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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3pfiB_

Fold library idPDB HeaderMoleculeTitle
c3pfiB_PDB header: hydrolaseChain: B: PDB Molecule: holliday junction atp-dependent dna helicase ruvb;PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate


Added to library: Sat Nov 20 09:20:01 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEXSANIKTTAAPXIEKSG
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Known secondary structure (DSSP)

STT

S
TT




SSTTSSTT

GGG

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DLAAILTNLSEGDILFIDEIHRLSPAIEEVLYPAXEDYPKFTLIGATTRAGXLSNPLRDRFGXQFRLEFY
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Known secondary structure (DSSP) T

TT
SGGG

T



S
GGGS
TT
S



 .........150.........160.........170.........180.........190.........200.........210
Sequence KDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPRIALRLLKRVRDFADVNDEEIITEKRANEALNSL
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Known secondary structure (DSSP)
TT

TTT
TT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence GVNELGFDAXDLRYLELLTAAKQKPIGLASIAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASAKSY
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Known secondary structure (DSSP) T

TT


TTT

B
TT

TTTTSTT
 ...
Sequence SAL
Predicted secondary structure

SS confidence


Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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