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Job DescriptionA1YIY0
Confidence99.76%DateTue Jul 30 13:19:15 BST 2013
Rank303Aligned Residues165
% Identity17%Templatec2xy2A_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:neural cell adhesion molecule 2; PDBTitle: crystal structure of ncam2 ig1-2
Resolution1.82 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70. ......
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Query Sequence  EFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . . . . . . . VFSAEA
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Template Sequence  KVELSVGESKFFTCTAIGEPESIDW. . . . . YNPQGEKIISTQRVVVQKEGVRSRLTIYNA
Template Known Secondary structure  TT



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   2930.........40.........50... ......60.........70.........80...
 
   78.80.........90.........100.........110.........120.........130.......
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Query Sequence  KEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEA
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Template Sequence  NIEDAGIYRCQATDAKGQTQEATVVLEIYQK. . . . . LTFREVVSPQEFKQGEDAEVVCRV
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GGG

TTS


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   84.....90.........100.........110.... .....120.........130........
 
   138.140.........150... ......160.........170.........180.........190....
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Query Sequence  HQGSLPIFYSFYINGE. . . ILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNISREIS
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Template Sequence  SSSPA. PAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEID
Template Known Secondary structure 
SS
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TT
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   139140... ......150.........160.........170.........180.........190.......
 
   195....200...
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Query Sequence  ELKKFPLVV
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Template Sequence  F. RDIIVIV
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   198 .200.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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