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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1sxjE_

Fold library idPDB HeaderMoleculeTitle
c1sxjE_PDB header: replicationChain: E: PDB Molecule: activator 1 40 kda subunit;PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)


Added to library: Tue Mar 16 13:41:20 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRNVVSSP
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Known secondary structure (DSSP)
TTTT


SGGG

S
TTTT
TT




STTSSTS
TT





S
 .........80.........90.........100.........110.........120.........130.........140
Sequence YHLEITPSNDRIVIQELLKEVAQMEQRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPI
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Known secondary structure (DSSP) S




TTTT



TTSS
STTTS
S
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELA
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Known secondary structure (DSSP)
TTS




T


STT
TTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIILKELTFSLLDVETLNTTN
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Known secondary structure (DSSP)
SS







STTT

TTTT
TTS
 .........290.........300.........310.......
Sequence KSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVMCCLD
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Known secondary structure (DSSP) T
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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