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Job DescriptionA1YIY0
Confidence99.74%DateTue Jul 30 13:19:15 BST 2013
Rank340Aligned Residues152
% Identity16%Templatec2if7C_
PDB info PDB header:immune systemChain: C: PDB Molecule:slam family member 6; PDBTitle: crystal structure of ntb-a
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60...
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Query Sequence  TEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHV. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LMVNGILGESVTLPLEFPAGEKVN. . . . FITWLFNETSLAFIVPHETKSPEIHVTNPKQG
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BSSS







SS


....TT


SSS


S

TT
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   6...10.........20......... 30.........40.........50.........60.
 
   64.....70.........80.........90.........100.........110.........120.
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Query Sequence  . . IQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHE
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Template Sequence  KRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNH. . . . .
Template Known Secondary structure  TT
TT


S

GGG

SS




B





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   62.......70.........80.........90.........100.........110......
 
   122.......130.........140.........150.........160.........170.........180.
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Query Sequence  ATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKNY
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Template Sequence  . . . SNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNL. . . . . . TVSWDPRISSEQDY
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S

S


TTB

TTSSS......

TTTSS
S
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   117..120.........130.........140.........150... ......160.......
 
   182.......190.....
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Query Sequence  SCEAKNNISREISE
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Template Conservation 

 
 
  
  
 
Template Sequence  TCIAENAVSNLSFS
Template Known Secondary structure 

BTTB

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   172.......180.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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