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Job DescriptionA1YIY0
Confidence99.92%DateTue Jul 30 13:19:15 BST 2013
Rank30Aligned Residues174
% Identity12%Templatec3f8uB_
PDB info PDB header:immune system/isomeraseChain: B: PDB Molecule:tapasin; PDBTitle: tapasin/erp57 heterodimer
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70
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Query Sequence  FPNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPH. . . . . . . . .
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Template Sequence  PPPFGLEWRRQHLGKGHLLLAATPGLNGQMPA. . . . . AQEGAVAFAAWDDDEPWGPWTGN
Template Known Secondary structure  S


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   179180.........190.........200.........210 .........220.........230...
 
   71........80.........90.........100.........110.........120.........
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Query Sequence  . SVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGD
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Template Sequence  GTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPP. . . . KVSLMPATLARAAPGEA
Template Known Secondary structure  TT

GGG
TTB

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TT

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   234.....240.........250.........260.........270.. .......280.........
 
   130.........140... ......150.........160.... .....170.
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Query Sequence  KVEFLCEAHQGSLP. . IFYSFYINGEILGKPLAPSGR. . . . . . . . . . . . . . . . AASLLAS
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Template Conservation     
 
 
 
  
     
 
   
                      

       
 
 
Template Sequence  PPELLCLVSHFYPSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPP
Template Known Secondary structure 


BSSTT
SSSS
S


S



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   290.........300.........310.........320.........330.........340.........
 
   172....... 180.........190.........200..
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Query Sequence  VKAEWSTK. NYSCEAKNNISREISELKKFPLV
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Template Sequence  PVTTEQHGARYACRIHHPSLPASGRSAEVTLE
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GGGTT

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TT


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   350.........360.........370.........380.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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