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Job DescriptionA1YIY0
Confidence99.85%DateTue Jul 30 13:19:15 BST 2013
Rank90Aligned Residues171
% Identity15%Templatec4fn0B_
PDB info PDB header:cell adhesionChain: B: PDB Molecule:poliovirus receptor-related protein 2; PDBTitle: crystal structure of mouse nectin-2 extracellular fragment d1-d2, 2nd2 crystal form
Resolution3.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.....
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Query Sequence  NPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQ. . . . . . . . . . . . . . . .
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Template Sequence  LPEVRGR. . . LGGTVELPCHLLPPTTERVSQVT. . WQRLDGTVVAAFHPSFGVDFPNSQF
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   3940..... ....50.........60........ .70.........80.........90...
 
   66...70.........80.........90.........100.........
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Query Sequence  . . . . . . . . . . . . . . . . DRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWT
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Template Sequence  SKDRLSFVRARPETNADLRDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQ.
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TTT



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B


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GGG
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   94.....100.........110.........120.........130.........140.........150..
 
   110.........120.........130.........140.........150.........160......
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Query Sequence  PVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSGRAA. . .
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Template Sequence  . . . . PENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQEPGIQAGTV
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BS


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   153......160.........170.........180.........190.........200........
 
   167..170.........180.........190.. .......200..
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Query Sequence  . . . . SLLASVKAEWSTKNYSCEAKNNISRE. ISELKKFPLV
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Template Sequence  TIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVR
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GGGTT

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   209210.........220.........230.........240.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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