PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3uk6L_

Fold library id	PDB Header	Molecule	Title
c3uk6L_	PDB header: hydrolase	Chain: L: PDB Molecule: ruvb-like 2;	PDBTitle: crystal structure of the tip48 (tip49b) hexamer

Links to external resources
Added to library: Wed Jan 9 18:15:47 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D D A L E A A R R A A G V V L E M I R G R A V L I A G Q P G T G K T A I A M G M A Q A L T A I A G S E I F E M S K T E A L T Q A F R R V R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S S
G G G G
-

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S L H E I D V I N S R T E I K S E V R E Q I N A K V A E W R E I P G V L F I D E V H M L D I E S F S F L N R A L E S D M A P V L I M A T N R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
S G G G S B T T
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G I T R I R G T S Y Q S P H G I P I D L L D R L L I V S T T P Y S E K D T K Q I L R I R C E E E M S T R I G L E T S L R Y A I Q L S L V E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
B T S S
T T
T T
B
S
B

. . . . . . . . . 220 . . . . . . . . . 230 . . .

Sequence Q V D D I K R V Y S L F L D E S R S T Q Y M K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	D	A	L	E	A	A	R	R	A	A	G	V	V	L	E	M	I	R	G	R	A	V	L	I	A	G	Q	P	G	T	G	K	T	A	I	A	M	G	M	A	Q	A	L	T	A	I	A	G	S	E	I	F	E	M	S	K	T	E	A	L	T	Q	A	F	R	R	V	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																										T	T	S	S																	G	G	G	G																-
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	L	H	E	I	D	V	I	N	S	R	T	E	I	K	S	E	V	R	E	Q	I	N	A	K	V	A	E	W	R	E	I	P	G	V	L	F	I	D	E	V	H	M	L	D	I	E	S	F	S	F	L	N	R	A	L	E	S	D	M	A	P	V	L	I	M	A	T	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S																														S	G	G	G	S	B											T	T		T	T									S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	I	T	R	I	R	G	T	S	Y	Q	S	P	H	G	I	P	I	D	L	L	D	R	L	L	I	V	S	T	T	P	Y	S	E	K	D	T	K	Q	I	L	R	I	R	C	E	E	E	M	S	T	R	I	G	L	E	T	S	L	R	Y	A	I	Q	L	S	L	V	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					B	T	S	S					T	T							T	T																										B								S													B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Sequence	Q	V	D	D	I	K	R	V	Y	S	L	F	L	D	E	S	R	S	T	Q	Y	M	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S