PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c1i1cB_

Fold library id	PDB Header	Molecule	Title
c1i1cB_	PDB header: immune system	Chain: B: PDB Molecule: ig gamma-2a chain c region;	PDBTitle: non-fcrn binding fc fragment of rat igg2a

Links to external resources
Added to library: Tue Mar 16 12:08:48 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S V F I F P P K T K D V L G G G L T P K V T C V V V D I S Q N D P E V R F S W F I D D V E V H T A Q T H A P E K Q S N S T L R S V S E L P I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S
T T
S S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V E R D W L N G K T F K C K V N S G A F P A P I E K S I S K P E G T P R G P Q V Y T M A P P K E E M T Q S Q V S I T C M V K G F Y P P D I Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S S S
S
B
G G G G G S S B S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . .

Sequence T E W K M N G Q P Q E N Y K N T P P T M D T D G S Y F L Y S K L N V K K E T W Q Q G N T F T C S V L H E G L E N E H T E K S L S H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
T T S
T T
T T S G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	V	F	I	F	P	P	K	T	K	D	V	L	G	G	G	L	T	P	K	V	T	C	V	V	V	D	I	S	Q	N	D	P	E	V	R	F	S	W	F	I	D	D	V	E	V	H	T	A	Q	T	H	A	P	E	K	Q	S	N	S	T	L	R	S	V	S	E	L	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	S	S	S													T	T											S	S															T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	E	R	D	W	L	N	G	K	T	F	K	C	K	V	N	S	G	A	F	P	A	P	I	E	K	S	I	S	K	P	E	G	T	P	R	G	P	Q	V	Y	T	M	A	P	P	K	E	E	M	T	Q	S	Q	V	S	I	T	C	M	V	K	G	F	Y	P	P	D	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T										S	S	S	S	S											S			B											G	G	G	G	G	S	S												B	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Sequence	T	E	W	K	M	N	G	Q	P	Q	E	N	Y	K	N	T	P	P	T	M	D	T	D	G	S	Y	F	L	Y	S	K	L	N	V	K	K	E	T	W	Q	Q	G	N	T	F	T	C	S	V	L	H	E	G	L	E	N	E	H	T	E	K	S	L	S	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T				S	S										T	T	S																	T	T										T	T	S	G	G	G