Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.74%DateTue Jul 30 13:19:15 BST 2013
Rank332Aligned Residues166
% Identity13%Templatec1hxmF_
PDB info PDB header:immune systemChain: F: PDB Molecule:gamma-delta t-cell receptor; PDBTitle: crystal structure of a human vgamma9/vdelta2 t cell receptor
Resolution3.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.
Predicted Secondary structure 













...................
Query SS confidence 








































. . . . . . . . . . . . . . . . . . .
Query Sequence  PNPELTEFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . .
Query Conservation 
 
 
      

  


 
     
               ...................
Alig confidence 







...



















...






...................
Template Conservation   
   

 ... 
  
 
 
           ...
 
 
                     
Template Sequence  PQISSTKT. . . LSKTARLECVVSGITISATS. . . VYWYRERPGEVIQFLVSISYDGTVRK
Template Known Secondary structure 

S...TT

SS
GGGS
...
TTS


TTS
Template Predicted Secondary structure 


...










...












Template SS confidence 



























































   7..10.... .....20.........30.... .....40.........50.........60
 
   62.......70.........80.........90.........100.........110
Predicted Secondary structure  ...........























Query SS confidence  . . . . . . . . . . .
















































Query Sequence  . . . . . . . . . . . HVIQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTP
Query Conservation  ...........          
 
  
   
 
 
 
 
 
                   
Alig confidence  ...........
















































Template Conservation                       
 
  
   
 
 
 
 
                     
Template Sequence  ESGIPSGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLI
Template Known Secondary structure 
TT

TTSTTTT
S

GGG

SSTT



Template Predicted Secondary structure 



























Template SS confidence 



























































   61........70.........80.........90.........100.........110.........120
 
   111........120.........130.........140.... .....150.........160
Predicted Secondary structure  .........















.





Query SS confidence  . . . . . . . . .

































.















Query Sequence  . . . . . . . . . VSHPVLTLQHEATNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLA
Query Conservation  .........              
  
    
 
         .   
 
 
        
Alig confidence  .........

































.















Template Conservation                                                              
Template Sequence  ITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWEEKKSNTILGSQ
Template Known Secondary structure  SS


S

S
B






GGGGGTTS
SS

TTT





Template Predicted Secondary structure 



































Template SS confidence 



























































   121........130.........140.........150.........160.........170.........180
 
   161.. ......170.........180.........190..
Predicted Secondary structure 
.......








Query SS confidence 


. . . . . . .




























Query Sequence  PSG. . . . . . . RAASLLASVKAEWSTKNYSCEAKNNISRE
Query Conservation     .......    
 
  
   
 
 
 
 
 
  
  
Alig confidence 


.......




























Template Conservation                
 
 
        
 
 
       
Template Sequence  EGNTMKTNDTYMKFSWLTVPEKSLDKEHRCIVRHENNKN
Template Known Secondary structure 



SSS
TGGGGS
TTSGG
Template Predicted Secondary structure 










Template SS confidence 






































   181........190.........200.........210.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D