PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3bosA_

Fold library id	PDB Header	Molecule	Title
c3bosA_	PDB header: hydrolase regulator	Chain: A: PDB Molecule: putative dna replication factor;	PDBTitle: crystal structure of putative dna replication regulator hda2 (yp_927791.1) from shewanella amazonensis sb2b at 1.75 a3 resolution

Links to external resources
Added to library: Tue Mar 16 12:32:59 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L Q L S L P V H L P D D E T F T S Y Y P G N D E L I G A L K S A A S G D G V Q A I Y L W G P V K S G R T H L I H A A C A R A N E L E R R S F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T T S
T
S
S
S T T S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y I P L G I H A S I S T A L L E G L E Q F D L I C I D D V D A V A G H P L W E E A I F D L Y N R V A E Q K R G S L I V S A S A S P X E A G F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G G G S
G G G G T T G G G S S T G G G G T T
S
S S
T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V L P D L V S R X H W G L T Y Q L Q P X X D D E K L A A L Q R R A A X R G L Q L P E D V G R F L L N R X A R D L R T L F D V L D R L D K A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G T T
T T T

. . . . . . . . . 220 . . . . . . . .

Sequence X V H Q R K L T I P F V K E X L R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	Q	L	S	L	P	V	H	L	P	D	D	E	T	F	T	S	Y	Y	P	G	N	D	E	L	I	G	A	L	K	S	A	A	S	G	D	G	V	Q	A	I	Y	L	W	G	P	V	K	S	G	R	T	H	L	I	H	A	A	C	A	R	A	N	E	L	E	R	R	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T		S	T	T	T	S																	T		S		S							S	T	T	S	S															T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	I	P	L	G	I	H	A	S	I	S	T	A	L	L	E	G	L	E	Q	F	D	L	I	C	I	D	D	V	D	A	V	A	G	H	P	L	W	E	E	A	I	F	D	L	Y	N	R	V	A	E	Q	K	R	G	S	L	I	V	S	A	S	A	S	P	X	E	A	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	G	G	G	S		G	G	G	G	T	T	G	G	G	S	S						T	G	G	G	G	T	T																				S								S	S		T	T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	L	P	D	L	V	S	R	X	H	W	G	L	T	Y	Q	L	Q	P	X	X	D	D	E	K	L	A	A	L	Q	R	R	A	A	X	R	G	L	Q	L	P	E	D	V	G	R	F	L	L	N	R	X	A	R	D	L	R	T	L	F	D	V	L	D	R	L	D	K	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S										G	G	G												T	T															T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Sequence	X	V	H	Q	R	K	L	T	I	P	F	V	K	E	X	L	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T													T