Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.69%DateTue Jul 30 13:19:15 BST 2013
Rank384Aligned Residues156
% Identity15%Templatec1nfdA_
PDB info PDB header:complex (immunoreceptor/immunoglobulin)Chain: A: PDB Molecule:n15 alpha-beta t-cell receptor; PDBTitle: an alpha-beta t cell receptor (tcr) heterodimer in complex with an2 anti-tcr fab fragment derived from a mitogenic antibody
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60 ..
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Query Sequence  FTNSETMDVILKCTIKVDPKNPTLQLFYTFYKN. . . . . . . . . . . . . . . . . . . . . . . . . NH
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Template Sequence  VTVTEGLPVKLNCTYQTTYLTIAFF. . . . WYVQYLNEAPQVLLKSSTDNKRTEHQGFHAT
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   10.........20.........30.... .....40.........50.........60.....
 
   63......70.........80.........90.........100.........110.........120..
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Query Sequence  VIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEA
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Template Sequence  LHKSSSSFHLQKSSAQLSDSALYYCALSEGGNYKYVFGAGTRLKVIAHIQNPEPAV. . . Y
Template Known Secondary structure  GGGTSS

GGG
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   66...70.........80.........90.........100.........110.........120. .
 
   123......130.........140.........150.........160... ......170.........180
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Query Sequence  TNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. . RAASLLASVKAEWSTKN
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Template Sequence  QLKDPRSQDSTLCLFTDFDSQINVPKTMESGTFITDKTVLDMKAMDSKSNGAIAWSNQTS
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   127..130.........140.........150.........160.........170.........180......
 
   181........190
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Query Sequence  YSCEAKNNIS
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Template Sequence  FTCQDIFKET
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S
S
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   189190........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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