Return to main results Retrieve Phyre Job Id

Job DescriptionA1YIY0
Confidence99.74%DateTue Jul 30 13:19:15 BST 2013
Rank337Aligned Residues165
% Identity15%Templatec1xcqA_
PDB info PDB header:immune systemChain: A: PDB Molecule:monoclonal antibody 19d9d6 light chain; PDBTitle: complex hcv core-fab 19d9d6-protein l mutant (d55a,l57h,y64w) in space2 group p21
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50 .........60. ..
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Query Sequence  FTNSETMDVILKCTIKVDPKNPT. LQLFYTFYKNN. . . . . . . . . . . . . . . . . . . . . . . HV
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Template Sequence  LAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKVLIYWASTRESGVPDRFTG
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SS

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TTT
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   11........20.........30.........40.........50.........60.........70
 
   64.....70.........80.........90.........100.........110.........120...
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Query Sequence  IQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKKSGYLDIQFWTPVSHPVLTLQHEAT
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Template Sequence  RGSGTDFTLTISSVQAEDQAVYYCKQAYIPPLTFG. AGTKLELKRADAAPTVSIFPPSSE
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GGG


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   71........80.........90.........100..... ....110.........120.........
 
   124.....130.........140.........150.........160.... .....170..
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Query Sequence  NLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSGR. . . . . . . . . . . AASLLASV
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Template Sequence  QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTK
Template Known Secondary structure  SSS

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S
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   130.........140.........150.........160.........170.........180.........
 
   173......180.........190...
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Query Sequence  KAEWSTKNYSCEAKNNISREI
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Template Sequence  DEYERHNSYTCEATHKTSTSP
Template Known Secondary structure  S

BB

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   190.........200.........210
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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