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Job DescriptionA1YIY0
Confidence99.84%DateTue Jul 30 13:19:15 BST 2013
Rank120Aligned Residues166
% Identity12%Templatec3b5hB_
PDB info PDB header:cell invasionChain: B: PDB Molecule:cervical emmprin; PDBTitle: crystal structure of the extracellular portion of hab18g/cd147
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60....... ..70.........80.
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Query Sequence  ELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDR. . SPHSVFSAEAKEEN
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Template Sequence  TVFTTVEDLGSKILLTCSLNDSATEVTG. . . HRWLKGGVVLKEDALPGQKTEFKVDSDDQ
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   25....30.........40.........50.. .......60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.
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Query Sequence  SGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEAHQGS
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Template Sequence  WGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEH. . . . . . . . . INEGETAMLVCKSESVP
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   82.......90.........100.........110..... ....120.........130..
 
   142.......150....... ..160.........170.... .....180.........190
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Query Sequence  LPIFYSFYINGEILGK. . . . . . . . . . PLAPSGRAASLLASVKA. EWSTKNYSCEAKNNIS
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Template Sequence  PVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKG
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TTGGGTTT
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   133......140.........150.........160.........170.........180.........190..
 
   191........200..
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Query Sequence  REISELKKFPLV
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Template Sequence  SDQAI. ITLRVR
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   193.... ..200...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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