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Job DescriptionA1YIY0
Confidence99.65%DateTue Jul 30 13:19:15 BST 2013
Rank401Aligned Residues162
% Identity9%Templatec3lizH_
PDB info PDB header:hydrolase/immune systemChain: H: PDB Molecule:4c3 monoclonal antibody heavy chain; PDBTitle: crystal structure of bla g 2 complexed with fab 4c3
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.....
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Query Sequence  NSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQ. . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTIS
Template Known Secondary structure 
TT

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GGGS

TTS

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TTTTTT
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   12.......20.........30.........40.........50.........60.........70.
 
   66...70.........80.........90.........100.........110.........120..
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Query Sequence  . . . DRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEA
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Template Sequence  RDNAKNTLFLQMSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSV. . . Y
Template Known Secondary structure  GGGT
S

GGG


BTTTB





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B

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   72.......80.........90.........100.........110.........120....... .
 
   123......130.........140.........150.........160... ......170.....
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Query Sequence  TNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. . . . . . . RAASLLASVKAE
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Template Sequence  PLAPNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTV. PSST
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BSS

GGGTB
TT


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   129130.........140.........150.........160.........170.........180... ....
 
   176...180.........190.....
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Query Sequence  WSTKNYSCEAKNNISREISE
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Template Conservation   
 
 


 
 
        
Template Sequence  WPSETVTCNVAHPASSTKVD
Template Known Secondary structure  TTTS

GGGT
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   194.....200.........210...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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