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Job DescriptionA1YIY0
Confidence99.83%DateTue Jul 30 13:19:15 BST 2013
Rank141Aligned Residues176
% Identity13%Templatec1nsnL_
PDB info PDB header:complex (immunoglobulin/hydrolase)Chain: L: PDB Molecule:igg fab (igg1, kappa); PDBTitle: the crystal structure of antibody n10-staphylococcal2 nuclease complex at 2.9 angstroms resolution
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.
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Query Sequence  PNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . .
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Template Sequence  SPSSLAVS. . . LGQRATISCRASQSVSTSSFRY. MHWYQQKPGQPPRLLIKYASNLESGV
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S...TTS

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B
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   7..10.... .....20.........30...... ...40.........50.........60..
 
   62.......70.........80.........90.........100.........110.......
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Query Sequence  . . . . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLT
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Template Sequence  PARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWEIPYTFGGGTKLEIKRADAAPTVSIF
Template Known Secondary structure 
TTTT
S

GGG

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B




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   5960.........70.........80.........90.........100.........110........
 
   118.120.........130......... 140.........150.........160......
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Query Sequence  LQHEATNLAVGDKVEFLCEAHQ. GSLPIFYSFYINGEILGKPLAPSGRAA. . . . . . . . . .
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Template Sequence  PPSSE. . QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMS
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..TTSSS
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   119120... ......130.........140.........150.........160.........170......
 
   167..170.........180.........190.........200.....
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Query Sequence  . SLLASVKAEWSTKNYSCEAKNNISREISELKKFPLVVSG
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Template Sequence  STLTLTKDEYERHNSYTCEATHKTST. . . SPIVKSFNRNE
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SS
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   177..180.........190.........200.. .......210...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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