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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1sxjB_

Fold library idPDB HeaderMoleculeTitle
c1sxjB_PDB header: replicationChain: B: PDB Molecule: activator 1 37 kda subunit;PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)


Added to library: Tue Mar 16 14:23:39 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVL
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Known secondary structure (DSSP)



T

SSGGG

S
TS





STTSSGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence ELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQ
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Known secondary structure (DSSP)
TTS

ST





TT

SGGGS
TTTTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SNKIIEPLQSQCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGH
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Known secondary structure (DSSP) GGGS
TTS




T

B
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRL
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Known secondary structure (DSSP) SSB
TS

S
SSTTTTTT

T
TTS
 .........290.........300.........310......
Sequence EMIKEIGLTHMRILEGVGTYLQLASMLAKIHKLNNK
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Known secondary structure (DSSP) TT


TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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