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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3hu2C_

Fold library idPDB HeaderMoleculeTitle
c3hu2C_PDB header: transport proteinChain: C: PDB Molecule: transitional endoplasmic reticulum atpase;PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs


Added to library: Sat Aug 28 18:33:36 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEK
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Known secondary structure (DSSP)

GGGG




TT

SS

TT
TT

TT

STT

SSS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IRMNAVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDI
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Known secondary structure (DSSP)

TT

TT





BGGG

S

S
TTTT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVE
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Known secondary structure (DSSP) TTSSSS

S

B
T


GGG

S
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence LPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE
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Known secondary structure (DSSP)
T





STTSS
SSTS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG
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Known secondary structure (DSSP) SSSSGGGT
B
SSS


S
GGG

S
GGGB
GGGGSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID
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Known secondary structure (DSSP) SS





STTS
B
TT


TT

TTTS

 .........430.........440.........450..
Sequence LEDETIDAEVMNSLAVTMDDFRWALSQSNPSA
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Known secondary structure (DSSP) TTSSS



B






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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