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Emaill.a.kelley@imperial.ac.uk
DescriptionGood_intensive
DateSun Sep 7 16:58:53 BST 2014
Unique Job IDd4a1f7b1ec99b495
SequenceGDSWLKKFTE ... Download FASTA
Job Expiry

Final Model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:62.784 Y:64.549 Z:51.964
Confidence Summary
1 
 200
201 
Confidence Key
High(9)                    Low (0)
 
92% of residues modelled at >90% confidence (Details)
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3cf1C_
100.0 15
PDB header:transport protein
Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97/vcp in complex with adp/adp.alfx
2c3cf2B_
99.9 20
PDB header:transport protein
Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97/vcp in complex with adp/amp-pnp
3c3hu2C_
99.9 17
PDB header:transport protein
Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase;
PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs
4c4b4tH_
99.9 14
PDB header:hydrolase
Chain: H: PDB Molecule:26s protease regulatory subunit 7 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
5c4b4tK_
99.9 13
PDB header:hydrolase
Chain: K: PDB Molecule:26s protease regulatory subunit 6b homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
6c4b4tJ_
99.9 14
PDB header:hydrolase
Chain: J: PDB Molecule:26s protease regulatory subunit 8 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
7c4b4tI_
99.9 12
PDB header:hydrolase
Chain: I: PDB Molecule:26s protease regulatory subunit 4 homolog;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
8c4b4tL_
99.9 13
PDB header:hydrolase
Chain: L: PDB Molecule:26s protease subunit rpt4;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
9c4b4tM_
99.9 17
PDB header:hydrolase
Chain: M: PDB Molecule:26s protease regulatory subunit 6a;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
10c2dhrC_
99.9 16
PDB header:hydrolase
Chain: C: PDB Molecule:ftsh;
PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l)
11c1s3sA_
99.9 18
PDB header:protein binding
Chain: A: PDB Molecule:transitional endoplasmic reticulum atpase (ter
PDBTitle: crystal structure of aaa atpase p97/vcp nd1 in complex with2 p47 c
12c2zamA_
99.9 15
PDB header:protein transport
Chain: A: PDB Molecule:vacuolar protein sorting-associating protein 4b;
PDBTitle: crystal structure of mouse skd1/vps4b apo-form
13c1xwiA_
99.9 15
PDB header:protein transport
Chain: A: PDB Molecule:skd1 protein;
PDBTitle: crystal structure of vps4b
14c3zw6B_
99.8 13
PDB header:photosynthesis
Chain: B: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase activase 1,
PDBTitle: model of hexameric aaa domain arrangement of green-type2 rubisco activase from tobacco.
15c1iy2A_
99.8 16
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh;
PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus
16d2ce7a2
99.8 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
17c3eihB_
99.8 18
PDB header:protein transport
Chain: B: PDB Molecule:vacuolar protein sorting-associated protein 4;
PDBTitle: crystal structure of s.cerevisiae vps4 in the presence of atpgammas
18c4l16A_
99.8 16
PDB header:hydrolase
Chain: A: PDB Molecule:fidgetin-like protein 1;
PDBTitle: crystal structure of figl-1 aaa domain in complex with adp
19d1ixza_
99.8 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
20c3b9pA_
99.8 17
PDB header:hydrolase
Chain: A: PDB Molecule:cg5977-pa, isoform a;
PDBTitle: spastin
21c2r65A_
not modelled 99.8 16
PDB header:hydrolase
Chain: A: PDB Molecule:cell division protease ftsh homolog;
PDBTitle: crystal structure of helicobacter pylori atp dependent protease, ftsh2 adp complex
22c2ce7B_
not modelled 99.8 16
PDB header:cell division protein
Chain: B: PDB Molecule:cell division protein ftsh;
PDBTitle: edta treated
23c3d8bB_
not modelled 99.8 17
PDB header:hydrolase
Chain: B: PDB Molecule:fidgetin-like protein 1;
PDBTitle: crystal structure of human fidgetin-like protein 1 in complex with adp
24c2x8aA_
not modelled 99.8 13
PDB header:nuclear protein
Chain: A: PDB Molecule:nuclear valosin-containing protein-like;
PDBTitle: human nuclear valosin containing protein like (nvl), c-2 terminal aaa-atpase domain
25c3vfdA_
not modelled 99.8 16
PDB header:hydrolase
Chain: A: PDB Molecule:spastin;
PDBTitle: human spastin aaa domain
26c2qz4A_
not modelled 99.8 13
PDB header:hydrolase
Chain: A: PDB Molecule:paraplegin;
PDBTitle: human paraplegin, aaa domain in complex with adp
27c3h4mC_
not modelled 99.8 15
PDB header:hydrolase
Chain: C: PDB Molecule:proteasome-activating nucleotidase;
PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase
28c4lcbA_
not modelled 99.8 14
PDB header:protein transport
Chain: A: PDB Molecule:cell division protein cdvc, vps4;
PDBTitle: structure of vps4 homolog from acidianus hospitalis
29d1e32a2
not modelled 99.7 17
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
30d1r7ra3
not modelled 99.7 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
31d1lv7a_
not modelled 99.7 15
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
32c1qvrB_
not modelled 99.7 9
PDB header:chaperone
Chain: B: PDB Molecule:clpb protein;
PDBTitle: crystal structure analysis of clpb
33c3pxiB_
not modelled 99.6 6
PDB header:protein binding
Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb;
PDBTitle: structure of meca108:clpc
34c4ciuA_
not modelled 99.6 12
PDB header:chaperone
Chain: A: PDB Molecule:chaperone protein clpb;
PDBTitle: crystal structure of e. coli clpb
35c1nsfA_
not modelled 99.6 9
PDB header:protein transport
Chain: A: PDB Molecule:n-ethylmaleimide sensitive factor;
PDBTitle: d2 hexamerization domain of n-ethylmaleimide sensitive factor (nsf)
36c1r6bX_
not modelled 99.6 10
PDB header:hydrolase
Chain: X: PDB Molecule:clpa protein;
PDBTitle: high resolution crystal structure of clpa
37d1d2na_
not modelled 99.6 9
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
38c4d2qC_
not modelled 99.5 11
PDB header:chaperone
Chain: C: PDB Molecule:clpb;
PDBTitle: negative-stain electron microscopy of e. coli clpb2 mutant e432a (bap form bound to clpp)
39c3sylB_
not modelled 99.5 11
PDB header:chaperone
Chain: B: PDB Molecule:protein cbbx;
PDBTitle: crystal structure of the aaa+ protein cbbx, native structure
40d1r6bx3
not modelled 99.5 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
41d1oz4a3
not modelled 99.5 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
42d1in4a2
not modelled 99.5 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
43c1sxjA_
not modelled 99.4 12
PDB header:replication
Chain: A: PDB Molecule:activator 1 95 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
44c3pfiB_
not modelled 99.4 13
PDB header:hydrolase
Chain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate
45d1ofha_
not modelled 99.4 17
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
46d1qvra3
not modelled 99.4 9
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
47d1iqpa2
not modelled 99.4 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
48c2c9oA_
not modelled 99.4 16
PDB header:hydrolase
Chain: A: PDB Molecule:ruvb-like 1;
PDBTitle: 3d structure of the human ruvb-like helicase ruvbl1
49d1gvnb_
not modelled 99.4 15
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Plasmid maintenance system epsilon/zeta, toxin zeta subunit
50c1in8A_
not modelled 99.4 14
PDB header:dna binding protein
Chain: A: PDB Molecule:holliday junction dna helicase ruvb;
PDBTitle: thermotoga maritima ruvb t158v
51c2z4rB_
not modelled 99.4 9
PDB header:dna binding protein
Chain: B: PDB Molecule:chromosomal replication initiator protein dnaa;
PDBTitle: crystal structure of domain iii from the thermotoga2 maritima replication initiation protein dnaa
52c2chvE_
not modelled 99.4 14
PDB header:dna-binding protein
Chain: E: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c adpnp complex
53c3pxgA_
not modelled 99.4 17
PDB header:protein binding
Chain: A: PDB Molecule:negative regulator of genetic competence clpc/mecb;
PDBTitle: structure of meca121 and clpc1-485 complex
54d1jbka_
not modelled 99.3 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
55d1ixsb2
not modelled 99.3 11
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
56d1sxjb2
not modelled 99.3 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
57c2chgB_
not modelled 99.3 14
PDB header:dna-binding protein
Chain: B: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c domains 1 and 2
58d1sxja2
not modelled 99.3 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
59d1g41a_
not modelled 99.3 11
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
60d1w5sa2
not modelled 99.3 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
61c2hcbC_
not modelled 99.3 13
PDB header:replication
Chain: C: PDB Molecule:chromosomal replication initiator protein dnaa;
PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus
62c3uk6L_
not modelled 99.3 16
PDB header:hydrolase
Chain: L: PDB Molecule:ruvb-like 2;
PDBTitle: crystal structure of the tip48 (tip49b) hexamer
63d1l8qa2
not modelled 99.3 15
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
64c2r44A_
not modelled 99.3 11
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative atpase (chu_0153) from cytophaga2 hutchinsonii atcc 33406 at 2.00 a resolution
65c2p65A_
not modelled 99.3 22
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pf08_0063;
PDBTitle: crystal structure of the first nucleotide binding domain of2 chaperone clpb1, putative, (pv089580) from plasmodium vivax
66c3u5zM_
not modelled 99.3 12
PDB header:dna binding protein/dna
Chain: M: PDB Molecule:dna polymerase accessory protein 44;
PDBTitle: structure of t4 bacteriophage clamp loader bound to the t4 clamp,2 primer-template dna, and atp analog
67d1r6bx2
not modelled 99.3 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
68c1sxjE_
not modelled 99.3 10
PDB header:replication
Chain: E: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
69d1a5ta2
not modelled 99.3 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
70c3m6aC_
not modelled 99.3 13
PDB header:hydrolase
Chain: C: PDB Molecule:atp-dependent protease la 1;
PDBTitle: crystal structure of bacillus subtilis lon c-terminal domain
71d1sxje2
not modelled 99.3 9
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
72c3pvsA_
not modelled 99.2 17
PDB header:recombination
Chain: A: PDB Molecule:replication-associated recombination protein a;
PDBTitle: structure and biochemical activities of escherichia coli mgsa
73c3nbxX_
not modelled 99.2 13
PDB header:hydrolase
Chain: X: PDB Molecule:atpase rava;
PDBTitle: crystal structure of e. coli rava (regulatory atpase variant a) in2 complex with adp
74d1qvra2
not modelled 99.2 15
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
75d1sxjc2
not modelled 99.2 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
76c2p5tD_
not modelled 99.2 14
PDB header:transcription regulator
Chain: D: PDB Molecule:pezt;
PDBTitle: molecular and structural characterization of the pezat chromosomal2 toxin-antitoxin system of the human pathogen streptococcus pneumoniae
77d1um8a_
not modelled 99.2 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
78d1fnna2
not modelled 99.2 9
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
79d1njfa_
not modelled 99.2 11
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
80c2c9oC_
not modelled 99.2 14
PDB header:hydrolase
Chain: C: PDB Molecule:ruvb-like 1;
PDBTitle: 3d structure of the human ruvb-like helicase ruvbl1
81c1sxjC_
not modelled 99.2 11
PDB header:replication
Chain: C: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
82d1svma_
99.1 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
83c3te6A_
not modelled 99.1 5
PDB header:gene regulation
Chain: A: PDB Molecule:regulatory protein sir3;
PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain
84c1sxjB_
not modelled 99.1 13
PDB header:replication
Chain: B: PDB Molecule:activator 1 37 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
85c3bosA_
not modelled 99.1 10
PDB header:hydrolase regulator,dna binding protein
Chain: A: PDB Molecule:putative dna replication factor;
PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution
86c1iqpF_
not modelled 99.1 12
PDB header:replication
Chain: F: PDB Molecule:rfcs;
PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus
87d1sxjd2
not modelled 99.1 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
88c4gdfF_
not modelled 99.1 10
PDB header:hydrolase/dna
Chain: F: PDB Molecule:large t antigen;
PDBTitle: a crystal structure of sv40 large t antigen
89c1hqcB_
not modelled 99.0 13
PDB header:hydrolase
Chain: B: PDB Molecule:ruvb;
PDBTitle: structure of ruvb from thermus thermophilus hb8
90c3uk6H_
not modelled 99.0 13
PDB header:hydrolase
Chain: H: PDB Molecule:ruvb-like 2;
PDBTitle: crystal structure of the tip48 (tip49b) hexamer
91c3hteC_
not modelled 99.0 10
PDB header:motor protein
Chain: C: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx;
PDBTitle: crystal structure of nucleotide-free hexameric clpx
92c1sxjD_
not modelled 99.0 12
PDB header:replication
Chain: D: PDB Molecule:activator 1 41 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
93c1jr3E_
not modelled 98.9 12
PDB header:transferase
Chain: E: PDB Molecule:dna polymerase iii, delta' subunit;
PDBTitle: crystal structure of the processivity clamp loader gamma2 complex of e. coli dna polymerase iii
94d1g8pa_
not modelled 98.9 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
95c1xxhB_
not modelled 98.8 16
PDB header:transferase
Chain: B: PDB Molecule:dna polymerase iii subunit gamma;
PDBTitle: atpgs bound e. coli clamp loader complex
96c3ec2A_
not modelled 98.8 16
PDB header:replication
Chain: A: PDB Molecule:dna replication protein dnac;
PDBTitle: crystal structure of the dnac helicase loader
97c2kjqA_
not modelled 98.8 14
PDB header:replication
Chain: A: PDB Molecule:dnaa-related protein;
PDBTitle: solution structure of protein nmb1076 from neisseria meningitidis.2 northeast structural genomics consortium target mr101b.
98c1ojlD_
not modelled 98.8 15
PDB header:response regulator
Chain: D: PDB Molecule:transcriptional regulatory protein zrar;
PDBTitle: crystal structure of a sigma54-activator suggests the2 mechanism for the conformational switch necessary for3 sigma54 binding
99c1fnnB_
not modelled 98.8 8
PDB header:cell cycle
Chain: B: PDB Molecule:cell division control protein 6;
PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum
100c1w5sB_
not modelled 98.7 11
PDB header:replication
Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2;
PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form)
101c2v1uA_
not modelled 98.7 12
PDB header:replication
Chain: A: PDB Molecule:cell division control protein 6 homolog;
PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna
102c2w58B_
not modelled 98.7 16
PDB header:hydrolase
Chain: B: PDB Molecule:primosome component (helicase loader);
PDBTitle: crystal structure of the dnai
103d1ny5a2
not modelled 98.7 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
104d1e94e_
not modelled 98.7 8
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
105c2gxaA_
not modelled 98.6 13
PDB header:replication/dna
Chain: A: PDB Molecule:replication protein e1;
PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 with ssdna and mgadp
106c2qbyA_
not modelled 98.6 9
PDB header:replication/dna
Chain: A: PDB Molecule:cell division control protein 6 homolog 1;
PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus)
107c2qgzA_
not modelled 98.6 20
PDB header:hydrolase
Chain: A: PDB Molecule:putative primosome component;
PDBTitle: crystal structure of a putative primosome component from2 streptococcus pyogenes serotype m3. northeast structural3 genomics target dr58
108c2qbyB_
not modelled 98.5 11
PDB header:replication/dna
Chain: B: PDB Molecule:cell division control protein 6 homolog 3;
PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus)
109d1tuea_
not modelled 98.5 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
110d1ye8a1
not modelled 98.5 13
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
111c1ojlF_
not modelled 98.4 13
PDB header:response regulator
Chain: F: PDB Molecule:transcriptional regulatory protein zrar;
PDBTitle: crystal structure of a sigma54-activator suggests the2 mechanism for the conformational switch necessary for3 sigma54 binding
112c2c99A_
not modelled 98.4 13
PDB header:transcription regulation
Chain: A: PDB Molecule:psp operon transcriptional activator;
PDBTitle: structural basis of the nucleotide driven conformational2 changes in the aaa domain of transcription activator pspf
113c4m4wO_
not modelled 98.4 16
PDB header:replication
Chain: O: PDB Molecule:primosomal protein dnai;
PDBTitle: mechanistic implications for the bacterial primosome assembly of the2 structure of a helicase-helicase loader complex
114c3tlxA_
not modelled 98.1 13
PDB header:transferase
Chain: A: PDB Molecule:adenylate kinase 2;
PDBTitle: crystal structure of pf10_0086, adenylate kinase from plasmodium2 falciparum
115d1sq5a_
not modelled 98.1 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Phosphoribulokinase/pantothenate kinase
116d2gnoa2
not modelled 98.1 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
117c4akgB_
not modelled 98.1 19
PDB header:motor protein
Chain: B: PDB Molecule:glutathione s-transferase class-mu 26 kda isozyme, dynein
PDBTitle: dynein motor domain - atp complex
118c1zuiA_
not modelled 98.1 11
PDB header:transferase
Chain: A: PDB Molecule:shikimate kinase;
PDBTitle: structural basis for shikimate-binding specificity of helicobacter2 pylori shikimate kinase
119c3vkhB_
not modelled 98.1 14
PDB header:motor protein
Chain: B: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: x-ray structure of a functional full-length dynein motor domain
120c3umfA_
not modelled 98.0 18
PDB header:transferase
Chain: A: PDB Molecule:adenylate kinase;
PDBTitle: schistosoma mansoni adenylate kinase

Binding site prediction 

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Multi-template and ab initio information 

7 templates were selected to model your protein based on heuristics to maximise confidence, percentage identity and alignment coverage. Below is a table indicating where your sequence was covered by each template, colour-coded by the confidence of the match to that template overall.

27 residues were modelled by ab initio. Please note: ab initio modelling is highly unreliable.

 
TemplateConfidence1....................................................................................................
c3hu2C_99% 
   
c3cf1C_100% 
              
c4b4tK_99% 
               
c4b4tH_99% 
            
c4b4tJ_99% 
   
c3cf2B_99% 
d1svma_99% 
                                                                           
 
TemplateConfidence101....................................................................................................
c3hu2C_99%                                                                                                     
c3cf1C_100%                                              
                                                  
c4b4tK_99%                                                                                                     
c4b4tH_99%                                                                                                     
c4b4tJ_99%                                                                                                     
c3cf2B_99% 
                                                                                             
d1svma_99%                                                                              
                  
 
TemplateConfidence201....................................................................................................
c3hu2C_99%                                                                                                     
c3cf1C_100%                                                                                                     
c4b4tK_99%                                                                                                     
c4b4tH_99%                                                                                                     
c4b4tJ_99%                                                                                                     
c3cf2B_99%                                                                                                  
d1svma_99%                                                         
 
TemplateConfidence301.............................
c3hu2C_99%                            
c3cf1C_100%                            
c4b4tK_99%           
c4b4tH_99%                    
c4b4tJ_99%                    
c3cf2B_99% 
d1svma_99%