Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.86%DateTue Jul 30 13:19:15 BST 2013
Rank89Aligned Residues158
% Identity17%Templatec2druA_
PDB info PDB header:immune systemChain: A: PDB Molecule:chimera of cd48 antigen and t-cell surface antigen cd2; PDBTitle: crystal structure and binding properties of the cd2 and cd244 (2b4)2 binding protein, cd48
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60 .
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Query Sequence  FPNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKN. . . . . . . . . . . . . . . . . . N
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Template Sequence  FQDQSVPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKD
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   1........10.........20.........30.........40.........50.........60
 
   62.......70.........80.........90.........100.........110.........120.
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Query Sequence  HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHE
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Template Sequence  RVDLDKTNGALRIYNVSKEDRGDYYMRMLHETEDQWKITM. . . . . . . . . . . . EVYEMVSK
Template Known Secondary structure  T
TTT


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GGG
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   61........70.........80.........90.........100 ........
 
   122.......130.........140.........150.........160.........170.........180.
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Query Sequence  ATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKNY
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Template Sequence  PMIYWECSNATLTCEVLEGTD. VELKLYQGKEHLRS. . . . . . . LRQKTMSYQWTNLRAPF
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GGGT
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TT.......SSS
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   109110.........120......... 130.........140... ......150.........160
 
   182.......190.......
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Query Sequence  SCEAKNNISREISELK
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Template Sequence  KCKAVNRVSQESEMEV
Template Known Secondary structure  TT
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   161........170......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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