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Job DescriptionA1YIY0
Confidence99.80%DateTue Jul 30 13:19:15 BST 2013
Rank234Aligned Residues159
% Identity16%Templatec3o4oC_
PDB info PDB header:immune systemChain: C: PDB Molecule:interleukin-1 receptor type 2; PDBTitle: crystal structure of an interleukin-1 receptor complex
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40... ......50.........60.........70 .....
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Query Sequence  ETMDVILKCTIK. . . . . . . VDPKNPTLQLFYTFYKNNHVIQDRSPH. . . . . . . . . SVFSA
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Template Sequence  EGEPVALRCPQVPYWLWASVSPRI. . . . . NLTWHKNDSARTVPGEEETRMWAQDGALWLL
Template Known Secondary structure  TTB


TTS
SS

STTSS

.....B


SS

S

S

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TTS
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   2930.........40.........50.. .......60.........70.........80...
 
   76...80.........90.........100........
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Query Sequence  EAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFW. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLS
Template Known Secondary structure  SB
TT



TT
S
GGG
TTS


S
T
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   84.....90.........100.........110.........120.........130.........140...
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                     
                        
Template Sequence  EFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQ
Template Known Secondary structure  TT

SSS


B

SS
B

TT
SS
TTSSSS

GGG


BTTB
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   144.....150.........160.........170.........180.........190.........200...
 
   109110.........120.........130....... ..140.........150
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Query Sequence  . . . . . . . . . . . . . . . TPVSHPVLTLQHEATNLAVGDKVEFLCEA. . . HQGSLPIFYSFYI
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Template Conservation             
                      
      
                  
Template Sequence  QYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTA
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S







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   204.....210.........220.........230.........240.........250.........260...
 
   151........160..... ....170......... 180.........190...
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Query Sequence  NGEILGKPLAPSGRA. . . . . . . . . . . . . . . . ASLLASVKAEWSTK. NYSCEAKNNISREI
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Template Conservation   
  
                            
 
  
   
 
  
 
 
 
  
  
Template Sequence  NDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQT
Template Known Secondary structure  SSS
SSSSS
SSS






SSS



SS


S




TT
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   264.....270.........280.........290.........300.........310.........320...
 
   194.
Predicted Secondary structure 
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Query Sequence  SE
Query Conservation 
 
Alig confidence 

Template Conservation    
Template Sequence  LR
Template Known Secondary structure 
B
Template Predicted Secondary structure 
Template SS confidence 

   324.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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