PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2x8aA_

Fold library id	PDB Header	Molecule	Title
c2x8aA_	PDB header: nuclear protein	Chain: A: PDB Molecule: nuclear valosin-containing protein-like;	PDBTitle: human nuclear valosin containing protein like (nvl), c-2 terminal aaa-atpase domain

Links to external resources
Added to library: Sun Aug 29 02:50:53 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I G A L E D I R E E L T M A I L A P V R N P D Q F K A L G L V T P A G V L L A G P P G C G K T L L A K A V A N E S G L N F I S V K G P E L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S T T
S S S T T S
T T
T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N M Y V G E S E R A V R Q V F Q R A K N S A P C V I F F D E V D A L C P S V R V V N Q L L T E M D G L E A R Q Q V F I M A A T N R P D I I D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T T
S T
T T T
T T T
S T T
S
G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P A I L R P G R L D K T L F V G L P P P A D R L A I L K T I T K N G T K P P L D A D V N L E A I A G D L R C D C Y T G A D L S A L V R E A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T S S
S
T T T T B T T B B
T T
T
S G G G S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . .

Sequence I C A L R Q E M L K V S H K H F E E A F K K V R S S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	G	A	L	E	D	I	R	E	E	L	T	M	A	I	L	A	P	V	R	N	P	D	Q	F	K	A	L	G	L	V	T	P	A	G	V	L	L	A	G	P	P	G	C	G	K	T	L	L	A	K	A	V	A	N	E	S	G	L	N	F	I	S	V	K	G	P	E	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T					S							T	T					S						S	S	T	T	S													T	T								T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	M	Y	V	G	E	S	E	R	A	V	R	Q	V	F	Q	R	A	K	N	S	A	P	C	V	I	F	F	D	E	V	D	A	L	C	P	S	V	R	V	V	N	Q	L	L	T	E	M	D	G	L	E	A	R	Q	Q	V	F	I	M	A	A	T	N	R	P	D	I	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T																	T		S							T		T	T	T				T	T											T			S	T	T									S		G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	A	I	L	R	P	G	R	L	D	K	T	L	F	V	G	L	P	P	P	A	D	R	L	A	I	L	K	T	I	T	K	N	G	T	K	P	P	L	D	A	D	V	N	L	E	A	I	A	G	D	L	R	C	D	C	Y	T	G	A	D	L	S	A	L	V	R	E	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	T	T	S	S								S														T	T	T	T	B	T	T	B	B		T	T								T		S	G	G	G	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Sequence	I	C	A	L	R	Q	E	M	L	K	V	S	H	K	H	F	E	E	A	F	K	K	V	R	S	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											B										T	T