Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.95%DateTue Jul 30 13:19:15 BST 2013
Rank5Aligned Residues180
% Identity9%Templatec1p6fA_
PDB info PDB header:immune systemChain: A: PDB Molecule:natural cytotoxicity triggering receptor 1; PDBTitle: structure of the human natural cytotoxicity receptor nkp46
Resolution2.20 Å
Model Dimensions (Å)X:53.003 Y:62.328 Z:28.731

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30. ........40.........50.........60... ......70....
Predicted Secondary structure 






...







..





Query SS confidence 











. . .































. .










Query Sequence  FPNPELTEFTNS. . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHV. . IQDRSPHSVFS
Query Conservation 

 
 
      ...

  


 
     
                 ..        
 
Alig confidence 











...































..










Template Conservation 



 
   
   
  
  


 
                                 
  
Template Sequence  LPKPFIWAEPHFMVPKEKQVTICCQGNYGAVEYQLHFEGSLFAVDRPKPPERINKVKFYI
Template Known Secondary structure 



S
STT



TT

TT

SS
TT

Template Predicted Secondary structure 





























Template SS confidence 



























































   5....10.........20.........30.........40.........50.........60....
 
   75....80.........90.........100.........110.........120.........130....
Predicted Secondary structure 


























Query SS confidence 



























































Query Sequence  AEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFL
Query Conservation    
   
 
 
 
 
 
                                 
  
    
 
Alig confidence 














































...









Template Conservation          
 
 
 
 
                              ...          
Template Sequence  PDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGP. . . EVISGEKVTF
Template Known Secondary structure 
S

GGG
TT







S


S
S...TT
Template Predicted Secondary structure 















...



Template SS confidence 



























































   65....70.........80.........90.........100.........110. ........120.
 
   135....140.........150.........160.........170.........180.........190 ..
Predicted Secondary structure 




















..

Query SS confidence 























































. .

Query Sequence  CEAHQGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNIS. . RE
Query Conservation 
            
 
 
               
 
  
   
 
 
 
 
 
  
..  
Alig confidence 







.














































..

Template Conservation          .                        
 
  
   
 
 
 
 
 
     
 
Template Sequence  YCRLDTAT. SMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSF
Template Known Secondary structure 
TTS
.S
SSS

SS

GGG
TT

Template Predicted Secondary structure 




.






















Template SS confidence 



























































   122....... 130.........140.........150.........160.........170.........180
 
   193......200...
Predicted Secondary structure 
Query SS confidence 










Query Sequence  ISELKKFPLVV
Query Conservation   
    
 
  
Alig confidence 










Template Conservation   
  
 
 
 
Template Sequence  PSEPVKLLVTG
Template Known Secondary structure 




Template Predicted Secondary structure 




Template SS confidence 










   181........190.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D