Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.75%DateTue Jul 30 13:19:15 BST 2013
Rank323Aligned Residues165
% Identity14%Templatec3eo1A_
PDB info PDB header:immune system/cytokineChain: A: PDB Molecule:gc-1008 fab light chain; PDBTitle: structure of the fab fragment of gc-1008 in complex with2 transforming growth factor-beta 3
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30 .........40.........50.........60.......
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Query Sequence  PELTEFTN. . . . SETMDVILKCTIKVDPKNPTLQLFYTFYKNNHVIQDR. . . . . . . . . . .
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Template Sequence  TVLTQSPGTLSLSPGERATLSCRASQSLGSSYLA. . . . WYQQKPGQAPRLLIYGASSRAP
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   2.......10.........20.........30..... ....40.........50.......
 
   68.70.........80.........90.........100.........110.....
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Query Sequence  . . . . . . . . . . . . SPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPV
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Template Sequence  GIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYADSPITFGQGTRLEIKRTVAAPSVF
Template Known Secondary structure  T

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GGG
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   58.60.........70.........80.........90.........100.........110.......
 
   116...120.........130.........140.... .....150.........160....
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Query Sequence  LTLQHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSGR. . . . . . . . . .
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Template Sequence  IFPPSDE. . QLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYS
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   118.120.... .....130.........140.........150.........160.........170.....
 
   165....170.........180.........190...
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Query Sequence  . AASLLASVKAEWSTKNYSCEAKNNISREI
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Template Sequence  LSSTLTLSKADYEKHKVYACEVTHQGLSSP
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   176...180.........190.........200.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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