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Job DescriptionA1YIY0
Confidence99.76%DateTue Jul 30 13:19:15 BST 2013
Rank310Aligned Residues171
% Identity17%Templatec3jz7A_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:coxsackievirus and adenovirus receptor homolog; PDBTitle: crystal structure of the extracellular domains of coxsackie2 & adenovirus receptor from mouse (mcar)
Resolution2.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.......
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Query Sequence  TEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDR. . . . . . . . . . . . . . . . . .
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Template Sequence  QRIEKAKGETAYLPCKFTLSPEDQG. PLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYP
Template Known Secondary structure  TTS


B



TT

S.

SSSS

STT



G
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   27..30.........40.........50. ........60.........70.........80.....
 
   68.70.........80.........90.........100.........110..
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Query Sequence  . . . . . . . . . . . . . . . SPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVS
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Template Conservation                     
                                        
Template Sequence  DLKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTR
Template Known Secondary structure  GGTTTS
S
GGGTB


S

GGG
TT


BS
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   86...90.........100.........110.........120.........130.........140.....
 
   113......120.........130.........140.........150.........160... ......170
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Query Sequence  HPVLTLQHEATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. . RAASLLA
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Template Sequence  CFVDGS. . . . . . EEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPVISV
Template Known Secondary structure  S
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BTT


SB

SS

STT



GGGGGGTTSS
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   146...150. ........160.........170.........180.........190.........
 
   171........180.........190.........200....
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Query Sequence  SVKAEWSTKNYSCEAKNNISREISELKKFPLVVS
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Template Sequence  KNASSEYSGTYSCTVQNRVGSDQCM. LRLDVVPP
Template Known Secondary structure 
S

GGG

SS
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B

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   200.........210.........220.... .....230..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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