Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.92%DateTue Jul 30 13:19:15 BST 2013
Rank21Aligned Residues161
% Identity16%Templatec1sy6A_
PDB info PDB header:signaling protein/antibioticChain: A: PDB Molecule:t-cell surface glycoprotein cd3 gamma/epsilon PDBTitle: crystal structure of cd3gammaepsilon heterodimer in complex2 with okt3 fab fragment
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.........70. ...
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Query Sequence  QEQFPNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . VFS
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Template Sequence  QSIKGNHLVKVYDYQEDGSVLLTCDAEAKN. . . . . . . . ITWFKDGKMIGFLTEDKKKWNL
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   1........10.........20.........30 .........40.........50..
 
   75....80.........90.........100.........110.........120.........130....
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Query Sequence  AEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFL
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Template Sequence  GSNAKDPRGMYQCKGSQNKSKPL. . . . . . . . . . . . . . . QVYYRMQTPYKVSISGTTVILT
Template Known Secondary structure  GGG

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   53......60.........70..... ....80.........90.......
 
   135....140.........150....... ..160.........170.........180.........190
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Query Sequence  CEAHQGSLPIFYSFYINGEILGK. . . . PLAPSGRAASLLASVKAEWSTKNYSCEAKNNIS
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Template Sequence  C. . . PQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKP
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   134 .....140.........150.........160.........170.........180.........190
 
   191........200...
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Query Sequence  REISELKKFPLVV
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Template Sequence  EDANFYLYLRARV
Template Known Secondary structure  GGSS


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   191........200...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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