Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.74%DateTue Jul 30 13:19:15 BST 2013
Rank331Aligned Residues169
% Identity15%Templatec4k3eI_
PDB info PDB header:immune systemChain: I: PDB Molecule:bovine antibody with ultralong cdr h3, heavy chain; PDBTitle: crystal structure of bovine antibody blv5b8 with ultralong cdr h3
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.
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Query Sequence  NSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VQPSQTLSLTCTASGFSLSDKA. . . VGWVRQAPGKALEWLGSIDTGGSTGYNPGLKSRLS
Template Known Secondary structure 
TTS
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TTTS...
TTS

TT


TTTGGG
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   12.......20.........30... ......40.........50.........60........
 
   62.......70.........80.........90.........100......
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Query Sequence  . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQ. . . . . . . . . . . . . .
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Template Sequence  ITKDNSKSQVSLSVSSVTTEDSATYYCTTVHQETRKTCSDGYIAVDSCGRGQSDGCVNDC
Template Known Secondary structure  TTTT
S

GGG


TT
GGGGSSS
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   6970.........80.........90.........100.........110.........120........
 
   107..110.........120.........130......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FWTPVSHPVLTLQHEATNLAVGDKVEFLCE
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Template Sequence  NSCYYGWRNCRRQPAIHSYEFHVDAWGRGLLVTVSSASTTAPKVYPLSSCCSSTVTLGCL
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B






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Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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