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Job DescriptionA1YIY0
Confidence99.92%DateTue Jul 30 13:19:15 BST 2013
Rank26Aligned Residues173
% Identity11%Templatec3rbsA_
PDB info PDB header:contractile proteinChain: A: PDB Molecule:myomesin-1; PDBTitle: crystal structure of the myomesin domains 10 and 11
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70. .
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Query Sequence  ELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDRSPHS. . . . . . . . . . . V
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Template Sequence  SELAVEILEKGQVRFWMQAEKLSGNAKVN. . . . YIFNEKEIFEGPKYKMHIDRNTGIIEM
Template Known Secondary structure 
GGG

S


S

....TT
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TTT
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   1248.1250.........1260.........1270...... ...1280.........1290.........1300...
 
   73......80.........90.........100.........110.... .....120
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Query Sequence  FSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHP. . . . . . . . . . . . VLTLQH
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Template Sequence  FMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY
Template Known Secondary structure  S


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TT
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   1304.....1310.........1320.........1330.........1340.........1350.........1360...
 
   121........130.........140.........150.........160... ......170........
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Query Sequence  EATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. . RAASLLASVKAEWST
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Template Sequence  LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDA
Template Known Secondary structure  TTTS

TT
TT







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   1364.....1370.........1380.........1390.........1400.........1410.........1420...
 
   179180.........190.........200.
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Query Sequence  KNYSCEAKNNISREISELKKFPL
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Template Sequence  GIYEVILKDDRGKDKSR. LKLVD
Template Known Secondary structure  TT.

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   1424.....1430.........1440 .....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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