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Job DescriptionA1YIY0
Confidence99.84%DateTue Jul 30 13:19:15 BST 2013
Rank115Aligned Residues170
% Identity14%Templatec4acpA_
PDB info PDB header:immune systemChain: A: PDB Molecule:ig gamma-1 chain c region; PDBTitle: deactivation of human igg1 fc by endoglycosidase treatment
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30. ........40.........50.........60.........70.
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Query Sequence  PELTEFTNS. . . . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . . .
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Template Sequence  PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHPEVK. . . FNWYVDGVEVHNAKTKPREEQT
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   238.240.........250.........260.........270.. .......280.........290....
 
   72.......80.........90.........100.........110.........120.....
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Query Sequence  . . . . . . VFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNL
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Template Sequence  YRVVSVLTVLHQDWLNGKEYKCKVSNKPIEKTISKAKGQ. . . . . . PREPQVYTLPPSRDE
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   300.........310.........320.........330........ .340.........350...
 
   126...130.........140... ......150.........160... ......170.....
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Query Sequence  AVGDKVEFLCEAHQGSLP. IFYSFYINGEILGKPLAPSG. . . . . . . . . RAASLLASVKAE
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Template Sequence  LTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRW
Template Known Secondary structure  GGSSBSS

TT
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   358.360.........370.........380.........390.........400.........410.......
 
   176...180.........190.........200.
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Query Sequence  WSTKNYSCEAKNNISREISELKKFPL
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Template Sequence  QQGNVFSCSVMHEALHNHYTQKSLSL
Template Known Secondary structure  TT


TTSGGG


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   418.420.........430.........440...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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