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Job DescriptionA1YIY0
Confidence99.78%DateTue Jul 30 13:19:15 BST 2013
Rank286Aligned Residues165
% Identity10%Templatec2q86A_
PDB info PDB header:immune systemChain: A: PDB Molecule:valpha14 tcr; PDBTitle: structure of the mouse invariant nkt cell receptor valpha14
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22....... 30.........40.........50.... ...
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Query Sequence  NPELTEFT. . . . NSETMDVILKCTIKVDPKNPTLQLF. . . . . . . . . . . . . . . . . . . . YTF
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Template Sequence  KTQVEQSPQSLVVRQGENCVLQCNYSVTPDNHLRWYKQDTGKGLVLLTVLVDQKDKTSNG
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   0.........10.........20.........30.........40.........50.........
 
   58.60.........70.........80.........90.........100.........110.......
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Query Sequence  YKNNHVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLT
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Template Sequence  RYSATLDKDAKHSTLHITATLLDDTATYFCVVGDRGSALFGSGTQLIVIPYIQNPEPAVY
Template Known Secondary structure  TTTTT
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   60.........70.........80.........90.........100.........110.........
 
   118.120.........130.........140.........150.........160.........170.......
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Query Sequence  LQHEATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWS
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Template Sequence  QL. . . . . KDPRSQDSTLCLFTDFDSQINVPKTMESGTFITDKCVLD. MKSKSNGAIAWSN
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TTSTT

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   120. ........130.........140.........150.........160 .........170...
 
   178.180.........190..
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Query Sequence  TKNYSCEAKNNISRE
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Template Sequence  QTSFTCQDIFKETNA
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   177..180.........190.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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