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Job DescriptionA1YIY0
Confidence99.84%DateTue Jul 30 13:19:15 BST 2013
Rank114Aligned Residues180
% Identity13%Templatec2vuoB_
PDB info PDB header:immune systemChain: B: PDB Molecule:ig gamma chain c region; PDBTitle: crystal structure of the rabbit igg fc fragment
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30. ........40.........50.........60.........70.
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Query Sequence  EQFPNPELTEFTNS. . . . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS
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Template Sequence  ELLGGPSVFIFPPKPKDTLMISRTPEVTCVVVDVS. QDDPEVQFTWYINNEQVRTARPPL
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TTS




TTS


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TT

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   233......240.........250.........260....... ..270.........280.........290.
 
   72.......80.........90.........100.........110.......
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Query Sequence  . . . . . . . . . . . . . . VFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLT
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Template Sequence  REQQFNSTIRVVSTLPIAHQDWLRGKEFKCKVHNKALPAPIEKTISKARGQPL. . EPKVY
Template Known Secondary structure 
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TT


TT
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   292.......300.........310.........320.........330.........340.... .....
 
   118.120.........130.........140... ......150.........160.... ...
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Query Sequence  LQHEATNLAVGDKVEFLCEAHQGSLP. IFYSFYINGEILGKPLAPSGR. . . . . . . . . AAS
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Template Sequence  TMGPPREELSSRSVSLTCMINGFYPSDISVEWEKNGKAEDNYKTTPAVLDSDGSYFLYSK
Template Known Secondary structure 


GGGGGSSBSS

TT
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   350.........360.........370.........380.........390.........400.........
 
   168.170.........180.........190.........200
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Query Sequence  LLASVKAEWSTKNYSCEAKNNISREISELKKFP
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Template Sequence  LSVPTSEWQRGDVFTCSVMHEALHNHYTQKSIS
Template Known Secondary structure  TT


TTSGGG
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   410.........420.........430.........440..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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