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Job DescriptionA1YIY0
Confidence99.83%DateTue Jul 30 13:19:15 BST 2013
Rank124Aligned Residues164
% Identity11%Templatec3mj9L_
PDB info PDB header:immune systemChain: L: PDB Molecule:stimulatory hamster antibody hl4e10 fab light chain; PDBTitle: crystal structure of jaml in complex with the stimulatory antibody2 hl4e10
Resolution2.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60. ..
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Query Sequence  EFTNSETMDVILKCTIKVDPKNPTLQLFYTFYKNN. . . . . . . . . . . . . . . . . . . . . . . HV
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Template Sequence  LVSVALGQKATITCSGDKLSDVYVH. . . . . WYQQKAGQAPVLVIYEDNRRPSGIPDHFSG
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BTT


TTGGGS

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TT


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TT
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   910.........20.........30... ......40.........50.........60...
 
   64.....70.........80.........90......... 100.........110.........120..
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Query Sequence  IQDRSPHSVFSAEAKEENSGLYQCMVDTEDGLIQKK. SGYLDIQFWTPVSHPVLTLQHEA
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Template Sequence  SNSGNMATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPS
Template Known Secondary structure  TT
S

GGG
TTTTB



B









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   65....70.........80.........90.........100.........110.........120....
 
   123......130.........140.... .....150.........160.... .....170..
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Query Sequence  TNLAVGDKVEFLCEAHQGSLPI. FYSFYINGEILGKPLAPSGR. . . . . . . . . AASLLASV
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Template Sequence  SEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTA
Template Known Secondary structure  TTTSSS

TT
TT


TT
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   122.......130.........140.........150.........160.........170.........180.
 
   173......180.........190.....
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Query Sequence  KAEWSTKNYSCEAKNNISREISE
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Template Sequence  DAWKSRNTFICKVTHGGNTVEKS
Template Known Secondary structure  T
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   184.....190.........200......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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