Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.93%DateTue Jul 30 13:19:15 BST 2013
Rank18Aligned Residues174
% Identity17%Templatec1g0xA_
PDB info PDB header:immune systemChain: A: PDB Molecule:leucocyte immunoglobulin-like receptor-1; PDBTitle: crystal structure of the ligand binding domain of lir-12 (ilt2)
Resolution2.10 Å
Model Dimensions (Å)X:45.869 Y:66.774 Z:31.421

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20......... 30.........40.........50.........60....... .
Predicted Secondary structure 




...












........
Query SS confidence 









. . .





































. . . . . . . .
Query Sequence  FPNPELTEFT. . . NSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDR. . . . . . . . S
Query Conservation 

 
 
    ...  

  


 
     
                     ........ 
Alig confidence 









...















.........












........
Template Conservation 

 
 
   
   
  
  


 
     .........  
                   
Template Sequence  LPKPTLWAEPGSVITQGSPVTLRCQGTQE. . . . . . . . . YRLYREKKTAPWITRIPQELVK
Template Known Secondary structure 
S

S
STT





.........SSS

TS
T
Template Predicted Secondary structure 















.........







Template SS confidence 



























































   3......10.........20.........30. ........40.........50...
 
   6970.........80.........90.........100.........110.........120........
Predicted Secondary structure 



























Query SS confidence 



























































Query Sequence  PHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVG
Query Conservation     
 
  
   
 
 
 
 
 
                                 
  
Alig confidence 


















































.







Template Conservation     
 
  
   
 
 
 
                                .    
  
Template Sequence  KGQFPIPSITWEHAGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQ. PSPVVNSG
Template Known Secondary structure  TTSS

GGG
TTT






SS


.S
STT
Template Predicted Secondary structure 

























.



Template SS confidence 



























































   57..60.........70.........80.........90.........100....... ..110.....
 
   129130.........140.........150.........160... ......170.........180......
Predicted Secondary structure 














..



Query SS confidence 


































. .






















Query Sequence  DKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. . RAASLLASVKAEWSTKNYSCEAK
Query Conservation      
 
            
 
 
           ..    
 
  
   
 
 
 
 
 
Alig confidence 


































..






















Template Conservation      
 
                                  
 
  
   
 
 
 
 
 
Template Sequence  GNVTLQCDSQVAFDGFILCKEGEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAY
Template Known Secondary structure 


SS

S






GGGTT



TTS

Template Predicted Secondary structure 






























Template SS confidence 



























































   116...120.........130.........140.........150.........160.........170.....
 
   187..190... ......200...
Predicted Secondary structure 




....
Query SS confidence 






. . . .









Query Sequence  NNISREI. . . . SELKKFPLVV
Query Conservation 
  
   ....
    
 
  
Alig confidence 






....









Template Conservation 
       
  
  
 
 
  
Template Sequence  DSNSPYEWSLPSDLLELLVLG
Template Known Secondary structure 
TTSTT







Template Predicted Secondary structure 










Template SS confidence 




















   178.180.........190........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D