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Job DescriptionA1YIY0
Confidence99.92%DateTue Jul 30 13:19:15 BST 2013
Rank27Aligned Residues155
% Identity17%Templatec2gi7B_
PDB info PDB header:blood clotting, cell adhesionChain: B: PDB Molecule:gpvi protein; PDBTitle: crystal structure of human platelet glycoprotein vi (gpvi)
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30. ........40.........50.........60.........70......
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Query Sequence  FPNPELTEFTNS. . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHSVFSAE
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Template Sequence  LPKPSLQALPSSLVPLEKPVTLRCQGPPGVDL. . . . . . YRLEKLSSSRYQDQ. AVLFIPA
Template Known Secondary structure  B


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   5....10.........20.........30...... ...40.........50 .......
 
   77..80.........90.........100.........110.........120.........130......
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Query Sequence  AKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCE
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Template Sequence  MKRSLAGRYRCSYQNGSLWSLPSDQ. . . . . . . . . . . . LELVATGVFAKPSLSAGDVTLQC
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   58.60.........70.........80.. .......90.........100.....
 
   137..140.........150.........160.........170.........180.........190 ..
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Query Sequence  AHQGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNIS. . . . RE
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Template Sequence  QTRYGF. DQFALYKEGERWY. . . . . . . . RASFPIITVTAAHSGTYRCYSFSSRDPYLWSA
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   115....120 .........130... ......140.........150.........160.....
 
   193......200..
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Query Sequence  ISELKKFPLV
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Template Sequence  PSDPLELVVT
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   174.....180...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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