Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.78%DateTue Jul 30 13:19:15 BST 2013
Rank275Aligned Residues172
% Identity11%Templatec4depF_
PDB info PDB header:immune systemChain: F: PDB Molecule:interleukin-1 receptor accessory protein; PDBTitle: structure of the il-1b signaling complex
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60....... ..70....
Predicted Secondary structure 

















.....


Query SS confidence 















































. . . . .






Query Sequence  FPNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDR. . . . . SPHSVFS
Query Conservation 

 
 
      

  


 
     
                     .....    
 
Alig confidence 















































.....






Template Conservation                                                           
  
Template Sequence  SPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEGMNLSF
Template Known Secondary structure 
SS


TT
S
SS
TTSS
TT


TT
SS
SSTT
Template Predicted Secondary structure 

























Template SS confidence 



























































   120.........130.........140.........150.........160.........170.........
 
   75....80.........90......... 100.........110.........120.........130...
Predicted Secondary structure 









.
















Query SS confidence 
























.

































Query Sequence  AEAKEENSGLYQCMVDTEDGLIQKK. SGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEF
Query Conservation    
   
 
 
 
 
 
        .                         
  
    
Alig confidence 
























.

































Template Conservation            
 
                
                     
  
    
Template Sequence  LIALISNNGNYTCVVTYPGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYELIPCTV
Template Known Secondary structure  S

GGG






GGG

S
S
SS


Template Predicted Secondary structure 

























Template SS confidence 



























































   180.........190.........200.........210.........220.........230.........
 
   134.....140.........150.........160.........170.........180.........190...
Predicted Secondary structure 






















Query SS confidence 



























































Query Sequence  LCEAHQGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNISREI
Query Conservation   
            
 
 
               
 
  
   
 
 
 
 
 
  
   
Alig confidence 








.




















...

























Template Conservation   
   
 
 .
 
 
 
              ...           
 
 
 
 
  
   
Template Sequence  YFSFLMDSR. NEVWWTIDTINESISHSRTED. . . ETRTQILSDLKRSYVCHARSAKGEVA
Template Known Secondary structure 


SS

.





B
TT

...

TTS
TT
Template Predicted Secondary structure 




.







...




Template SS confidence 



























































   249250....... ..260.........270........ .280.........290.........300....
 
   194.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  SE
Query Conservation 
 
Alig confidence 

Template Conservation    
Template Sequence  KA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   323.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D