Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.92%DateTue Jul 30 13:19:15 BST 2013
Rank29Aligned Residues181
% Identity17%Templatec1o0vA_
PDB info PDB header:immune systemChain: A: PDB Molecule:immunoglobulin heavy chain epsilon-1; PDBTitle: the crystal structure of ige fc reveals an asymmetrically bent2 conformation
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30. ........40.........50.........60.........70.
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Query Sequence  FPNPELTEFTNS. . . . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. .
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Template Sequence  FTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGT. . . IQITWLEDGQVMDVDLSTAST
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   229230.........240.........250.........260.... .....270.........280.....
 
   72.......80.........90.........100........
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Query Sequence  . . . . . . . . . . . . VFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFW. . . . . . . . . . .
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Template Sequence  TQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPS
Template Known Secondary structure  TTTT

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   285....290.........300.........310.........320.........330.........340....
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLP
Template Known Secondary structure  TT





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   345....350.........360.........370.........380.........390.........400....
 
   109110.........120.........130.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TPVSHPVLTLQHEATNLAVGDKVEFLC
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Template Sequence  VGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLAC
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   405....410.........420.........430.........440.........450.........460....
 
   136...140... ......150.........160.... .....170.........180...
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Query Sequence  EAHQGSLP. IFYSFYINGEILGKPLAPSGR. . . . . . . . . . . AASLLASVKAEWSTKNYSC
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Template Sequence  LIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFIC
Template Known Secondary structure  BSS

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   465....470.........480.........490.........500.........510.........520....
 
   184.....190.........200....
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Query Sequence  EAKNNISREISELKKFPLVVS
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Template Sequence  RAVHEAASPS. QTVQRAVSVN
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   525....530.... .....540....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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