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Job DescriptionA1YIY0
Confidence99.88%DateTue Jul 30 13:19:15 BST 2013
Rank62Aligned Residues151
% Identity17%Templatec2ec8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mast/stem cell growth factor receptor; PDBTitle: crystal structure of the exctracellular domain of the receptor2 tyrosine kinase, kit
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70. .
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Query Sequence  EFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . . . . . . . . . . . . V
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Template Sequence  TVFVNDGENVDLIVEYEAFPKPEHQQ. . . . WIYMNRTFTDKWEDYPKSENESNIRYVSEL
Template Known Secondary structure 
TT

S


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B
SSSB

S

SSS

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   322.......330.........340....... ..350.........360.........370.......
 
   73......80.........90.........100.........110.........120.........130..
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Query Sequence  FSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVE
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Template Sequence  HLTRLKGTEGGTYTFLVSNSDVNAAIAFN. . . . . . . . . . . . VYVNTKPEILTYDRLVNGM
Template Known Secondary structure 
S

GGG

SS
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   378.380.........390.........400...... ...410.........420.....
 
   133......140.........150.........160.........170.........180.........190..
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Query Sequence  FLCEAHQGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNISRE
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Template Sequence  LQCVAAGFPE. PTIDWYFCVLPVDVQTLNSGPPFGKLVVQSSIDSSAFKHCKAYNDVGKT
Template Known Secondary structure  S
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S




SS
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   426...430..... ....440.........450.........460.........470.........480....
 
   193.
Predicted Secondary structure 
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Query Sequence  IS
Query Conservation   
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Template Conservation 
 
Template Sequence  SA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   501.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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