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Job DescriptionA1YIY0
Confidence99.78%DateTue Jul 30 13:19:15 BST 2013
Rank276Aligned Residues170
% Identity14%Templatec1ktkE_
PDB info PDB header:immune systemChain: E: PDB Molecule:t-cell receptor beta chain; PDBTitle: complex of streptococcal pyrogenic enterotoxin c (spec)2 with a human t cell receptor beta chain (vbeta2.1)
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30. ........40.........50....
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Query Sequence  PELTEFTNS. . . . ETMDVILKCTIKVDPKNPTLQLF. . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AVVSQHPSRVIAKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSAEGSKATYEQG
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ST
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   2.......10.........20.........30.........40.........50.........60.
 
   55....60.........70.........80.........90.........100 ........
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Query Sequence  YTFYKNNHVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKS. . . . . . GYLDIQFW
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Template Sequence  VEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSALAGSGSSTDTQYFGPGTRLTVLEDL
Template Known Secondary structure  TS


STT

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S
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   60.........70.........80.........90.........100.........110.........
 
   109110.........120.........130.........140.... .....150.........160.......
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Query Sequence  TPVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSGRAAS
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Template Sequence  KNFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLK
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SSSTTTT


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   121........130.........140.........150.........160.........170.........180
 
   168.170......... 180.........190..
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Query Sequence  . . . . . . . . . . . . . . . LLASVKAEWSTK. NYSCEAKNNISRE
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Template Conservation            
  
 
 
      
 
  
 
 
       
Template Sequence  EQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE
Template Known Secondary structure  SS
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   181........190.........200.........210.........220.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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