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Job DescriptionA1YIY0
Confidence99.79%DateTue Jul 30 13:19:15 BST 2013
Rank265Aligned Residues167
% Identity11%Templatec2volA_
PDB info PDB header:immune systemChain: A: PDB Molecule:murine igg fc; PDBTitle: murine trim21 in complex with murine igg fc
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70. .....
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Query Sequence  SETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . . . . . . . . . . . . VFSAE
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Template Sequence  TITLTPKVTCVVVDIS. KDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMH
Template Known Secondary structure  STTS


.TT



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TTT

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   252.......260....... ..270.........280.........290.........300.........310
 
   77..80.........90.........100.........110.........120.........130......
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Query Sequence  AKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCE
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Template Sequence  QDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKE. . QMAKDKVSLTCM
Template Known Secondary structure  TT


TT
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B




TG..GGSSS
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   311........320.........330.........340.........350...... ...360........
 
   137..140.... .....150.........160... ......170.........180......
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Query Sequence  AHQGSLPI. FYSFYINGEILGKPLAPSG. . . . . . . . . RAASLLASVKAEWSTKNYSCEAK
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Template Sequence  ITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVL
Template Known Secondary structure  BSS

TT
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   369370.........380.........390.........400.........410.........420........
 
   187..190.........200
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Query Sequence  NNISREISELKKFP
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Template Sequence  HEGLHNHHTEKSLS
Template Known Secondary structure 
TTSGGG
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   429430.........440..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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