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Job DescriptionA1YIY0
Confidence99.85%DateTue Jul 30 13:19:15 BST 2013
Rank92Aligned Residues163
% Identity13%Templatec1z7zI_
PDB info PDB header:virus/receptorChain: I: PDB Molecule:intercellular adhesion molecule-1; PDBTitle: cryo-em structure of human coxsackievirus a21 complexed with five2 domain icam-1kilifi
Resolution8.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHSVFSAEAKEENSGLYQCMV
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Template Sequence  LPRGGSVLVTCSTSCDQPMLLGI. . . ETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYS
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Query Sequence  DTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPI. . FYS
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Template Sequence  NCPDGQSTAKTFLTVYWTP. . . . . ERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVV
Template Known Secondary structure  TT
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Query Sequence  FYINGEILGKPLAPSGRA. ASLLASVKAEWSTKNYSCEAKNNISREISELKKFP
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Template Sequence  LLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENT
Template Known Secondary structure  TT

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Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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