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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1z7zI_

Fold library idPDB HeaderMoleculeTitle
c1z7zI_PDB header: virus/receptorChain: I: PDB Molecule: intercellular adhesion molecule-1;PDBTitle: cryo-em structure of human coxsackievirus a21 complexed2 with five domain icam-1kilifi


Added to library: Tue Mar 16 13:45:57 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QTSVSPSKVILPRGGSVLVTCSTSCDQPMLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCP
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Known secondary structure (DSSP)

SSTT

SS



SSS


SSTTT
S
B

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence DGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPA
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Known secondary structure (DSSP) T
B

S



S
TTS

B
GGGTT

TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence EVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVC
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Known secondary structure (DSSP)

SS
SS

GGGTS








SS



STTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTI
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Known secondary structure (DSSP) S
TTGGG
TT


TT

GGG
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YSFPAPNVILTKPEVSEGTEVTVKCEAGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVL
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Known secondary structure (DSSP)




S
STT








GGGTT
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRDLEGTYLCRARSTQ
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Known secondary structure (DSSP)

STTS
STT






S

TTT

TTS


GGG
TT
 .........430....
Sequence GEVTREVTVNVLSP
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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