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Job DescriptionA1YIY0
Confidence99.58%DateTue Jul 30 13:19:15 BST 2013
Rank422Aligned Residues166
% Identity19%Templatec2jlkA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:neural cell adhesion molecule 2; PDBTitle: crystal structure of ncam2 igiv-fn3i
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30. ........40.........50.........60.....
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Query Sequence  NPELTEFTNS. . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQ. . . . . . . . . . . .
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Template Sequence  QPHIIQ. LKNETTYENGQVTLVCDAEGEPIP. . . . . EITWKRAVDGFTFTESLDGRIEVK
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TT

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   301..... ...310.........320.........330 .........340.........350....
 
   66...70.........80.........90.........100.........110.........120....
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Query Sequence  . DRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATN
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Template Sequence  GQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYY. . . . . .
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   358.360.........370.........380.........390.........400.........410.
 
   125....130.........140.........150....... ..160.........170........
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Query Sequence  LAVGDKVEFLCEAHQGSLPIFYSFYINGEILGK. . . . . . PLAPSGRAASLLASVKAEWST
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Template Sequence  SWEGNPINISCDVKSNPP. ASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDF
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   412.......420......... 430.........440.........450.........460.........470
 
   179180.........190.........200
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Query Sequence  KNYSCEAKNNISREISELKKFP
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Template Sequence  GRYNCTATNHIGTRFQEYILAL
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   471........480.........490..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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