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Job DescriptionA1YIY0
Confidence99.68%DateTue Jul 30 13:19:15 BST 2013
Rank389Aligned Residues163
% Identity14%Templatec2g60H_
PDB info PDB header:immune systemChain: H: PDB Molecule:anti-flag m2 fab heavy chain; PDBTitle: structure of anti-flag m2 fab domain
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.
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Query Sequence  EFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GELAKPGASVKMSCKSSGYTFTAYA. . . IHWAKQAAGAGLEWIGYIAPAAGAAAYNAAFK
Template Known Secondary structure 
TT

SS
GGGS...
TTS

TTT


TTTT
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   910.........20.........30... ......40.........50.........60.....
 
   62.......70.........80.........90.........100.........110......
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Query Sequence  . . . . . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVL
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Template Conservation   
             
 
  
   
 
 
 
 
                           
Template Sequence  GKATLAADKSSSTAYMAAAALTSEDSAVYYCARAAAAGADYWGQGTTLTVSSAKTTPPSV
Template Known Secondary structure  TTGGGT
S

GGG
SSSS



SS

B

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   65....70.........80.........90.........100.........110.........120....
 
   117..120.........130.........140.........150.........160.. .......
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Query Sequence  TLQHEATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPS. . . . . . . GRAASLL
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Template Sequence  YP. . . . . . LAPSMVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVT
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BSS

GGGTB
TT


TT
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   122. ......130.........140.........150.........160.........170.....
 
   170.........180.........190.........
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Query Sequence  ASVKAEWSTKNYSCEAKNNISREISELKKF
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Template Sequence  V. TSSPRPSETVTCNVAHPASSTKVDKKIV
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TTTTTTS

GGGT

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   193 ......200.........210.........220.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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