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Job DescriptionA1YIY0
Confidence99.83%DateTue Jul 30 13:19:15 BST 2013
Rank134Aligned Residues171
% Identity15%Templatec1mcoH_
PDB info PDB header:immunoglobulinChain: H: PDB Molecule:igg1 mcg intact antibody (heavy chain); PDBTitle: three-dimensional structure of a human immunoglobulin with a hinge2 deletion
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30. ........40.........50.........60.
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Query Sequence  PELTEFTNS. . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . .
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Template Sequence  PLVLQESGPGLVKPSEALSLTCTVSGDSIN. TILYYWSWIRQPPGKGLEWIGYIYYSGST
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   1........10.........20.........30 .........40.........50.........
 
   62.......70.........80.........90.........100.........
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Query Sequence  . . . . . . . . . . . . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWT
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Template Sequence  YGNPSLKSRVTISVNTSKNQFYSKLSSVTAADTAVYYCARVPLVVNPWG. QGTLVTVSSA
Template Known Secondary structure 
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SSB
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   60.........70.........80.........90.........100........ .110........
 
   110.........120.........130.........140.........150.........160...
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Query Sequence  PVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. . . . . .
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Template Sequence  STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP. QPVTVSWNSGALTSGVHTFPAVLQSS
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   119120.........130.........140.........150. ........160.........170.......
 
   164.....170.........180.........190......
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Query Sequence  . . . RAASLLASVKAEWSTKNYSCEAKNNISREISEL
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Template Conservation                  
 
 
 
             
Template Sequence  GLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDK
Template Known Secondary structure  S



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   178.180.........190.........200.........210...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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