Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.87%DateTue Jul 30 13:19:15 BST 2013
Rank70Aligned Residues177
% Identity12%Templatec3do3A_
PDB info PDB header:immune systemChain: A: PDB Molecule:ig gamma-1 chain c region; PDBTitle: human 1gg1 fc fragment, 2.5 angstrom structure
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30. ........40.........50.........60.........70.
Predicted Secondary structure 




......













....
Query SS confidence 









. . . . . .







































. . . .
Query Sequence  NPELTEFTNS. . . . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . .
Query Conservation   
 
      ......

  


 
     
                         ....
Alig confidence 









......














.























....
Template Conservation   
 
   

        
  
 
 
 
    .   
   
 
                  
Template Sequence  GPSVFLFPPKPKDTLMISRTPEVTCVVVDVS. HEDPEVKFNWYVDGVEVHNAKTKPREEQ
Template Known Secondary structure 





TTS


.TTS

TT






B
Template Predicted Secondary structure 












.














Template SS confidence 



























































   237..240.........250.........260....... ..270.........280.........290.....
 
   72.......80.........90.........100.........110.........120.
Predicted Secondary structure  ..........





















Query SS confidence  . . . . . . . . . .

















































Query Sequence  . . . . . . . . . . VFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHE
Query Conservation  ..........
 
  
   
 
 
 
 
 
                              
Alig confidence  ..........





























..

















Template Conservation            
 
      
 
 
 
              ..                  
Template Sequence  YNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKT. . ISKAKGQPREPQVYTLPP
Template Known Secondary structure  SSS


TT

TT
SS
..
S
SS

B



Template Predicted Secondary structure 



















..


Template SS confidence 



























































   296...300.........310.........320.........330..... ....340.........350...
 
   122.......130.........140.... .....150.........160.... .....170.
Predicted Secondary structure 











.







.........
Query SS confidence 






















.



















. . . . . . . . .






Query Sequence  ATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSGR. . . . . . . . . AASLLAS
Query Conservation     
  
    
 
         .   
 
 
            .........   
 
 
Alig confidence 






















.



















.........






Template Conservation        
    
 
             
                    
     
 
 
 
Template Sequence  SREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVD
Template Known Secondary structure 
GGGTTSS
BSS

TT






TTS

Template Predicted Secondary structure 






















Template SS confidence 



























































   354.....360.........370.........380.........390.........400.........410...
 
   172.......180.........190.........200.
Predicted Secondary structure 







Query SS confidence 





























Query Sequence  VKAEWSTKNYSCEAKNNISREISELKKFPL
Query Conservation   
   
 
 
 
 
 
  
   
    
 
Alig confidence 





























Template Conservation       
   


 
    
    
   
  
Template Sequence  KSRWQQGNVFSCSVMHEALHNHYTQKSLSL
Template Known Secondary structure  TTT

TTSGGG

Template Predicted Secondary structure 









Template SS confidence 





























   414.....420.........430.........440...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D