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Job DescriptionA1YIY0
Confidence99.80%DateTue Jul 30 13:19:15 BST 2013
Rank216Aligned Residues169
% Identity14%Templatec1uweV_
PDB info PDB header:antibodyChain: V: PDB Molecule:antibody 14d9; PDBTitle: molecular mechanism of enantioselective proton2 transfer to carbon in catalytic antibody 14d9
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........
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Query Sequence  FTNSETMDVILKCTIKVDPKNPTLQLFYTFYK. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ELVKPGASVKISCAASAYSITDFT. . . IYWVKQSHGDSLEWIGGIDPHNGGGAYNQKFRV
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TT

SSS
GGGS...TTT
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GGGTT
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   10.........20.........30... ......40.........50.........60......
 
   60.........70.........80.........90.........100.........110.......
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Query Sequence  . . NNHVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLT
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Template Sequence  KATLTVDTSSSTAYIHLNSLTSEDSAVYYCAIFYGNFFDYWGQGTTVTVSSASTKGPSVF
Template Known Secondary structure  TGGGT
S

GGG
TTT



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B

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   66...70.........80.........90.........100.........110.........120.....
 
   118.120.........130.........140.... .....150.........160..... ...
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Query Sequence  LQHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSGRA. . . . . . . . ASL
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Template Sequence  PLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVV
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GGGTTBSS

GGGTB
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   123......130.........140.........150.........160.........170.........180..
 
   169170.........180.........190.........200.
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Query Sequence  LASVKAEWSTKNYSCEAKNNISREISELKKFPL
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Template Sequence  TV. PSSSLGTQTYICNVNHKPSNTAVD. KAVEP
Template Known Secondary structure  .TTTTTTS
GGGT.

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   183. .....190.........200........ .210...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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