Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.84%DateTue Jul 30 13:19:15 BST 2013
Rank112Aligned Residues169
% Identity14%Templatec3o4oB_
PDB info PDB header:immune systemChain: B: PDB Molecule:interleukin-1 receptor accessory protein; PDBTitle: crystal structure of an interleukin-1 receptor complex
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50... ......60.........
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Query Sequence  FTNSETMDVILKCTIKVDPKNPTLQL. . . . . . FYTFYKNNHVIQDRSP. . . . . . . . . . . .
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Template Sequence  IQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISK
Template Known Secondary structure  TTS
B





SSS



SSS


TT



SSS

B



STTTT
TT

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   15....20.........30.........40.........50.........60.........70....
 
   70.........80.........90.........100........
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Query Sequence  . . HSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFW. . . . . . . . . . . . . . . . . . .
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Template Conservation      
 
      
 
 
 
   
  
         
                       
Template Sequence  EKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYG
Template Known Secondary structure 
SSS

BTT

GGG

SS




TT


S



TT
S
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   75....80.........90.........100.........110.........120.........130....
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  IQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVV
Template Known Secondary structure 

TT
TTSS
TTS

SSSSB
SS
SSTTSS

GGG
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   135....140.........150.........160.........170.........180.........190....
 
   109110.........120.........130.........140
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . TPVSHPVLTLQHEATNLAVGDKVEFLCEAHQG. . .
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Template Sequence  TYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLM
Template Known Secondary structure 
SS


GGG




TT
SSS




SS









T
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   195....200.........210.........220.........230.........240.........250....
 
   141........150.........160.... .....170....... ..180.....
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Query Sequence  SLPIFYSFYINGEILGKPLAPSGR. . . . . . . . . . . . . . AASLLASVKAEWS. TKNYSCEA
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Template Conservation   
 
 
 
   
  
                          
 
  
   
  
 
 
 
Template Sequence  DSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHA
Template Known Secondary structure  T


SSSS
S

SS


TT


S

TTTTTS

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   255....260.........270.........280.........290.........300.........310....
 
   186...190......
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Query Sequence  KNNISREISEL
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Template Conservation   
  
     
Template Sequence  RSAKGEVAKAA
Template Known Secondary structure  SSS

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   315....320.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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