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Job DescriptionA1YIY0
Confidence99.74%DateTue Jul 30 13:19:15 BST 2013
Rank329Aligned Residues175
% Identity19%Templatec1dzbB_
PDB info PDB header:immune systemChain: B: PDB Molecule:scfv fragment 1f9; PDBTitle: crystal structure of phage library-derived single-chain fv2 fragment 1f9 in complex with turkey egg-white lysozyme
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........
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Query Sequence  EAQEQFPNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYK. . . . . . . . . . . . . . .
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Template Sequence  QVKLQQSGAEL. . . . VKPGASVKLSCTASGFNIKDTY. . . MHWVKQRPEQGLEWIGRIDP
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Query Sequence  . . . . . . . . . . . . . . . NNHVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLD
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Template Sequence  ANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARWDWYFDVWGQGTTVT
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Query Sequence  IQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPIFYSFYI. . . . . . . . . . . . . .
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Template Sequence  VSSD. . . . . IELTQSPSSMYTSLGERVTITCKASQDINSYLRWFQQKPGKSPKTLIYYAT
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   114... ..120.........130.........140.........150.........160........
 
   151........160.........170.........180.........190.........200.
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Query Sequence  . . . NGEILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNISREISELKKFPL
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Template Sequence  SLADGVPSRFSGSGSGQDYSLTISSLESDDTTTYYCLQHGESPYTFGGGTKLEI
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   253......260.........270.........280.........290.........300......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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