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Job DescriptionA1YIY0
Confidence99.86%DateTue Jul 30 13:19:15 BST 2013
Rank79Aligned Residues166
% Identity13%Templatec1igyB_
PDB info PDB header:immunoglobulinChain: B: PDB Molecule:igg1 intact antibody mab61.1.3; PDBTitle: structure of immunoglobulin
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60..... ....70.......
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Query Sequence  ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQ. . . . . . . . . . . . . . DRSPHSVFSAEA
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Template Sequence  ITVTPKVTCVVVDIS. KDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQ
Template Known Secondary structure  TTS





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B
BBSSS

B


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   266...270.........280 .........290.........300.........310.........320....
 
   78.80.........90.........100.........110.........120.........130.......
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Query Sequence  KEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEA
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Template Sequence  DWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPR. . APQVYTIPPPKEQMAKDKVSLTCMI
Template Known Secondary structure  T


B

B

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S

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SSSSSSS
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   331........340.........350.........360... ......370.........380........
 
   138.140.... .....150.........160....... ..170.........180.......
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Query Sequence  HQGSLPI. FYSFYINGEILGKPLAPSGRAAS. . . . . . . . . LLASVKAEWSTKNYSCEAKN
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Template Sequence  TDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLH
Template Known Secondary structure  B
S
TTS

S







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TT

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   393......400.........410.........420.........430.........440.........450..
 
   188.190.........200
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Query Sequence  NISREISELKKFP
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Template Conservation               
Template Sequence  EGLHNHHTEKSLS
Template Known Secondary structure  TTSGGG

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   461........470...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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