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Job DescriptionA1YIY0
Confidence99.87%DateTue Jul 30 13:19:15 BST 2013
Rank66Aligned Residues178
% Identity20%Templatec3pxjD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:tyrosine-protein phosphatase lar; PDBTitle: tandem ig repeats of dlar
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30. ........40.........50.........60.........70.
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Query Sequence  NPELTEFTNS. . . . ETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . . . .
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Template Sequence  PPEIIRKPQNQGVRVGGVASFYCAARGDPPP. . . . . SIVWRKNGKKVSGSRYTVLEQPGG
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TT


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TTS
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   35....40.........50.........60..... ....70.........80.........
 
   72.......80.........90.........100.........110.........120.......
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Query Sequence  . . . . VFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAV
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Template Conservation                                                              
Template Sequence  ISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEKTPAGFPVITQGPGTRVIEV
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TTTT
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T
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   92.......100.........110.........120.........130.........140.........150.
 
   128.130.........140.........150.........160.........170.........180.......
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Query Sequence  GDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKN
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Template Sequence  GHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDGFLQIENSREEDQGKYECVAEN
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SS

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TTSTTTT
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GGG

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   154.....160.........170.........180.........190.........200.........210...
 
   188.190.........200....
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Query Sequence  NISREISELKKFPLVVS
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Template Sequence  SMGTEHSKATNLYVKVR
Template Known Secondary structure  SS





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   214.....220.........230
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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