Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.91%DateTue Jul 30 13:19:15 BST 2013
Rank33Aligned Residues175
% Identity13%Templatec3alpB_
PDB info PDB header:cell adhesionChain: B: PDB Molecule:poliovirus receptor-related protein 1; PDBTitle: cell adhesion protein
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70. ..
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Query Sequence  PNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . . . . . VF
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Template Sequence  TQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYR
Template Known Secondary structure 
SS

SS



BS

SS


TTS
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   153......160.........170.........180.........190.........200.........210..
 
   74.....80.........90.........100.........110.........120.........130...
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Query Sequence  SAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEF
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Template Sequence  LVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEP. . . . . EVTIEGFDGNWYLQRMDVKL
Template Known Secondary structure 


GGGTT
TT

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S

BTT

S
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   213......220.........230.........240....... ..250.........260.......
 
   134.....140.........150.........160.........170.........180.........190...
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Query Sequence  LCEAHQGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNISREI
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Template Sequence  TCKADANPPATEYHWTTLNGSLPKGVEAQ. NRTLFFKGPINYSLAGTYICEATNPIGTRS
Template Known Secondary structure  S


TTBS

TT
.TT
S


GGG

SS
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   268.270.........280.........290...... ...300.........310.........320......
 
   194.....200..
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Query Sequence  SELKKFPLV
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Template Conservation    .  
 
 
Template Sequence  GQ. VEVNIT
Template Known Secondary structure  .

B
Template Predicted Secondary structure  .
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   327. .330....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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