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Job DescriptionA1YIY0
Confidence99.83%DateTue Jul 30 13:19:15 BST 2013
Rank142Aligned Residues157
% Identity14%Templatec2wbjH_
PDB info PDB header:immune systemChain: H: PDB Molecule:ob tcr; PDBTitle: tcr complex
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60
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Query Sequence  EFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKN. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  WVISKSGTSVKIECRSLDFQAT. . . . . TMFWYRQFPKQSLMLMATSNEGSKATYEQGVEK
Template Known Secondary structure  TTS
SSS
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SSS

SSS


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   32.......40.........50... ......60.........70.........80......
 
   61........70.........80.........90........ .100.........110
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Query Sequence  . . . NHVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQK. . . . . . . KSGYLDIQFWTP
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Template Conservation                
 
  
   
 
 
 
 
    
                       
Template Sequence  DKFLINHASLTLSTLTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNV
Template Known Secondary structure  TS
SSSSS

GGG
TT
BTS




S
GGG
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   87..90.........100.........110.........120.........130.........140......
 
   111........120.........130.........140.... .....150.........160....
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Query Sequence  VSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSGR. . . . .
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Template Sequence  FPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQ
Template Known Secondary structure  B




S

BSS
TT

TT
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   147..150.........160.........170.........180.........190.........200......
 
   165....170.........180 ........
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Query Sequence  . . . . . . . . . . AASLLASVKAEWSTKN. YSCEAKNN
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Template Conservation         

  
 
 
           
 
 
   
Template Sequence  PALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFY
Template Known Secondary structure  TTSTT



STTTTSTT

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   207..210.........220.........230.........240.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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