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Job DescriptionA1YIY0
Confidence99.82%DateTue Jul 30 13:19:15 BST 2013
Rank154Aligned Residues173
% Identity13%Templatec3ls4L_
PDB info PDB header:immune systemChain: L: PDB Molecule:light chain of antibody fab fragment; PDBTitle: crystal structure of anti-tetrahydrocannabinol fab fragment in complex2 with thc
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.
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Query Sequence  PNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . .
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Template Sequence  SPTTMAAS. . . PGEKITITCSASSSISSNYLH. . . . WYQQKPGFSPKLLIYRTSNLASGV
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...TT


GGG....
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TTT
TT
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   7..10.... .....20.........30..... ....40.........50.........
 
   62.......70.........80.........90.........100.........110.......
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Query Sequence  . . . . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLT
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Template Sequence  PARFSGSGSGTSYSLTIGTMEAEDVATYYCQQGSSIPLTFGAGTKLELKRADAAPTVSIF
Template Known Secondary structure 
TTSS

GGG

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B

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   60.........70.........80.........90.........100.........110.........
 
   118.120.........130.........140.... .....150.........160... ..
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Query Sequence  LQHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSG. . . . . . . . . . . RA
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Template Sequence  PPSSE. . QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMS
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..TBSS

TT
TT



TTT

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   120.... .....130.........140.........150.........160.........170.......
 
   166...170.........180.........190.........200.....
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Query Sequence  ASLLASVKAEWSTKNYSCEAKNNISREISELKKFPLVVSG
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Template Sequence  STLTLTKDEYERHNSYTCEATHKTST. . . SPIVKSFNRNE
Template Known Secondary structure  TT


TT
S...S
TT
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   178.180.........190.........200... ......210....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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