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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3alpB_

Fold library idPDB HeaderMoleculeTitle
c3alpB_PDB header: cell adhesionChain: B: PDB Molecule: poliovirus receptor-related protein 1;PDBTitle: cell adhesion protein


Added to library: Sat Feb 19 09:27:21 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRP
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Known secondary structure (DSSP)


S
TT



B
S


SS
SSS
TTT
TTGGGTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATC
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Known secondary structure (DSSP)
SSB


S

GGG
TTB


SS

SS



 .........150.........160.........170.........180.........190.........200.........210
Sequence TSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLN
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Known secondary structure (DSSP) BS

SS


TTS



GGGTT
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence VQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTLFFKGPINYSLAG
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Known secondary structure (DSSP)


S

BTT

SS


TTBS

TT
TT
S


GGG
 .........290.........300....
Sequence TYICEATNPIGTRSGQVEVNITEA
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Known secondary structure (DSSP)
SS


B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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