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Job DescriptionA1YIY0
Confidence99.79%DateTue Jul 30 13:19:15 BST 2013
Rank257Aligned Residues175
% Identity11%Templatec3s7gB_
PDB info PDB header:immune systemChain: B: PDB Molecule:ig gamma-1 chain c region; PDBTitle: aglycosylated human igg1 fc fragment
Resolution3.13 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30. ........40.........50.........60.........70.
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Query Sequence  PELTEFTNS. . . . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . . .
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Template Sequence  PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHED. PEVKFNWYVDGVEVHNAKTKPREEQY
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SSS.


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S
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   238.240.........250.........260.........270 .........280.........290......
 
   72.......80.........90.........100.........110.........120..
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Query Sequence  . . . . . . . . . VFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEA
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Template Sequence  NSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPR. . EPQVYTLPPS
Template Known Secondary structure  SS


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   297..300.........310.........320.........330.........340.... .....350....
 
   123......130.........140.. .......150.........160..... ....170..
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Query Sequence  TNLAVGDKVEFLCEAHQGSL. PIFYSFYINGEILGKPLAPSGRA. . . . . . . . . ASLLASV
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Template Sequence  RDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDK
Template Known Secondary structure  TTGGGSSBSS

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   355....360.........370.........380.........390.........400.........410....
 
   173......180.........190.........200
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Query Sequence  KAEWSTKNYSCEAKNNISREISELKKFP
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Template Sequence  SRWQQGNVFSCSVMHEALHNHYTQKSLS
Template Known Secondary structure  T


TTSGGG
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   415....420.........430.........440..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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