . IHWVRQAPGKGLEWVAWVLPSVGFTDYADSVKG
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TT

SS
GGGS...
TTS
TTTT
TTTBT
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   10.........20.........30... ......40.........50.........60......
 
   62.......70.........80.........90.........100.........110.......
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Query Sequence  . . . . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLT
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Template Conservation 
             
 
      
 
 
 
 
                            
Template Sequence  RFTISADTSKNTAYLQMNSLRAEDTAVYYCARRVCYNRLGVCAGGMDYWGQGTLVTVSSA
Template Known Secondary structure  TGGGT
S

GGG
TT



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   66...70.........80.........90.........100.........110.........120.....
 
   118.120....... ..130.........140.........150.........160... ....
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Query Sequence  LQHEATNLAV. . . GDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. . . . . . . RAAS
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Template Conservation                                   
                   
     
Template Sequence  STKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSS
Template Known Secondary structure 

B





BSS

GGGTB
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   115....120.........130.........140.........150.........160.........170....
 
   168.170.........180.........190.....
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Query Sequence  LLASVKAEWSTKNYSCEAKNNISREISE
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Template Conservation   
 
     
 
 
 
 
 
      
 
Template Sequence  VVTVPSSSLGTQTYICNVNHKPSNTKVD
Template Known Secondary structure  TTSTTTS

GGGT
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   181........190.........200........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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