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Job DescriptionA1YIY0
Confidence99.94%DateTue Jul 30 13:19:15 BST 2013
Rank14Aligned Residues180
% Identity19%Templatec3oq3B_
PDB info PDB header:cytokine/viral proteinChain: B: PDB Molecule:ifn-alpha/beta binding protein c12r; PDBTitle: structural basis of type-i interferon sequestration by a poxvirus2 decoy receptor
Resolution2.10 Å
Model Dimensions (Å)X:77.446 Y:54.480 Z:38.595

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60....... ..70.
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Query Sequence  EQFPNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDR. . . . . . SPHS
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Template Sequence  PPSCIPETYELGTHDKYGIDLYCGILYAKHYNNIT. . . . WYKNNQELIIDGTKYSQSGQN
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   127..130.........140.........150.........160. ........170.........180..
 
   72.......80.........90......... 100.........110.........120........
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Query Sequence  VFSAEAKEENSGLYQCMVDTEDGLIQKK. . . SGYLDIQFWTPVSHPVLTLQHEATNLAVG
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Template Sequence  LIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIG
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S

GGG


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   183......190.........200.........210.........220.........230.........240..
 
   129130.........140.... .....150.........160.... .....170......
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Query Sequence  DKVEFLCEAHQGSLPI. . . FYSFYINGEILGKPLAPSGR. . . . . . . . . AASLLASVKAEW
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Template Sequence  EPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEE
Template Known Secondary structure  S
TT

TT


TTS
B

B
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   243......250.........260.........270.........280.........290.........300..
 
   177.. 180.........190.........200..
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Query Sequence  STK. NYSCEAKNNISREISELKKFPLV
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Template Sequence  YIGNTYTCRGHNYYFDKTLT. TTVVLE
Template Known Secondary structure  GTT

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   303......310.........320.. ......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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