PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2p5tD_

Fold library id	PDB Header	Molecule	Title
c2p5tD_	PDB header: transcription regulator	Chain: D: PDB Molecule: pezt;	PDBTitle: molecular and structural characterization of the pezat2 chromosomal toxin-antitoxin system of the human pathogen3 streptococcus pneumoniae

Links to external resources
Added to library: Tue Mar 16 11:59:51 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M E I Q D Y T D S E F K H A L A R N L R S L T R G K K S S K Q P I A I L L G G Q S G A G K T T I H R I K Q K E F Q G N I V I I D G D S F R S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S S
S
T T S
T T T T
G G G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q H P H Y L E L Q Q E Y G K D S V E Y T K D F A G K M V E S L V T K L S S L G Y N L L I E G T L R T V D V P K K T A Q L L K N K G Y E V Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G S T T T T T T T
T T S S T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A L I A T K P E L S Y L S T L I R Y E E L Y I I N P N Q P K E H H D F I V N H L V D N T R K L E E L A I F E R I Q I Y Q R D R S C V Y D S K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T
T T
S
T T S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . .

Sequence E N T T S A A D V L Q E L F F G E W S Q V E K E M L Q V G E K R L N E L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	I	Q	D	Y	T	D	S	E	F	K	H	A	L	A	R	N	L	R	S	L	T	R	G	K	K	S	S	K	Q	P	I	A	I	L	L	G	G	Q	S	G	A	G	K	T	T	I	H	R	I	K	Q	K	E	F	Q	G	N	I	V	I	I	D	G	D	S	F	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																				T	T					S	S								S		T	T	S		T											T	T	T							G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	H	P	H	Y	L	E	L	Q	Q	E	Y	G	K	D	S	V	E	Y	T	K	D	F	A	G	K	M	V	E	S	L	V	T	K	L	S	S	L	G	Y	N	L	L	I	E	G	T	L	R	T	V	D	V	P	K	K	T	A	Q	L	L	K	N	K	G	Y	E	V	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S	T	T									T	T	T	T																							T									T	T	S	S												T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	L	I	A	T	K	P	E	L	S	Y	L	S	T	L	I	R	Y	E	E	L	Y	I	I	N	P	N	Q	P	K	E	H	H	D	F	I	V	N	H	L	V	D	N	T	R	K	L	E	E	L	A	I	F	E	R	I	Q	I	Y	Q	R	D	R	S	C	V	Y	D	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T	T				T	T	T																	T	T			S							T	T	S						T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Sequence	E	N	T	T	S	A	A	D	V	L	Q	E	L	F	F	G	E	W	S	Q	V	E	K	E	M	L	Q	V	G	E	K	R	L	N	E	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			S												S