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Job DescriptionA1YIY0
Confidence99.88%DateTue Jul 30 13:19:15 BST 2013
Rank57Aligned Residues167
% Identity10%Templatec2rcjD_
PDB info PDB header:immune systemChain: D: PDB Molecule:light chain; PDBTitle: solution structure of human immunoglobulin m
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60......... 70.......
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Query Sequence  ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSP. . . . . . . . . . . . . . HSVFSAEA
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Template Sequence  ISRTPEVTCVVVDVSHEDPQV. KFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQ
Template Known Secondary structure  TTS


TT



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   333......340.........350... ......360.........370.........380.........390.
 
   78.80.........90.........100.........110.........120.........130.......
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Query Sequence  KEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEA
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Template Sequence  NWLDGKEYKCKVSNKALPAPIEKT. . ISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLV
Template Known Secondary structure  TT


TTSSS
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GGGGGSS
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   392.......400.........410..... ....420.........430.........440.........
 
   138.140.... .....150.........160.... .....170.........180.......
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Query Sequence  HQGSLPI. FYSFYINGEILGKPLAPSGR. . . . . . . . . AASLLASVKAEWSTKNYSCEAKN
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Template Sequence  KGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMH
Template Known Secondary structure  SSS
SSSSB
S





TTS
TT
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   450.........460.........470.........480.........490.........500.........
 
   188.190.........200.
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Query Sequence  NISREISELKKFPL
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Template Conservation                
Template Sequence  EALHNHYTQKSLSL
Template Known Secondary structure  SSSTTS
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   510.........520...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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