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Job DescriptionA1YIY0
Confidence99.87%DateTue Jul 30 13:19:15 BST 2013
Rank71Aligned Residues177
% Identity13%Templatec3v2aR_
PDB info PDB header:hormone/signaling proteinChain: R: PDB Molecule:vascular endothelial growth factor receptor 2; PDBTitle: vegfr-2/vegf-a complex structure
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.... .....60.........70.........80.
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Query Sequence  LTEFTNSETMDVILKCTIKVDPKNPTLQLF. . . YTFYKNNHVIQDRSPHSVFSAEAKEEN
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Template Sequence  VVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISY
Template Known Secondary structure  SS






S
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TTTGGGTTT
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   135....140.........150.........160.........170.........180.........190....
 
   82.......90.........100.........110.........120.........130.........140.
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Query Sequence  SGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEATNLAVGDKVEFLCEAHQGS
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Template Sequence  AGMVFCEAKINDES. . YQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTEL
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T
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   195....200........ .210.........220.........230.........240.........250..
 
   142.......150.........160.........170.........180.........190.........200.
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Query Sequence  LPIFYSFYINGEILGKPLAPSGRAASLLASVKAEWSTKNYSCEAKNNISREISELKKFPL
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Template Sequence  NVGIDFNWEYPLVNRDLSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLM. TKKNSTFVRV
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   253......260.........270.........280.........290.........300. ........310.
 
   202..
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Query Sequence  VVS
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Template Sequence  HEK
Template Known Secondary structure 

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   325..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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