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Job DescriptionA1YIY0
Confidence99.94%DateTue Jul 30 13:19:15 BST 2013
Rank9Aligned Residues161
% Identity16%Templatec3o3uN_
PDB info PDB header:transport protein, signaling proteinChain: N: PDB Molecule:maltose-binding periplasmic protein, advanced glycosylation PDBTitle: crystal structure of human receptor for advanced glycation endproducts2 (rage)
Resolution1.50 Å
Model Dimensions (Å)X:84.481 Y:43.699 Z:32.932

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   26...30.........40. ........50.........60.......
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Query Sequence  TEFTNSETMDVILKCT. IKVDPKNPTLQLFYTFYKNNHVIQDR. . . . . . . . . . . . . . . . .
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Template Sequence  QNITARIGEPLVLKCKGAPKKPPQ. . . . . RLEWKLNTGRTEAWKVLSPQGGGPWDSVARV
Template Known Secondary structure  TTS


TT

SSSS
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S

SSGGGGTS
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   1024.....1030.........1040....... ..1050.........1060.........1070........
 
   68.70.........80.........90.........100.........110.........120......
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Query Sequence  . SPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLA
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Template Sequence  LPNGSLFLPAVGIQDEGIFRCQAMNRNGK. . ETKSNYRVRVYQIPGKPEIVDSASELTAG
Template Known Secondary structure 
TTS
SS

GGG

TTS
..B




S

S
TT
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   10791080.........1090.........1100....... ..1110.........1120.........1130......
 
   127..130.........140.........150.........160... ......170.
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Query Sequence  VGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. . . . . . . . . . . . . . . RAASLLAS
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Template Sequence  VPNKV. GTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSELMVT
Template Known Secondary structure  S
.BS

TT

TTSTT
TTT


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   1137..1140. ........1150.........1160.........1170.........1180.........1190.....
 
   172..... ..180.........190....
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Query Sequence  VKAEWS. TKNYSCEAKNNISREIS
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Template Sequence  PARGGDPRPTFSCSFSPGLPRHRA
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   1196...1200.........1210.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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