Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.83%DateTue Jul 30 13:19:15 BST 2013
Rank144Aligned Residues171
% Identity12%Templatec2c1oL_
PDB info PDB header:immune systemChain: L: PDB Molecule:igk-c protein; PDBTitle: enaiihis fab fragment in the free form
Resolution2.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60......
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Query Sequence  EFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQD. . . . . . . . . . . . . . . . . . . .
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Template Sequence  TLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTG
Template Known Secondary structure 


TTS
SS

B
TTS
B

TTS

TTT
TT

TT
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   10.........20.........30.........40.........50.........60.........
 
   67..70.........80.........90.........100.........110.........120...
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Query Sequence  . . . RSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEAT
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Template Sequence  SGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSE.
Template Known Secondary structure  TTSS

GGG

SSSS









B




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   65....70.........80.........90.........100.........110.........120...
 
   124.....130......... 140.........150.........160.... .....170.
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Query Sequence  NLAVGDKVEFLCEAHQ. GSLPIFYSFYINGEILGKPLAPSGR. . . . . . . . . . . AASLLAS
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Template Sequence  . QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT
Template Known Secondary structure  .TTBSS

SSS
B
SS



TTT

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   124.....130.........140.........150.........160.........170.........180..
 
   172.......180.........190.........200..
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Query Sequence  VKAEWSTKNYSCEAKNNISREISELKKFPLV
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Template Sequence  KDEYERHNSYTCEATHKTST. . . SPIVKSFN
Template Known Secondary structure  T
S
TT
S...S
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   183......190.........200.. .......210
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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