Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.79%DateTue Jul 30 13:19:15 BST 2013
Rank262Aligned Residues172
% Identity13%Templatec2fboJ_
PDB info PDB header:immune systemChain: J: PDB Molecule:variable region-containing chitin-binding PDBTitle: crystal structure of the two tandem v-type regions of vcbp32 (v-region-containing chitin binding protein) to 1.85 a
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40... ......50.........60.....
Predicted Secondary structure 








...





............
Query SS confidence 






















. . .





















. . . . . . . . . . . .
Query Sequence  PNPELTEFTNSETMDVILKCTIK. . . VDPKNPTLQLFYTFYKNNHVIQ. . . . . . . . . . . .
Query Conservation 
 
 
      

  


 
   ...  
                   ............
Alig confidence 







...











...




.....











............
Template Conservation 
   
 
 ... 
  
 
 
        
  ..... 
 
 
                  
Template Sequence  THTEVEVH. . . AGGTVELPCSYQLANDTQPP. . . . . VISWLKGASPDRSTKVFKGNYNWQ
Template Known Secondary structure  S
S
...TTS



S

S

.....TT


Template Predicted Secondary structure 


...











.....









Template SS confidence 



























































   10....... ..20.........30....... ..40.........50.........60.
 
   66...70.........80.........90... ...
Predicted Secondary structure  ..........................












...

Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . .



























. . .


Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . DRSPHSVFSAEAKEENSGLYQCMVDTED. . . GLI
Query Conservation  ..........................      
 
  
   
 
 
 
 
 
  ...   
Alig confidence  ..........................



























...


Template Conservation                                  
    
         
            
Template Sequence  GEGLGFVESDSYKESFGDFLGRASVANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFG
Template Known Secondary structure  BTTB


TTS
GGGTTT
S
TTS


S

GGG

TT

SGGG
Template Predicted Secondary structure 




























Template SS confidence 



























































   62.......70.........80.........90.........100.........110.........120.
 
   97..100.........110.........120.........130.........140.........150......
Predicted Secondary structure 



























Query SS confidence 



























































Query Sequence  QKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILG
Query Conservation                              
  
    
 
            
 
 
    
Alig confidence 













































.












Template Conservation                                 
            
 .             
Template Sequence  LDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCAN. ANVTWYTGPTFFE
Template Known Secondary structure  TTTS

S




S

TT




S
TT.

SS
Template Predicted Secondary structure 



















.



Template SS confidence 



























































   122.......130.........140.........150.........160....... ..170.........180
 
   157.. 160.........170.........180.........190.
Predicted Secondary structure 

.........................








Query SS confidence 


. . . . . . . . . . . . . . . . . . . . . . . . .































Query Sequence  KPL. . . . . . . . . . . . . . . . . . . . . . . . . APSGRAASLLASVKAEWSTKNYSCEAKNNISR
Query Conservation     .........................        
 
  
   
 
 
 
 
 
  
 
Alig confidence 


.........................































Template Conservation                                      
 
  
   
 
 
 
 
 
  
 
Template Sequence  NYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGE
Template Known Secondary structure 
SSS

TTS

TTTTTSTTT
S

GGG
SSSSG
Template Predicted Secondary structure 




















Template SS confidence 



























































   181........190.........200.........210.........220.........230.........240
 
   192.......200..
Predicted Secondary structure 
Query SS confidence 










Query Sequence  EISELKKFPLV
Query Conservation    
    
 
 
Alig confidence 



.





Template Conservation      .  
 
 
Template Sequence  LDAD. RSSTIL
Template Known Secondary structure  GG.
Template Predicted Secondary structure  .
Template SS confidence 










   241... .....250
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D