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Job DescriptionA1YIY0
Confidence99.73%DateTue Jul 30 13:19:15 BST 2013
Rank344Aligned Residues165
% Identity9%Templatec3bn9F_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:e2 fab heavy chain; PDBTitle: crystal structure of mt-sp1 in complex with fab inhibitor e2
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.
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Query Sequence  FTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GLVKPGGSLRLSCAASGFTFSSYA. . . MSWVRQAPGKGLEWVSAISGSGGSTYYADSVKG
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GGGS
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   10.........20.........30... ......40.........50.........60......
 
   62.......70.........80.........90.........100.........110.......
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Query Sequence  . . . . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLT
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Template Sequence  RFTISRDNSKNTLYLQMSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTV
Template Known Secondary structure  TTTTT
S

GGG


SSTTS



SS




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   66...70.........80.........90.........100.........110.........120.....
 
   118.120.. .......130.........140.........150.........160...
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Query Sequence  LQHEA. . . . . . TNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSG. . . . . . . .
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Template Sequence  SSASTKGPSVFPLAPSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLY
Template Known Secondary structure 
SS

B





SBSS

GGGT

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   112.......120.........130.........140.........150.........160.........170.
 
   164.....170.........180.........190.....
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Query Sequence  RAASLLASVKAEWSTKNYSCEAKNNISREISE
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Template Sequence  SLSSVVTVPSSSLGTQTYICNVNHKPSNTKVD
Template Known Secondary structure  STTTTT

TTTT
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   177..180.........190.........200........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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