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Job DescriptionA1YIY0
Confidence99.64%DateTue Jul 30 13:19:15 BST 2013
Rank402Aligned Residues166
% Identity10%Templatec2v5yA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase mu; PDBTitle: crystal structure of the receptor protein tyrosine2 phosphatase mu ectodomain
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50...... ...60.........70.......
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Query Sequence  LTEFTNSETMDVILKCTIKVDPKNPTLQLFYT. . . . . . . FYKNNHVIQDRSPHSVFSAEA
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Template Sequence  IQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNT
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   171........180.........190.........200.........210.........220.........230
 
   78.80.........90.........100.........110.........120.........130.......
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Query Sequence  KEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEA
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Template Sequence  TKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLA. . . . . . SVGATYLWIQLNA
Template Known Secondary structure 
TTT
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   231........240.........250.........260.........270. ........280....
 
   138 .140.........150.........160.........170.........180.........190....
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Query Sequence  H. . . QGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNISREIS
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Template Sequence  NSINGDGPIVAREVEYCTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTG
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   285....290.........300.........310.........320.........330.........340....
 
   195.
Predicted Secondary structure 
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Query Sequence  EL
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Template Sequence  SP
Template Known Secondary structure 
B
Template Predicted Secondary structure 

Template SS confidence 

   345.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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