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Job DescriptionA1YIY0
Confidence99.85%DateTue Jul 30 13:19:15 BST 2013
Rank91Aligned Residues169
% Identity14%Templatec1za6H_
PDB info PDB header:immune systemChain: H: PDB Molecule:igg heavy chain; PDBTitle: the structure of an antitumor ch2-domain-deleted humanized2 antibody
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60........ .70.....
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Query Sequence  FTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRS. . . . . . . . . . . . PHSVFSA
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Template Sequence  SKSTSGGTAALGCLVKDYFPEPVT. . . VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTV
Template Known Secondary structure 
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...GGGTB
TT




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   130.........140.........150... ......160.........170.........180......
 
   76...80.........90.........100.........110.........120.........130.....
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Query Sequence  EAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLC
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Template Sequence  PSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCQPR. . EPQVYTLPPSRDELTKNQVSLTC
Template Known Secondary structure  TTTBTTB
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GGGTTSSS
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   187..190.........200.........210.........220. ........230.........240....
 
   136...140.. .......150.........160...... ...170.........180.....
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Query Sequence  EAHQGSL. PIFYSFYINGEILGKPLAPSGRAA. . . . . . . . . SLLASVKAEWSTKNYSCEA
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Template Sequence  LVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSV
Template Known Secondary structure  SSS



SSSSB






TTS

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   265....270.........280.........290.........300.........310.........320....
 
   186...190.........200.
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Query Sequence  KNNISREISELKKFPL
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Template Conservation   
              
Template Sequence  MHEALHNHYTQKSLSL
Template Known Secondary structure 
TTSTTS

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   325....330.........340
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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