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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1sxjD_

Fold library idPDB HeaderMoleculeTitle
c1sxjD_PDB header: replicationChain: D: PDB Molecule: activator 1 41 kda subunit;PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)


Added to library: Tue Mar 16 12:56:27 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILEL
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Known secondary structure (DSSP)
T

SSTTT

S

TTTT
TT



STTSSTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTR
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Known secondary structure (DSSP)
SSS


TTS





TTS


S
TTGGGS
TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FCLICNYVTRIIDPLASQCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLL
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Known secondary structure (DSSP) S
GGGS
S




TTT



TSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLH
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Known secondary structure (DSSP) T
S




T


SS

TS


TT
 .........290.........300.........310.........320........
Sequence EYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKISQL
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Known secondary structure (DSSP)
SSS
TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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