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Job DescriptionA1YIY0
Confidence99.84%DateTue Jul 30 13:19:15 BST 2013
Rank117Aligned Residues152
% Identity14%Templatec1hnfA_
PDB info PDB header:t lymphocyte adhesion glycoproteinChain: A: PDB Molecule:cd2; PDBTitle: crystal structure of the extracellular region of the human cell2 adhesion molecule cd2 at 2.5 angstroms resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60... ......70...
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Query Sequence  ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHV. . . . . . . . . . . . . . . . . . IQDRSPHSVF
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Template Sequence  LGQDINLDI. . . PSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLK
Template Known Secondary structure  TTS


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SSGGG


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   13......20. ........30.........40.........50.........60.........
 
   74.....80.........90.........100.........110.........120.........130...
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Query Sequence  SAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEF
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Template Sequence  IKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKI. . . . . . . . . SWTCINTTL
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   70.........80.........90.........100.........110. ........120
 
   134.....140.........150.........160.........170.........180.........190...
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Query Sequence  LCEAHQGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNISREI
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Template Sequence  TCEVMNGTD. PELNLYQDGKHLKL. . . . . . . SQRVITHKWTTSLSAKFKCTAGNKVSKES
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   121........ 130.........140... ......150.........160.........170..
 
   194.....200......
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Query Sequence  SELKKFPLVVSGT
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Template Sequence  S. . . VEPVSCPEK
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   173 ......180..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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