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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2hcbC_

Fold library idPDB HeaderMoleculeTitle
c2hcbC_PDB header: replicationChain: C: PDB Molecule: chromosomal replication initiator protein dnaa;PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus


Added to library: Tue Mar 16 12:25:02 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYS
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Known secondary structure (DSSP)



TT

SSSS


TTTTTTTTTTS


SSSSSTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence SADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRH
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Known secondary structure (DSSP) T

T
S
GGGGTT
STT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PQKLDGVSDRLVSRFEGGILVEIELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTKNVREIEGKIKLI
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Known secondary structure (DSSP) GGG
TTS
S



STT





S
 .........220.........230.........240.........250.........260.........270.........280
Sequence KLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKNKRTSEARKIAMYLCRKVCSASLIEIARA
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Known secondary structure (DSSP) TTS
STTTTT
TGGGSS


SS



SSTTTS


TT
 .........290.........300.........310.......
Sequence FDHTTVIHAIRSVEEEKKRKFKHLVGFLEKQAFDKIC
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Known secondary structure (DSSP)


TTS



T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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