Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.89%DateTue Jul 30 13:19:15 BST 2013
Rank45Aligned Residues179
% Identity12%Templatec3chnD_
PDB info PDB header:immune systemChain: D: PDB Molecule:ig alpha-1 chain c region; PDBTitle: solution structure of human secretory iga1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70 .........
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Query Sequence  ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPH. . . . . . . . . . . . SVFSAEAKE
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Template Sequence  LGSEANLTCTLTGLRDASGVTFT. . WTPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPW
Template Known Secondary structure  SS





SS


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BTTTB


B

TT
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   261........270.........280... ......290.........300.........310........
 
   80.........90.........100.........110.........120.........130.........
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Query Sequence  ENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEAHQ
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Template Sequence  NHGKTFTCTAAYPESKTPLTATL. . SKSGNTFRPEVHLLPPPSEELALNELVTLTCLARG
Template Known Secondary structure  T



SSSSS

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S







TGGGG

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   319320.........330.........340. ........350.........360.........370......
 
   140... ......150.........160..... ....170.........180....
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Query Sequence  GSLP. IFYSFYINGEILGKPLAPSGRA. . . . . . . . . . . . . . ASLLASVKAEWSTKNYSCE
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Template Sequence  FSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCM
Template Known Secondary structure  SSS

TTTT

S




SSS



TT

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   377..380.........390.........400.........410.........420.........430......
 
   185....190.........200.........210....
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Query Sequence  AKNNISREISELKKFPLVVSGTAWIKSNML
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Template Sequence  VGHEALPLAFTQKTIDRLAGKPTHVNVSVV
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TTSTTS


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   437..440.........450.........460......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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