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Job DescriptionA1YIY0
Confidence99.94%DateTue Jul 30 13:19:15 BST 2013
Rank13Aligned Residues161
% Identity12%Templatec1e07A_
PDB info PDB header:glycoproteinChain: A: PDB Molecule:carcinoembryonic antigen; PDBTitle: model of human carcinoembryonic antigen by homology2 modelling and curve-fitting to experimental solution3 scattering data
ResolutionUNK
Model Dimensions (Å)X:77.550 Y:48.258 Z:41.506

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ETMDVILKCTIKVDPKNPTLQLFYT. FYKNNHVIQDRSPHSVFSAEAKEENSGLYQCMVD
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Template Sequence  DKDAVAFTCEPEAQNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQ
Template Known Secondary structure  TTS

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   481........490.........500.........510.........520.........530.........540
 
   91........100.........110.........120.........130.........140.........150
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Query Sequence  TEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPIFYSFYI
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Template Sequence  NSVSANRSDPVTLDVLYG. . . . PDTPIISPPDSSYLSGANLNLSCHSASNPS. PQYSWRI
Template Known Secondary structure  TTTT


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   541........550........ .560.........570.........580........ .590.....
 
   151........160.........170.........180.........190.........200.....
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Query Sequence  NGEILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNISREISELKKFPLVVSG
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Template Sequence  NGIPQQH. . . . . . . TQVLFIAKITPNNNGTYACFVSNLATGRNN. SIVKSITVSA
Template Known Secondary structure  TT


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   596...600.. .......610.........620.........630.. .......640..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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