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Job DescriptionA1YIY0
Confidence99.79%DateTue Jul 30 13:19:15 BST 2013
Rank258Aligned Residues162
% Identity15%Templatec1zglR_
PDB info PDB header:immune systemChain: R: PDB Molecule:t cell receptor beta chain; PDBTitle: crystal structure of 3a6 tcr bound to mbp/hla-dr2a
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.
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Query Sequence  FTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LIKTRGQQVTLSCSPISGHRS. . . . . . VSWYQQTPGQGLQFLFEYFNETQRNKGNFPGRF
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TT

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TTT
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   11........20.........30. ........40.........50.........60....
 
   62.......70.........80.........90.........100 .........110....
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Query Sequence  . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKS. . . . . . GYLDIQFWTPVSHP
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Template Sequence  SGRQFSNSRSEMNVSTLELGDSALYLCASSLADRVNTEAFFGQGTRLTVVEDLKNVFPPE
Template Known Secondary structure 
TTS

S

STT
S
S
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SSGGG
B


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   66...70.........80.........90.........100.........110.........120.....
 
   115....120.........130......... 140.........150.........160...
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Query Sequence  VLTLQHEATNLAVGDKVEFLCEAHQ. GSLPIFYSFYINGEILGKPLAPSG. . . . . . . . . .
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Template Sequence  VAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALN
Template Known Secondary structure 


SSBSS


TT

TT
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   128.130.........140.........150.........160.........170.........180.......
 
   164.....170......... 180.........190.....
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Query Sequence  . . . . . RAASLLASVKAEWSTK. NYSCEAKNNISREISE
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Template Sequence  DSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDE
Template Known Secondary structure  T


T
TT





B
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   188.190.........200.........210.........220.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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