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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1hzhK_

Fold library idPDB HeaderMoleculeTitle
c1hzhK_PDB header: immune systemChain: K: PDB Molecule: immunoglobulin heavy chain;PDBTitle: crystal structure of the intact human igg b12 with broad2 and potent activity against primary hiv-1 isolates: a3 template for hiv vaccine design


Added to library: Tue Mar 16 12:46:00 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QVQLVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTF
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Known secondary structure (DSSP)





TT
SS
GGGS

TTS
TTTT
TTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAP
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Known secondary structure (DSSP) TTTTS

STT





TTS
TTTT
S





S


B



B

 .........150.........160.........170.........180.........190.........200.........210
Sequence STAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPS
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Known secondary structure (DSSP)


BBSS

B

BTTTT

TT



TTT
GGGTTT


TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NTKVDKKAEPKSCDKCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
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Known secondary structure (DSSP) T



TT











S





TTS


SS



T
 .........290.........300.........310.........320.........330.........340.........350
Sequence GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYT
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Known secondary structure (DSSP) T






TTS


TT


TT
SS




S

B

 .........360.........370.........380.........390.........400.........410.........420
Sequence LPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQG
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Known secondary structure (DSSP)


GGGGGSSBSS

TT






TTS
TT
 .........430.........440....
Sequence NVFSCSVMHEALHNHYTQKSLSLS
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Known secondary structure (DSSP)


TTSGGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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