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Job DescriptionA1YIY0
Confidence99.89%DateTue Jul 30 13:19:15 BST 2013
Rank51Aligned Residues167
% Identity16%Templatec4hjjH_
PDB info PDB header:immune systemChain: H: PDB Molecule:anti-il12 anti-il18 dfab heavy chain; PDBTitle: structure reveals function of the dual variable domain immunoglobulin2 (dvd-ig) molecule
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.
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Query Sequence  NSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VKPTQTLTLTCTFSGFSLSKSVM. GVSWIRQPPGKALEWLAHIYWDDDKYYNPSLSARLT
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TTS

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   12.......20.........30.... .....40.........50.........60.........70
 
   62.......70.........80.........90.........100........
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Query Sequence  . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFW. . . . . . . . . . . .
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Template Sequence  ISKDTSKNQVVLTMTNMDPVDTATYYCARRGIRSAMDYWGQGTTVTVSSASTKGPEVQLV
Template Known Secondary structure 
SSSS
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   71........80.........90.........100.........110.........120.........130
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  QSGTEVKKPGESLKISCKGSGYTVTSYWIGWVRQMPGKGLEWMGFIYPGDSETRYSPTFQ
Template Known Secondary structure 



TT

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   131........140.........150.........160.........170.........180.........190
 
   109110........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TPVSHPVLTL
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Template Sequence  GQVTISADKSFNTAFLQWSSLKASDTAMYYCARVGSGWYPYTFDIWGQGTMVTVSSASTK
Template Known Secondary structure  TTBTTTTSS

GGG

SSSSTTS



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B
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   191........200.........210.........220.........230.........240.........250
 
   119120.........130.........140.... .....150.........160... ......170
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Query Sequence  QHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSG. . . . . . . RAASLLA
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Template Sequence  GPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVT
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BSS

GGGTB
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   251........260.........270.........280.........290.........300.........310
 
   171........180.........190.......
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Query Sequence  SVKAEWSTKNYSCEAKNNISREISELK
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Template Conservation        
 
 


 
 
          
Template Sequence  VPSSSLGTQTYICNVNHKPSNTKVDKK
Template Known Secondary structure  TTTTTTS

GGGT
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   318.320.........330.........340....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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