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Job DescriptionA1YIY0
Confidence99.73%DateTue Jul 30 13:19:15 BST 2013
Rank343Aligned Residues168
% Identity18%Templatec4f33H_
PDB info PDB header:immune systemChain: H: PDB Molecule:morab-009 fab heavy chain; PDBTitle: crystal structure of therapeutic antibody morab-009
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60
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Query Sequence  PNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKN. . . . . . . . . . . . . . . . . . . .
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Template Sequence  SGPEL. . . . EKPGASVKISCKASGYSFTGYT. . . MNWVKQSHGKSLEWIGLITPYNGASS
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TT

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GGGS...TTTTTTT
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   7..10. ........20.........30... ......40.........50.........
 
   61........70.........80.........90...... ...100........
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Query Sequence  . . . . . . . . . . NHVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLI. . QKKSGYLDIQFW
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Template Sequence  YNQKFRGKATLTVDKSSSTAYMDLLSLTSEDSAVYFCARGGYDGRGFDYWGSGTPVTVSS
Template Known Secondary structure 
GGGBTTTTTT
S

GGG

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S
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   60.........70.........80.........90.........100.........110.........
 
   109110.........120.........130.........140.... .....150.........160...
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Query Sequence  TPVSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSG. . . .
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Template Sequence  ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSS
Template Known Secondary structure  S

B




GGGTTBSS

GGGTB
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TT
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   120.........130.........140.........150.........160.........170.........
 
   164.....170.........180.........190.....
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Query Sequence  . . . RAASLLASVKAEWSTKNYSCEAKNNISREISE
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Template Sequence  GLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVD
Template Known Secondary structure  S
GGGTTT


GGGT
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   180.........190.........200.........210....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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